BLASTX nr result

ID: Coptis23_contig00010609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010609
         (834 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270026.1| PREDICTED: uncharacterized protein LOC100244...   145   1e-32
ref|XP_003550539.1| PREDICTED: uncharacterized protein LOC100798...   139   8e-31
ref|XP_002314378.1| predicted protein [Populus trichocarpa] gi|2...   137   3e-30
ref|XP_003609688.1| hypothetical protein MTR_4g120050 [Medicago ...   135   9e-30
ref|XP_003528634.1| PREDICTED: uncharacterized protein LOC100802...   135   1e-29

>ref|XP_002270026.1| PREDICTED: uncharacterized protein LOC100244834 [Vitis vinifera]
          Length = 420

 Score =  145 bits (366), Expect = 1e-32
 Identities = 108/258 (41%), Positives = 119/258 (46%), Gaps = 11/258 (4%)
 Frame = -2

Query: 833 LKRSKSSSSGAVAIMRRHPHNPHLF----DGEEYSPRKNGFWSFLHFXXXXXXXR-DKMK 669
           LKRSKS+++         P   H      D  +YSP+K GFWSFL+        + DK  
Sbjct: 141 LKRSKSTTT---------PRRGHFLVESEDANDYSPQKRGFWSFLYLPKSTATRKMDKAV 191

Query: 668 GES---RPSVHPXXXXXXXXXTIAKDKCVXXXXXXXXXXXEYGDENEXXXXXXXXXXS-F 501
           G +   R S               K K             E+ DE+E          S F
Sbjct: 192 GSAVTPRESKLAAAITQTHASLSHKPKDKGLGSSSLAKKEEFVDESESPNSHATASSSSF 251

Query: 500 GRKVARSRSVGCGSRSFSGDLLERISTGFGDCTLRRVESQREAKQASKXXXXXXXXXXXX 321
           GRKV+RSRSVGCGSRSFSGD  ERISTGFGDCTLRRVESQRE K  S             
Sbjct: 252 GRKVSRSRSVGCGSRSFSGDFFERISTGFGDCTLRRVESQREGKPKSS------GAHRGG 305

Query: 320 XXXGEHHHIIKERVKCGGIFGGF--XXXXXXXXXXXXXSEEVNNDNRRGVGIGNHITSLP 147
              G  H  IKERVKCGGIFGGF                     DN  G           
Sbjct: 306 APGGPDHQCIKERVKCGGIFGGFIMTSSSSSSSSSSYWMSSTVEDNVNGKSTAAAAPGPL 365

Query: 146 PHSRSKSWGWAFASPMRA 93
            H RSKSWGWAFASPMRA
Sbjct: 366 SHGRSKSWGWAFASPMRA 383


>ref|XP_003550539.1| PREDICTED: uncharacterized protein LOC100798085 [Glycine max]
          Length = 444

 Score =  139 bits (350), Expect = 8e-31
 Identities = 107/276 (38%), Positives = 126/276 (45%), Gaps = 19/276 (6%)
 Frame = -2

Query: 833 LKRSKSSSSGAVAIMRRHPHNPHLFDGEE---------YSPRK-NGFWSFLHFXXXXXXX 684
           LKRSKS+     A  RR   N  L D ++         +SPRK NGFWSFL+        
Sbjct: 154 LKRSKST-----ATPRR---NRSLVDDDDNDDDLVIGPFSPRKRNGFWSFLYLSSKSSK- 204

Query: 683 RDKMKGESRPSVHPXXXXXXXXXTIA---------KDKCVXXXXXXXXXXXEYGDENEXX 531
             K+  +S    +           +A         K+KC            E  D N   
Sbjct: 205 --KLNSKSFRDNNINNTPRISSINLAPASTSSAKLKEKCCSGSSLKTDIVVEQ-DNNNSN 261

Query: 530 XXXXXXXXSFGRKVARSRSVGCGSRSFSGDLLERISTGFGDCTLRRVESQREAKQASKXX 351
                   SF RKV+RS+SVGCGSRSFSGD  ERISTGFGDCTLRRVESQRE K   K  
Sbjct: 262 SPNTASASSFERKVSRSKSVGCGSRSFSGDFFERISTGFGDCTLRRVESQREGK--PKGT 319

Query: 350 XXXXXXXXXXXXXGEHHHIIKERVKCGGIFGGFXXXXXXXXXXXXXSEEVNNDNRRGVGI 171
                          HHH IKERV+CGG+F GF                 ++ +      
Sbjct: 320 GGGASAAVSRAGEQHHHHCIKERVRCGGLFSGFMMTSSSSSSSSSSYWVSSSADDAAAVN 379

Query: 170 GNHITSLPPHSRSKSWGWAFASPMRAFRSTIKPEDK 63
           G   T    H+R +SWGWAFASPMRAF    KP  K
Sbjct: 380 GKSATVALSHNRGRSWGWAFASPMRAFSG--KPSSK 413


>ref|XP_002314378.1| predicted protein [Populus trichocarpa] gi|222863418|gb|EEF00549.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score =  137 bits (345), Expect = 3e-30
 Identities = 107/285 (37%), Positives = 130/285 (45%), Gaps = 9/285 (3%)
 Frame = -2

Query: 830 KRSKSSSSGAVAIMRRHPHNPHLFDGEEYSPRKNGFWSFLHFXXXXXXXR----DKMKGE 663
           KRSKS+++      R H  +    DGE++SPR+ GFWSFL+             +K+   
Sbjct: 129 KRSKSTTTPR----RSHFLDAATDDGEDFSPRRRGFWSFLYLSSSKPGTSTKKIEKVSSL 184

Query: 662 SRPSVHPXXXXXXXXXTIAKDKCVXXXXXXXXXXXEY--GDENEXXXXXXXXXXSFGRKV 489
           +  +               K+KC+                D++           +F RKV
Sbjct: 185 ASSTRAITTTSTNGSTVRPKEKCLGSSLSRKGDSIVVVEDDDDSPNSQATASASTFERKV 244

Query: 488 ARSRSVGCGSRSFSGDLLERISTGFGDCTLRRVESQREAKQASKXXXXXXXXXXXXXXXG 309
           +RSRSVGCGSRSFSGD  ERISTGFGDCTLRRVESQRE K                    
Sbjct: 245 SRSRSVGCGSRSFSGDFFERISTGFGDCTLRRVESQREGKPKVTSGASH----------- 293

Query: 308 EHHHIIKERVKCGGIFGGF---XXXXXXXXXXXXXSEEVNNDNRRGVGIGNHITSLPPHS 138
                +KERV+CGGIFGGF                S    + N +  G G        H 
Sbjct: 294 -----MKERVRCGGIFGGFNITSSSSSSSSSSYWVSSSAEDMNGKSSGAGP-----LAHG 343

Query: 137 RSKSWGWAFASPMRAFRSTIKPEDKXXXXXXXXXXXXXNLSAIPS 3
           RS+SWGWAFASPMRAF S  KP  K             NLSAIPS
Sbjct: 344 RSRSWGWAFASPMRAFGS--KPSSK--DGKRNIKHTTPNLSAIPS 384


>ref|XP_003609688.1| hypothetical protein MTR_4g120050 [Medicago truncatula]
           gi|355510743|gb|AES91885.1| hypothetical protein
           MTR_4g120050 [Medicago truncatula]
          Length = 445

 Score =  135 bits (341), Expect = 9e-30
 Identities = 105/260 (40%), Positives = 121/260 (46%), Gaps = 10/260 (3%)
 Frame = -2

Query: 833 LKRSKSSSSGAVAIMRRHPHNPHLFDGEEYSPRK-NGFWSFLHFXXXXXXXRDKMKGESR 657
           LKRSKS+     A  RR  ++    D E +SPRK NGFWSFL+               S+
Sbjct: 164 LKRSKST-----ATPRRGSNSMVDADDEYFSPRKRNGFWSFLYH-------------SSK 205

Query: 656 PSVHPXXXXXXXXXTIAKDKCVXXXXXXXXXXXEY-GDENEXXXXXXXXXXSFGRKVARS 480
            S               K+KC                +E E          SF RKV+RS
Sbjct: 206 SSTSSKSFSNTTASAKLKEKCCSGSSLGRKNDIVIVEEEEEDNSPNSNNTGSFERKVSRS 265

Query: 479 RSVGCGSRSFSGDLLERISTGFGDCTLRRVESQREAKQAS--KXXXXXXXXXXXXXXXGE 306
           RSVGCGSRSFSGD  ERISTGFGDCTLRRVESQRE K                       
Sbjct: 266 RSVGCGSRSFSGDFFERISTGFGDCTLRRVESQREGKSKGVVASSNGIASVNRAQDHHHH 325

Query: 305 HHHIIKERV--KCGGIFGGFXXXXXXXXXXXXXSEEVN----NDNRRGVGIGNHITSLPP 144
           HHH +KERV  +CGGIF GF             S  V+    +D   G G    +T +  
Sbjct: 326 HHHCMKERVLRRCGGIFSGFMMTSSSSSNSSTSSYWVSSNSADDAVNGGGKQGSVT-VSQ 384

Query: 143 HSRSKSWGWAFASPMRAFRS 84
           +   KSWGWAFASPMRAF S
Sbjct: 385 NRGGKSWGWAFASPMRAFSS 404


>ref|XP_003528634.1| PREDICTED: uncharacterized protein LOC100802982 [Glycine max]
          Length = 420

 Score =  135 bits (339), Expect = 1e-29
 Identities = 101/271 (37%), Positives = 125/271 (46%), Gaps = 14/271 (5%)
 Frame = -2

Query: 833 LKRSKSSSSGAVAIMRRHPHNPHLFDGEE-------YSPRK-NGFWSFLHFXXXXXXXRD 678
           LKRSKS+++       R  H+  + D ++       +SPRK NGFWSFL+         +
Sbjct: 130 LKRSKSTATP------RRNHSLVVDDDDDDEFAIGGFSPRKRNGFWSFLYLSSKSSKKLN 183

Query: 677 K--MKGESRPSVHPXXXXXXXXXTIA-KDKCVXXXXXXXXXXXEYGDENEXXXXXXXXXX 507
               +  + P +           ++  KDK             E  + N           
Sbjct: 184 SKSFRDHNPPRISTINSAPGSSSSVKLKDKRCSGSSLKTDIVVEQDNTNSPNTASASASS 243

Query: 506 SFGRKVARSRSVGCGSRSFSGDLLERISTGFGDCTLRRVESQREAKQASKXXXXXXXXXX 327
            F RKV+RSRSVGCGSRSFSGD  ERISTGFGDCTLRRVESQRE K   K          
Sbjct: 244 -FERKVSRSRSVGCGSRSFSGDFFERISTGFGDCTLRRVESQREGK--PKGIGGGSSAVS 300

Query: 326 XXXXXGEHHHIIKERVKCGGIFGGF--XXXXXXXXXXXXXSEEVNNDNRRGVGI-GNHIT 156
                  HHH +KERV+CGG+F GF                    +D      + G   T
Sbjct: 301 RGGEHHHHHHCMKERVRCGGLFSGFMMTSSSSSSSSSSYWVSSSADDAAAAAAVNGKSAT 360

Query: 155 SLPPHSRSKSWGWAFASPMRAFRSTIKPEDK 63
               H+R +SWGWAFASPMRAF    KP  K
Sbjct: 361 VALSHNRGRSWGWAFASPMRAFSG--KPSSK 389


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