BLASTX nr result

ID: Coptis23_contig00010635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010635
         (1501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADU02586.1| pectate lyase-like protein 1 [Vitis vinifera]          589   e-166
gb|ADU02588.1| pectate lyase-like protein 3 [Vitis vinifera]          588   e-165
ref|XP_002268818.1| PREDICTED: probable pectate lyase 12 [Vitis ...   588   e-165
ref|XP_002265853.1| PREDICTED: probable pectate lyase 12 [Vitis ...   588   e-165
ref|XP_002316399.1| predicted protein [Populus trichocarpa] gi|2...   585   e-164

>gb|ADU02586.1| pectate lyase-like protein 1 [Vitis vinifera]
          Length = 496

 Score =  589 bits (1519), Expect = e-166
 Identities = 289/396 (72%), Positives = 317/396 (80%)
 Frame = -1

Query: 1396 NLTLLHQHPNPESVVLEVQRRVNVSISRRQALGVSEKGQXXXXSCPTGNPIDDCWKCDST 1217
            NLTL HQHPNPE VV EVQRR+NVSISRRQ L V E       SC TGNP+DDCW+CD  
Sbjct: 27   NLTLPHQHPNPEVVVDEVQRRLNVSISRRQVLSVQEND---GSSCLTGNPVDDCWRCDP- 82

Query: 1216 NWANNRQRLADCSIGFGQDALGGKGGQIYQVTDSSDNDPVNPTPGTLRYAVIQDDPLWIV 1037
            NW NNRQRLADC IGFGQDA+GGKGGQ Y VTDSSD DP+NP PGTLR+AVIQ  PLWI 
Sbjct: 83   NWQNNRQRLADCGIGFGQDAMGGKGGQFYVVTDSSDEDPINPAPGTLRHAVIQTQPLWIT 142

Query: 1036 FSGNMLITLKEELIVNSYKTIDGRGANVHIVGGGCITIQYVSXXXXXXXXXXHCVPSPVA 857
            FS NMLI LK ELIVNS+KTIDGRGANVHI G GC+T+QYVS          HCVPS  A
Sbjct: 143  FSTNMLIKLKYELIVNSFKTIDGRGANVHITGRGCMTLQYVSNVIIHGVHVHHCVPSGNA 202

Query: 856  NVRSSTTHYGRRTXXXXXXXXXXXXXXIWIDHCSLSYCTDGLIDAIMGSSGITISNNYFS 677
            ++RSS TH G R               IWIDHCSLSYC DGLIDAIMGS+GITISNNYFS
Sbjct: 203  DIRSSPTHVGWRGKSDGDGISIFGSRKIWIDHCSLSYCRDGLIDAIMGSTGITISNNYFS 262

Query: 676  HHDEVMLLGHSDDYIPDSGMQVTIAFNHFGEALIQRMPRCRRGYFHVVNNDFTQWEMYAI 497
            HHDEVMLLGH D Y PDSGMQVTIAFNHFGE L+QRMPRCRRGY HVVNNDFT+WEMYAI
Sbjct: 263  HHDEVMLLGHDDKYSPDSGMQVTIAFNHFGEGLVQRMPRCRRGYIHVVNNDFTRWEMYAI 322

Query: 496  GGSGNPTINSQGNRYTAPSDPNAKEVTKRVETKDGEWSDWDWRSDGDEMVNGAFFVPSGS 317
            GGS NPTINSQGNRYTAP D NAKEVTKRVET + +W++W+WR++GD MVNGAFFVPSG 
Sbjct: 323  GGSANPTINSQGNRYTAPGDINAKEVTKRVETDEEDWAEWNWRTEGDVMVNGAFFVPSGV 382

Query: 316  GVGMKYSKASSVEPKSAGLIDRLTMNAGVMGGNRDN 209
            G+  +Y+KASSVEPKSA LI +LTMNAG + G+RD+
Sbjct: 383  GLSTQYAKASSVEPKSAALIQQLTMNAGALSGSRDD 418


>gb|ADU02588.1| pectate lyase-like protein 3 [Vitis vinifera]
          Length = 489

 Score =  588 bits (1516), Expect = e-165
 Identities = 291/401 (72%), Positives = 325/401 (81%), Gaps = 1/401 (0%)
 Frame = -1

Query: 1408 ATPF-NLTLLHQHPNPESVVLEVQRRVNVSISRRQALGVSEKGQXXXXSCPTGNPIDDCW 1232
            ATP  NLTLL QHP+PE+VV EVQRRVNVS+SRRQ L VS+  Q     C TGNPIDDCW
Sbjct: 40   ATPMQNLTLLGQHPDPEAVVQEVQRRVNVSVSRRQTLEVSQSDQSSS--CVTGNPIDDCW 97

Query: 1231 KCDSTNWANNRQRLADCSIGFGQDALGGKGGQIYQVTDSSDNDPVNPTPGTLRYAVIQDD 1052
            +CD  NW  +RQRLADC+IGFGQ ALGGKGGQIY VTDSSD+D V P PGTLRYAVIQ D
Sbjct: 98   RCDP-NWEADRQRLADCAIGFGQYALGGKGGQIYVVTDSSDHDAVTPRPGTLRYAVIQSD 156

Query: 1051 PLWIVFSGNMLITLKEELIVNSYKTIDGRGANVHIVGGGCITIQYVSXXXXXXXXXXHCV 872
            PLWIVF+ NMLI L +ELI NSYKT+DGRGANVHIVGGGCIT+QY+S          HCV
Sbjct: 157  PLWIVFATNMLIKLSQELIFNSYKTLDGRGANVHIVGGGCITLQYISNVIIHNIHIHHCV 216

Query: 871  PSPVANVRSSTTHYGRRTXXXXXXXXXXXXXXIWIDHCSLSYCTDGLIDAIMGSSGITIS 692
             S  ANVRSS THYG RT              IWIDHCSLS+C DGLIDA+MGS+GITIS
Sbjct: 217  QSGEANVRSSPTHYGWRTLSDGDGISIFGSRDIWIDHCSLSHCKDGLIDAVMGSTGITIS 276

Query: 691  NNYFSHHDEVMLLGHSDDYIPDSGMQVTIAFNHFGEALIQRMPRCRRGYFHVVNNDFTQW 512
            NN+FSHHDEVMLLGHSD Y+PDSGMQVTIAFNHFGE L+QRMPRCRRGY HVVNNDFT+W
Sbjct: 277  NNFFSHHDEVMLLGHSDSYVPDSGMQVTIAFNHFGEQLVQRMPRCRRGYIHVVNNDFTRW 336

Query: 511  EMYAIGGSGNPTINSQGNRYTAPSDPNAKEVTKRVETKDGEWSDWDWRSDGDEMVNGAFF 332
            EMYAIGGSG+PTINSQGNRYTAPS+ NAKEVTKRV+T + +W DW+WRS+GD +VNGAFF
Sbjct: 337  EMYAIGGSGSPTINSQGNRYTAPSNRNAKEVTKRVDTDEKKWRDWNWRSEGDILVNGAFF 396

Query: 331  VPSGSGVGMKYSKASSVEPKSAGLIDRLTMNAGVMGGNRDN 209
            + SG  V + Y KA SVEPKSA LID+LT NAGV+GG+ +N
Sbjct: 397  IASGETVEVLYEKAYSVEPKSAALIDQLTTNAGVLGGSGNN 437


>ref|XP_002268818.1| PREDICTED: probable pectate lyase 12 [Vitis vinifera]
            gi|296085972|emb|CBI31413.3| unnamed protein product
            [Vitis vinifera]
          Length = 496

 Score =  588 bits (1516), Expect = e-165
 Identities = 289/396 (72%), Positives = 316/396 (79%)
 Frame = -1

Query: 1396 NLTLLHQHPNPESVVLEVQRRVNVSISRRQALGVSEKGQXXXXSCPTGNPIDDCWKCDST 1217
            NLTL HQHPNPE VV EVQRR+NVSISRRQ L V E       SC TGNP+DDCW+CD  
Sbjct: 27   NLTLPHQHPNPEVVVDEVQRRLNVSISRRQVLSVQEND---GSSCLTGNPVDDCWRCDP- 82

Query: 1216 NWANNRQRLADCSIGFGQDALGGKGGQIYQVTDSSDNDPVNPTPGTLRYAVIQDDPLWIV 1037
            NW NNRQRLADC IGFG DA+GGKGGQ Y VTDSSD DP+NP PGTLR+AVIQ  PLWI 
Sbjct: 83   NWQNNRQRLADCGIGFGLDAMGGKGGQFYVVTDSSDEDPINPAPGTLRHAVIQTQPLWIT 142

Query: 1036 FSGNMLITLKEELIVNSYKTIDGRGANVHIVGGGCITIQYVSXXXXXXXXXXHCVPSPVA 857
            FS NMLI LK ELIVNS+KTIDGRGANVHI G GC+T+QYVS          HCVPS  A
Sbjct: 143  FSTNMLIKLKYELIVNSFKTIDGRGANVHITGRGCMTLQYVSNVIIHGVHVHHCVPSGNA 202

Query: 856  NVRSSTTHYGRRTXXXXXXXXXXXXXXIWIDHCSLSYCTDGLIDAIMGSSGITISNNYFS 677
            ++RSS TH G R               IWIDHCSLSYC DGLIDAIMGS+GITISNNYFS
Sbjct: 203  DIRSSPTHVGWRGKSDGDGISIFGSRKIWIDHCSLSYCRDGLIDAIMGSTGITISNNYFS 262

Query: 676  HHDEVMLLGHSDDYIPDSGMQVTIAFNHFGEALIQRMPRCRRGYFHVVNNDFTQWEMYAI 497
            HHDEVMLLGH D Y PDSGMQVTIAFNHFGE L+QRMPRCRRGY HVVNNDFTQWEMYAI
Sbjct: 263  HHDEVMLLGHDDKYSPDSGMQVTIAFNHFGEGLVQRMPRCRRGYIHVVNNDFTQWEMYAI 322

Query: 496  GGSGNPTINSQGNRYTAPSDPNAKEVTKRVETKDGEWSDWDWRSDGDEMVNGAFFVPSGS 317
            GGS NPTINSQGNRYTAP D NAKEVTKRVET + +W++W+WR++GD MVNGAFFVPSG 
Sbjct: 323  GGSANPTINSQGNRYTAPGDINAKEVTKRVETDEEDWAEWNWRTEGDVMVNGAFFVPSGV 382

Query: 316  GVGMKYSKASSVEPKSAGLIDRLTMNAGVMGGNRDN 209
            G+  +Y+KASSVEPKSA LI +LTMNAG + G+RD+
Sbjct: 383  GLSTQYAKASSVEPKSAALIQQLTMNAGALSGSRDD 418


>ref|XP_002265853.1| PREDICTED: probable pectate lyase 12 [Vitis vinifera]
          Length = 583

 Score =  588 bits (1516), Expect = e-165
 Identities = 291/401 (72%), Positives = 325/401 (81%), Gaps = 1/401 (0%)
 Frame = -1

Query: 1408 ATPF-NLTLLHQHPNPESVVLEVQRRVNVSISRRQALGVSEKGQXXXXSCPTGNPIDDCW 1232
            ATP  NLTLL QHP+PE+VV EVQRRVNVS+SRRQ L VS+  Q     C TGNPIDDCW
Sbjct: 134  ATPMQNLTLLGQHPDPEAVVQEVQRRVNVSVSRRQTLEVSQSDQSSS--CVTGNPIDDCW 191

Query: 1231 KCDSTNWANNRQRLADCSIGFGQDALGGKGGQIYQVTDSSDNDPVNPTPGTLRYAVIQDD 1052
            +CD  NW  +RQRLADC+IGFGQ ALGGKGGQIY VTDSSD+D V P PGTLRYAVIQ D
Sbjct: 192  RCDP-NWEADRQRLADCAIGFGQYALGGKGGQIYVVTDSSDHDAVTPRPGTLRYAVIQSD 250

Query: 1051 PLWIVFSGNMLITLKEELIVNSYKTIDGRGANVHIVGGGCITIQYVSXXXXXXXXXXHCV 872
            PLWIVF+ NMLI L +ELI NSYKT+DGRGANVHIVGGGCIT+QY+S          HCV
Sbjct: 251  PLWIVFATNMLIKLSQELIFNSYKTLDGRGANVHIVGGGCITLQYISNVIIHNIHIHHCV 310

Query: 871  PSPVANVRSSTTHYGRRTXXXXXXXXXXXXXXIWIDHCSLSYCTDGLIDAIMGSSGITIS 692
             S  ANVRSS THYG RT              IWIDHCSLS+C DGLIDA+MGS+GITIS
Sbjct: 311  QSGEANVRSSPTHYGWRTLSDGDGISIFGSRDIWIDHCSLSHCKDGLIDAVMGSTGITIS 370

Query: 691  NNYFSHHDEVMLLGHSDDYIPDSGMQVTIAFNHFGEALIQRMPRCRRGYFHVVNNDFTQW 512
            NN+FSHHDEVMLLGHSD Y+PDSGMQVTIAFNHFGE L+QRMPRCRRGY HVVNNDFT+W
Sbjct: 371  NNFFSHHDEVMLLGHSDSYVPDSGMQVTIAFNHFGEQLVQRMPRCRRGYIHVVNNDFTRW 430

Query: 511  EMYAIGGSGNPTINSQGNRYTAPSDPNAKEVTKRVETKDGEWSDWDWRSDGDEMVNGAFF 332
            EMYAIGGSG+PTINSQGNRYTAPS+ NAKEVTKRV+T + +W DW+WRS+GD +VNGAFF
Sbjct: 431  EMYAIGGSGSPTINSQGNRYTAPSNRNAKEVTKRVDTDEKKWRDWNWRSEGDILVNGAFF 490

Query: 331  VPSGSGVGMKYSKASSVEPKSAGLIDRLTMNAGVMGGNRDN 209
            + SG  V + Y KA SVEPKSA LID+LT NAGV+GG+ +N
Sbjct: 491  IASGETVEVLYEKAYSVEPKSAALIDQLTTNAGVLGGSGNN 531


>ref|XP_002316399.1| predicted protein [Populus trichocarpa] gi|222865439|gb|EEF02570.1|
            predicted protein [Populus trichocarpa]
          Length = 415

 Score =  585 bits (1508), Expect = e-164
 Identities = 282/399 (70%), Positives = 317/399 (79%)
 Frame = -1

Query: 1411 QATPFNLTLLHQHPNPESVVLEVQRRVNVSISRRQALGVSEKGQXXXXSCPTGNPIDDCW 1232
            + T FNLTL HQHP+PE+V  +V+RRVN S+SRR  L + EK Q     C TGNPIDDCW
Sbjct: 23   ETTAFNLTLPHQHPDPEAVAEDVKRRVNASLSRRHLLSIQEKDQ-----CQTGNPIDDCW 77

Query: 1231 KCDSTNWANNRQRLADCSIGFGQDALGGKGGQIYQVTDSSDNDPVNPTPGTLRYAVIQDD 1052
            +C+S NWANNRQRLADC+IGFGQ +LGG+GGQIY VTDSSD DP NP PGTLRY VIQD 
Sbjct: 78   RCNS-NWANNRQRLADCAIGFGQGSLGGRGGQIYVVTDSSDYDPANPKPGTLRYGVIQDQ 136

Query: 1051 PLWIVFSGNMLITLKEELIVNSYKTIDGRGANVHIVGGGCITIQYVSXXXXXXXXXXHCV 872
            PLWI+FS NM+I LK ELI NSYKTIDGRGANVHI G GCIT+QYVS          HC 
Sbjct: 137  PLWIIFSSNMVIKLKHELIFNSYKTIDGRGANVHITGNGCITLQYVSHIIIHNIHVHHCK 196

Query: 871  PSPVANVRSSTTHYGRRTXXXXXXXXXXXXXXIWIDHCSLSYCTDGLIDAIMGSSGITIS 692
            PS   N+ +S TH G R               IWIDHCSLSYCTDGLIDAIMGS+GITIS
Sbjct: 197  PSGNTNIAASPTHVGWRGRSDGDGISIFGAQKIWIDHCSLSYCTDGLIDAIMGSTGITIS 256

Query: 691  NNYFSHHDEVMLLGHSDDYIPDSGMQVTIAFNHFGEALIQRMPRCRRGYFHVVNNDFTQW 512
            NN+F+HHDEVMLLGH D Y  D+GMQVTIAFNHFG+ L+QRMPRCRRGY HVVNNDFT W
Sbjct: 257  NNHFTHHDEVMLLGHDDKYALDTGMQVTIAFNHFGQGLVQRMPRCRRGYIHVVNNDFTAW 316

Query: 511  EMYAIGGSGNPTINSQGNRYTAPSDPNAKEVTKRVETKDGEWSDWDWRSDGDEMVNGAFF 332
            EMYAIGGS NPTINSQGNRYTAP+D NAKEVTKRV+T +G+W+ W+WR+DGD MVNGAFF
Sbjct: 317  EMYAIGGSANPTINSQGNRYTAPTDDNAKEVTKRVDTNEGDWAGWNWRTDGDIMVNGAFF 376

Query: 331  VPSGSGVGMKYSKASSVEPKSAGLIDRLTMNAGVMGGNR 215
            VPSG+G+  +YSKASSVEPKSAGLI +LT+NAGV G  R
Sbjct: 377  VPSGAGLSAQYSKASSVEPKSAGLIQQLTLNAGVFGDPR 415


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