BLASTX nr result

ID: Coptis23_contig00010621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010621
         (1435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAO91858.1| putative lysine decarbxylase [Nicotiana tabacum]      385   e-104
ref|XP_002529033.1| carboxy-lyase, putative [Ricinus communis] g...   380   e-103
ref|XP_002276560.1| PREDICTED: uncharacterized protein LOC100243...   376   e-102
ref|XP_004151464.1| PREDICTED: probable cytokinin riboside 5'-mo...   372   e-100
ref|XP_002311733.1| predicted protein [Populus trichocarpa] gi|2...   370   e-100

>emb|CAO91858.1| putative lysine decarbxylase [Nicotiana tabacum]
          Length = 305

 Score =  385 bits (990), Expect = e-104
 Identities = 192/277 (69%), Positives = 219/277 (79%), Gaps = 7/277 (2%)
 Frame = -2

Query: 1227 LNNSHQKNSM--KKMDKQTSKFKFLKPR--GRSGRVFMCKSE---FEERTSPDEVKKEIQ 1069
            L +SHQK  M    + K+T +F    P+   +S   F CKSE   FEERTSP EVKKEI 
Sbjct: 18   LRSSHQKEVMLGSCLRKETWRFNLNLPKLNYQSRNSFCCKSESIDFEERTSPYEVKKEID 77

Query: 1068 NCYALIRKLGRGVVYLGSSRMGPGHPHYMQTVELAREIGNLLDCTTWTGVGPGLMDAATK 889
             CY LI +LGRG VYLGSSRMGP HPHY++T EL  +I  LLDCTTW+G GPGLMDAAT+
Sbjct: 78   QCYELIHRLGRGAVYLGSSRMGPEHPHYIKTFELGSKIATLLDCTTWSGAGPGLMDAATQ 137

Query: 888  GALQAKKPVGGFKIGREAGEWTTSQFHPYLPSETYLTCRFFSARKHGLVDAAMRCAASDR 709
            GALQA KPVGGFKIGREAGEWT S FHPYLPSE+YLTCRFFSARKHGLVDA +RC +S+R
Sbjct: 138  GALQAGKPVGGFKIGREAGEWTASNFHPYLPSESYLTCRFFSARKHGLVDAVVRCKSSER 197

Query: 708  TAVIALPGGVGTLDEMFEILALIQLERVGSEHPVPFLVMNYDLFYSKLLAFFDDCEDWGT 529
            TAV+ALPGG+GTLDE+FEI+ALIQLER+GS+ PVPFL+MNYD FYS LL F +DCE WGT
Sbjct: 198  TAVVALPGGIGTLDEIFEIMALIQLERIGSQLPVPFLLMNYDSFYSNLLEFLNDCEKWGT 257

Query: 528  VSEGEVGSLWKVCNGNTEALEYLREFYSCS*SKTEGK 418
            VS+ EV SLWKVCN N+EAL YL EFY  S  +T  K
Sbjct: 258  VSKNEVSSLWKVCNNNSEALAYLTEFYGLSPVETGRK 294


>ref|XP_002529033.1| carboxy-lyase, putative [Ricinus communis]
            gi|223531513|gb|EEF33344.1| carboxy-lyase, putative
            [Ricinus communis]
          Length = 302

 Score =  380 bits (975), Expect = e-103
 Identities = 188/292 (64%), Positives = 221/292 (75%), Gaps = 9/292 (3%)
 Frame = -2

Query: 1272 MGVSLFNFTGWSAIRLNNSHQKNSMKKMDKQTSKF------KFLKPRGRSGRVFMCKSE- 1114
            MG  L    G S + + N ++KN   +   +  +F      +  K +    R+ +CKSE 
Sbjct: 1    MGFPLVGSLG-SHVLVRNLYEKNIKLQSFDENGRFGVNFSLRCSKSKPFPKRISLCKSEL 59

Query: 1113 --FEERTSPDEVKKEIQNCYALIRKLGRGVVYLGSSRMGPGHPHYMQTVELAREIGNLLD 940
              FEERTSP+E++KEI+ CY LI +LGRGVVYLGSSRMGP HPHY+Q +EL+RE+  LLD
Sbjct: 60   VDFEERTSPNEIRKEIERCYELIHRLGRGVVYLGSSRMGPDHPHYLQALELSREVAKLLD 119

Query: 939  CTTWTGVGPGLMDAATKGALQAKKPVGGFKIGREAGEWTTSQFHPYLPSETYLTCRFFSA 760
            CT+W G GPGLMDA  KGALQA KPVGGFKI +EAGEWT S FHPYLPSETYLTCRFFSA
Sbjct: 120  CTSWMGAGPGLMDATIKGALQAGKPVGGFKIAKEAGEWTASNFHPYLPSETYLTCRFFSA 179

Query: 759  RKHGLVDAAMRCAASDRTAVIALPGGVGTLDEMFEILALIQLERVGSEHPVPFLVMNYDL 580
            RKHGLVDAA+R   SDRTAV+ALPGG+GTLDEMFEILALIQLER+GS  PVPF+VMNYD 
Sbjct: 180  RKHGLVDAAVRNTRSDRTAVVALPGGIGTLDEMFEILALIQLERIGSALPVPFIVMNYDS 239

Query: 579  FYSKLLAFFDDCEDWGTVSEGEVGSLWKVCNGNTEALEYLREFYSCS*SKTE 424
            FY KLL F  +CEDWGTVS+GEV  LWK+CN N+EAL YL +FY+   S  E
Sbjct: 240  FYQKLLDFIQNCEDWGTVSKGEVTPLWKICNSNSEALAYLTDFYNLHSSSDE 291


>ref|XP_002276560.1| PREDICTED: uncharacterized protein LOC100243479 [Vitis vinifera]
            gi|297737525|emb|CBI26726.3| unnamed protein product
            [Vitis vinifera]
          Length = 310

 Score =  376 bits (965), Expect = e-102
 Identities = 190/270 (70%), Positives = 212/270 (78%), Gaps = 10/270 (3%)
 Frame = -2

Query: 1227 LNNSHQKNSMKKM-----DKQTSKFKF--LKPRGRSGRVFMCKSEF---EERTSPDEVKK 1078
            L NSHQ+            +QT  FKF  LKP     R+ +CK EF   EERTSP+EV+K
Sbjct: 11   LRNSHQRTVRFAPFSGGERRQTLSFKFSELKPHN-PWRILVCKGEFVEFEERTSPNEVRK 69

Query: 1077 EIQNCYALIRKLGRGVVYLGSSRMGPGHPHYMQTVELAREIGNLLDCTTWTGVGPGLMDA 898
            EI+ CY LI KLGRGVVYLGSSRMGP H HY+Q +EL RE+ NLLDCT+WTG GPGLMDA
Sbjct: 70   EIEQCYELINKLGRGVVYLGSSRMGPDHSHYLQALELGREVANLLDCTSWTGAGPGLMDA 129

Query: 897  ATKGALQAKKPVGGFKIGREAGEWTTSQFHPYLPSETYLTCRFFSARKHGLVDAAMRCAA 718
            A+KGALQA KPVGGFKIGREAG+ T   FHPYLPSETY TCRFFSARKHGLVDAA+R   
Sbjct: 130  ASKGALQAGKPVGGFKIGREAGQQTALSFHPYLPSETYFTCRFFSARKHGLVDAAVRSCN 189

Query: 717  SDRTAVIALPGGVGTLDEMFEILALIQLERVGSEHPVPFLVMNYDLFYSKLLAFFDDCED 538
             DRTAV+ALPGG+GTLDE+FEILALIQL+R+GSE PVPFL+MNYD FYSKLL F  D E 
Sbjct: 190  CDRTAVVALPGGIGTLDEVFEILALIQLQRIGSELPVPFLLMNYDSFYSKLLDFLSDSEC 249

Query: 537  WGTVSEGEVGSLWKVCNGNTEALEYLREFY 448
            WGTV +GEV SLWKVCN N+EAL YL EFY
Sbjct: 250  WGTVCKGEVESLWKVCNNNSEALSYLAEFY 279


>ref|XP_004151464.1| PREDICTED: probable cytokinin riboside 5'-monophosphate
            phosphoribohydrolase LOGL9-like [Cucumis sativus]
            gi|449524603|ref|XP_004169311.1| PREDICTED: probable
            cytokinin riboside 5'-monophosphate phosphoribohydrolase
            LOGL9-like [Cucumis sativus]
          Length = 298

 Score =  372 bits (956), Expect = e-100
 Identities = 183/282 (64%), Positives = 216/282 (76%), Gaps = 6/282 (2%)
 Frame = -2

Query: 1272 MGVSLFNFTGWSAIRLNNSHQKNSMKKMDKQTSK---FKFLKPRGRSGRVFMCK---SEF 1111
            M  S+   +G   I + NSHQK    ++  +  K   FKF K      R  + K   +EF
Sbjct: 1    MSFSMMGSSGCE-ILIRNSHQKTVKLQLFHEKEKQMVFKFSKSGCNPARALLSKHEATEF 59

Query: 1110 EERTSPDEVKKEIQNCYALIRKLGRGVVYLGSSRMGPGHPHYMQTVELAREIGNLLDCTT 931
            EERTSP EV+ EI  CY LI +LG+GVVYLGSSRMGP H HY Q  EL+REI  LLDCTT
Sbjct: 60   EERTSPIEVRTEISKCYELINRLGKGVVYLGSSRMGPDHAHYKQAFELSREISELLDCTT 119

Query: 930  WTGVGPGLMDAATKGALQAKKPVGGFKIGREAGEWTTSQFHPYLPSETYLTCRFFSARKH 751
            W+GVGPGLMDA TKGALQA  PVGGFKIGRE+GEWT+S+FHPYLP+ETY TCRFFSARKH
Sbjct: 120  WSGVGPGLMDAVTKGALQAGNPVGGFKIGRESGEWTSSKFHPYLPTETYFTCRFFSARKH 179

Query: 750  GLVDAAMRCAASDRTAVIALPGGVGTLDEMFEILALIQLERVGSEHPVPFLVMNYDLFYS 571
            GLVDAA+R  +SDRTA + LPGG+GT DE+FEILALIQL R+GS+ PVPFL+MNYD FYS
Sbjct: 180  GLVDAAVRSCSSDRTAFVTLPGGIGTFDEVFEILALIQLRRIGSKLPVPFLLMNYDSFYS 239

Query: 570  KLLAFFDDCEDWGTVSEGEVGSLWKVCNGNTEALEYLREFYS 445
            KLL FF+DCE+WGT+++GEV SLWKVC+ N +A+ YL  FYS
Sbjct: 240  KLLEFFNDCENWGTLAKGEVDSLWKVCDNNADAVAYLSSFYS 281


>ref|XP_002311733.1| predicted protein [Populus trichocarpa] gi|222851553|gb|EEE89100.1|
            predicted protein [Populus trichocarpa]
          Length = 226

 Score =  370 bits (951), Expect = e-100
 Identities = 171/223 (76%), Positives = 193/223 (86%)
 Frame = -2

Query: 1116 EFEERTSPDEVKKEIQNCYALIRKLGRGVVYLGSSRMGPGHPHYMQTVELAREIGNLLDC 937
            +F+ERTSP E++KEI  CY LI +LGRGVVYLGSSRMGP HPHY Q +EL RE+ NLLDC
Sbjct: 1    DFDERTSPTEIRKEIGRCYELIHRLGRGVVYLGSSRMGPDHPHYSQALELGREVANLLDC 60

Query: 936  TTWTGVGPGLMDAATKGALQAKKPVGGFKIGREAGEWTTSQFHPYLPSETYLTCRFFSAR 757
            T+WTG GPGLMDAATKGAL+A KPVGGFKI +EAGEWT S FH YLPSETYLTCRFFSAR
Sbjct: 61   TSWTGAGPGLMDAATKGALEAGKPVGGFKIAKEAGEWTASNFHSYLPSETYLTCRFFSAR 120

Query: 756  KHGLVDAAMRCAASDRTAVIALPGGVGTLDEMFEILALIQLERVGSEHPVPFLVMNYDLF 577
            KHGLVDAA+R + SDRTAV+ALPGG+GTLDEMFEIL LIQL+R+GSE PVPFLVMNYD +
Sbjct: 121  KHGLVDAAVRSSCSDRTAVVALPGGIGTLDEMFEILTLIQLQRIGSELPVPFLVMNYDSY 180

Query: 576  YSKLLAFFDDCEDWGTVSEGEVGSLWKVCNGNTEALEYLREFY 448
            Y KLL F  DCE+WGTVS+GEV SLWK+C  N+EAL YL +FY
Sbjct: 181  YQKLLDFLGDCENWGTVSKGEVASLWKICENNSEALAYLADFY 223


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