BLASTX nr result

ID: Coptis23_contig00010642 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010642
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632511.1| PREDICTED: fimbrin [Vitis vinifera] gi|14777...   123   2e-26
ref|XP_002523566.1| conserved hypothetical protein [Ricinus comm...   118   8e-25
ref|XP_002310149.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
ref|XP_002454597.1| hypothetical protein SORBIDRAFT_04g034056 [S...   108   8e-22
gb|AFW64360.1| EF hand family protein [Zea mays]                      105   9e-21

>ref|XP_003632511.1| PREDICTED: fimbrin [Vitis vinifera] gi|147776200|emb|CAN61147.1|
           hypothetical protein VITISV_029170 [Vitis vinifera]
          Length = 97

 Score =  123 bits (309), Expect = 2e-26
 Identities = 60/99 (60%), Positives = 75/99 (75%)
 Frame = +2

Query: 92  MAIMSRCIPMAPEHEMSVEEFKAWIARFDLDHDGNISREELEQALHSLHTWFAWWKARKG 271
           MAIM  CI   P  EM+V+EFKAW+ RFD D DG ISREEL++AL SL  WF WWKAR+G
Sbjct: 1   MAIMC-CIQAHPSAEMTVDEFKAWLRRFDSDRDGKISREELQEALCSLQVWFGWWKARQG 59

Query: 272 VKKSDVNRNRQIDTTSEEMDKLVVYAQKHLHMKIYEYDW 388
           +K++D + + +ID T +EM+KLV YAQ HLHMKI E +W
Sbjct: 60  MKEADTDHSGRIDNT-KEMEKLVQYAQHHLHMKISENNW 97


>ref|XP_002523566.1| conserved hypothetical protein [Ricinus communis]
           gi|223537128|gb|EEF38761.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 95

 Score =  118 bits (296), Expect = 8e-25
 Identities = 53/96 (55%), Positives = 75/96 (78%)
 Frame = +2

Query: 92  MAIMSRCIPMAPEHEMSVEEFKAWIARFDLDHDGNISREELEQALHSLHTWFAWWKARKG 271
           MAIM  C+ + P H+MSV EFKAW+ +FD+DHDG +SRE+L++AL S+  WFAWWK+R+ 
Sbjct: 1   MAIMC-CVQVQPSHDMSVNEFKAWLRQFDIDHDGRLSREDLKEALQSMSIWFAWWKSRQA 59

Query: 272 VKKSDVNRNRQIDTTSEEMDKLVVYAQKHLHMKIYE 379
           +K+ D +RN  ID   +E++KL+ YAQ+ LHMKI+E
Sbjct: 60  MKEVDTDRNGLID-NPKEIEKLIKYAQQRLHMKIHE 94


>ref|XP_002310149.1| predicted protein [Populus trichocarpa] gi|222853052|gb|EEE90599.1|
           predicted protein [Populus trichocarpa]
          Length = 99

 Score =  112 bits (281), Expect = 4e-23
 Identities = 52/95 (54%), Positives = 72/95 (75%)
 Frame = +2

Query: 92  MAIMSRCIPMAPEHEMSVEEFKAWIARFDLDHDGNISREELEQALHSLHTWFAWWKARKG 271
           MAIM  C  + P  EM+VE+FKAW+ +F++D+DG +S EEL++A+ SL  WF WWKAR+ 
Sbjct: 1   MAIMC-CFQLNPNREMTVEDFKAWLRQFEMDNDGRVSHEELKEAIQSLRVWFPWWKARQV 59

Query: 272 VKKSDVNRNRQIDTTSEEMDKLVVYAQKHLHMKIY 376
           +K +D N N QI+   EE++KLV YAQ+HLHMKI+
Sbjct: 60  MKVADTNHNGQIEGV-EEIEKLVNYAQQHLHMKIH 93


>ref|XP_002454597.1| hypothetical protein SORBIDRAFT_04g034056 [Sorghum bicolor]
           gi|241934428|gb|EES07573.1| hypothetical protein
           SORBIDRAFT_04g034056 [Sorghum bicolor]
          Length = 97

 Score =  108 bits (270), Expect = 8e-22
 Identities = 48/87 (55%), Positives = 65/87 (74%)
 Frame = +2

Query: 125 PEHEMSVEEFKAWIARFDLDHDGNISREELEQALHSLHTWFAWWKARKGVKKSDVNRNRQ 304
           PE E +VEEF+AW+++FD D DG ISR+ELEQAL SL+ WF WWKAR+ V+ +D NRN  
Sbjct: 11  PEGETTVEEFRAWLSQFDADGDGRISRDELEQALRSLNLWFVWWKAREAVRAADANRNGA 70

Query: 305 IDTTSEEMDKLVVYAQKHLHMKIYEYD 385
           +D   +EM +L  +A KHLH+K+ + D
Sbjct: 71  VD--GDEMGRLYAFAHKHLHLKMSQLD 95


>gb|AFW64360.1| EF hand family protein [Zea mays]
          Length = 102

 Score =  105 bits (261), Expect = 9e-21
 Identities = 46/83 (55%), Positives = 63/83 (75%)
 Frame = +2

Query: 125 PEHEMSVEEFKAWIARFDLDHDGNISREELEQALHSLHTWFAWWKARKGVKKSDVNRNRQ 304
           P+ E +VEEF+AW+++FD D DG ISREELE+AL SL+ WF WWKAR+ V+ +D NRN  
Sbjct: 11  PQGETTVEEFRAWLSQFDADGDGRISREELERALRSLNLWFVWWKAREAVRAADANRNGA 70

Query: 305 IDTTSEEMDKLVVYAQKHLHMKI 373
           +D   +EM +L  +A KHLH+K+
Sbjct: 71  VD--GDEMGRLYAFAHKHLHLKM 91


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