BLASTX nr result
ID: Coptis23_contig00010627
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00010627 (299 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABQ85945.1| MADS-box transcription factor FUL-like 2 [Trochod... 58 7e-07 gb|AFP65775.1| SQUA-like protein 3, partial [Iris fulva] 55 5e-06 emb|CAN69615.1| hypothetical protein VITISV_016762 [Vitis vinifera] 55 8e-06 gb|AAP83404.1| FRUITFULL-like MADS-box [Ranunculus bulbosus] 55 8e-06 >gb|ABQ85945.1| MADS-box transcription factor FUL-like 2 [Trochodendron aralioides] Length = 243 Score = 58.2 bits (139), Expect = 7e-07 Identities = 28/54 (51%), Positives = 37/54 (68%) Frame = -3 Query: 282 NNMESILEHYQQYSHTSKDVVASDLESQGSLSFEYNKLKSRFETLYEEI*HGFG 121 ++ME ILE Y++YS+ +++VA D ESQGS S EY KLK+RFE L H G Sbjct: 61 SSMERILERYERYSYAERELVAIDAESQGSWSLEYTKLKARFEVLQRNQRHFLG 114 >gb|AFP65775.1| SQUA-like protein 3, partial [Iris fulva] Length = 163 Score = 55.5 bits (132), Expect = 5e-06 Identities = 26/53 (49%), Positives = 36/53 (67%) Frame = -3 Query: 279 NMESILEHYQQYSHTSKDVVASDLESQGSLSFEYNKLKSRFETLYEEI*HGFG 121 +ME ILE Y++YS+ + + +DLESQG+ S EY KLK+RFE L + H G Sbjct: 62 SMEKILERYERYSYAERAITMTDLESQGNWSHEYGKLKARFENLQKSQRHLMG 114 >emb|CAN69615.1| hypothetical protein VITISV_016762 [Vitis vinifera] Length = 228 Score = 54.7 bits (130), Expect = 8e-06 Identities = 24/45 (53%), Positives = 34/45 (75%) Frame = -3 Query: 282 NNMESILEHYQQYSHTSKDVVASDLESQGSLSFEYNKLKSRFETL 148 N+ME ILE Y++Y++ ++A+DLESQGS + EY KLK+R E L Sbjct: 102 NSMERILERYERYAYAQSQLIATDLESQGSWTLEYAKLKARMEVL 146 >gb|AAP83404.1| FRUITFULL-like MADS-box [Ranunculus bulbosus] Length = 214 Score = 54.7 bits (130), Expect = 8e-06 Identities = 29/52 (55%), Positives = 34/52 (65%) Frame = -3 Query: 276 MESILEHYQQYSHTSKDVVASDLESQGSLSFEYNKLKSRFETLYEEI*HGFG 121 ME ILE Y +YS TS ++VA+D ESQ LS EYNKLKS+ E L H G Sbjct: 33 MEGILERYXRYSXTSTELVAADPESQECLSMEYNKLKSKAEALQRSQRHFMG 84