BLASTX nr result

ID: Coptis23_contig00010602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010602
         (707 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279361.1| PREDICTED: UPF0202 protein At1g10490 [Vitis ...   325   7e-87
ref|XP_002310611.1| predicted protein [Populus trichocarpa] gi|2...   309   3e-82
ref|XP_004164945.1| PREDICTED: LOW QUALITY PROTEIN: UPF0202 prot...   309   4e-82
ref|XP_004141967.1| PREDICTED: UPF0202 protein At1g10490-like [C...   309   4e-82
ref|XP_002307135.1| predicted protein [Populus trichocarpa] gi|2...   308   9e-82

>ref|XP_002279361.1| PREDICTED: UPF0202 protein At1g10490 [Vitis vinifera]
           gi|296082521|emb|CBI21526.3| unnamed protein product
           [Vitis vinifera]
          Length = 1032

 Score =  325 bits (832), Expect = 7e-87
 Identities = 164/235 (69%), Positives = 192/235 (81%)
 Frame = +3

Query: 3   NLKEQLSDDFPVGPLIGKCCTLDQAKAAMKFLGTILDKTLRTTVAMLAARGRGKSSVLGL 182
           NLKEQL++DFPVGPLI KCCTLDQ KA + FL  ILDK LR+TV  LAARGRGKS+ LGL
Sbjct: 236 NLKEQLNEDFPVGPLIKKCCTLDQGKAVITFLDAILDKALRSTVVSLAARGRGKSAALGL 295

Query: 183 SIAGAISAGYSNIFVTAPNPENLKTLFVFVLKGLVALDYKEHTDYEVVKTSNSEFKNVIV 362
           ++AGAI+AGYSNIFVTAP+P+NLKTLF F+ KG  AL+YKEH DY+VVK++N EFK   V
Sbjct: 296 AVAGAIAAGYSNIFVTAPSPDNLKTLFEFICKGFDALEYKEHIDYDVVKSTNPEFKKATV 355

Query: 363 RVDIYRKHRQTIQYIQPFENEQLSQVDLLVVDEAAAIPLPVVKSLFGPYLIFLSSTINGY 542
           R++IYR+HRQTIQYIQP E+E+LSQV+LLVVDEAAAIPLPVVKSL GPYL+FLSST+NGY
Sbjct: 356 RINIYRQHRQTIQYIQPHEHEKLSQVELLVVDEAAAIPLPVVKSLLGPYLVFLSSTVNGY 415

Query: 543 EGTGRXXXXXXXXXXXXXXCMPNQMPTIPVENSLSGRTCEEVVLSESVRYASGDP 707
           EGTGR                 +QMPT  VENSLSGR  +++ LSES+RYASGDP
Sbjct: 416 EGTGRSLSLKLLQQLEE----QSQMPTKSVENSLSGRLFKKIELSESIRYASGDP 466


>ref|XP_002310611.1| predicted protein [Populus trichocarpa] gi|222853514|gb|EEE91061.1|
           predicted protein [Populus trichocarpa]
          Length = 1033

 Score =  309 bits (792), Expect = 3e-82
 Identities = 154/235 (65%), Positives = 190/235 (80%)
 Frame = +3

Query: 3   NLKEQLSDDFPVGPLIGKCCTLDQAKAAMKFLGTILDKTLRTTVAMLAARGRGKSSVLGL 182
           NLKEQL +DFPVGPL+ KCCTLDQ KA + FL +ILDKT R+TVA+LAARGRGKS+ LGL
Sbjct: 235 NLKEQLHEDFPVGPLVKKCCTLDQGKAVITFLDSILDKTPRSTVALLAARGRGKSAALGL 294

Query: 183 SIAGAISAGYSNIFVTAPNPENLKTLFVFVLKGLVALDYKEHTDYEVVKTSNSEFKNVIV 362
           ++AGAI+AGYSNIF+TAP+PENLKTLF F+ KG  AL+YKEH DY+VVK++N EFK   V
Sbjct: 295 AVAGAIAAGYSNIFITAPSPENLKTLFEFICKGFDALEYKEHIDYDVVKSANPEFKKATV 354

Query: 363 RVDIYRKHRQTIQYIQPFENEQLSQVDLLVVDEAAAIPLPVVKSLFGPYLIFLSSTINGY 542
           R++I+++HRQTIQY+QP E+E+LSQV+LLV+DEAAAIPLPVV+SL GPYL+FLSST+NGY
Sbjct: 355 RINIFKQHRQTIQYLQPHEHEKLSQVELLVIDEAAAIPLPVVRSLLGPYLVFLSSTVNGY 414

Query: 543 EGTGRXXXXXXXXXXXXXXCMPNQMPTIPVENSLSGRTCEEVVLSESVRYASGDP 707
           EGTGR                 +Q+ +  VE SLSGR   ++ LSES+RYAS DP
Sbjct: 415 EGTGRSLSLKLLQQLEE----QSQISSKNVEGSLSGRLFRKIELSESIRYASRDP 465


>ref|XP_004164945.1| PREDICTED: LOW QUALITY PROTEIN: UPF0202 protein At1g10490-like
           [Cucumis sativus]
          Length = 1030

 Score =  309 bits (791), Expect = 4e-82
 Identities = 156/235 (66%), Positives = 190/235 (80%)
 Frame = +3

Query: 3   NLKEQLSDDFPVGPLIGKCCTLDQAKAAMKFLGTILDKTLRTTVAMLAARGRGKSSVLGL 182
           NLKEQLSD+FPVGPLI KCCTLDQ +A + FL  ILDKTLR TVA+LA RGRGKS+ LGL
Sbjct: 236 NLKEQLSDEFPVGPLIKKCCTLDQGRAVVTFLDAILDKTLRCTVALLAGRGRGKSAALGL 295

Query: 183 SIAGAISAGYSNIFVTAPNPENLKTLFVFVLKGLVALDYKEHTDYEVVKTSNSEFKNVIV 362
           ++AGA++AGYSNIFVTAP+PENLKTLF FV KGL A++YKEH D++VV+++N EFK   V
Sbjct: 296 AVAGAVAAGYSNIFVTAPSPENLKTLFDFVCKGLNAVEYKEHIDFDVVRSTNPEFKKATV 355

Query: 363 RVDIYRKHRQTIQYIQPFENEQLSQVDLLVVDEAAAIPLPVVKSLFGPYLIFLSSTINGY 542
           R++IY++HRQTIQYIQP ++E+LSQV+LLVVDEAAAIPLPVVKSL GPYL+FLSST+NGY
Sbjct: 356 RINIYKQHRQTIQYIQPQQHEKLSQVELLVVDEAAAIPLPVVKSLLGPYLVFLSSTVNGY 415

Query: 543 EGTGRXXXXXXXXXXXXXXCMPNQMPTIPVENSLSGRTCEEVVLSESVRYASGDP 707
           EGTGR                 +Q+    VE S+SG   +++ LSES+RYASGDP
Sbjct: 416 EGTGRSLSLKLLQQLEE----QSQVSKKSVEGSVSGCLFKKIELSESIRYASGDP 466


>ref|XP_004141967.1| PREDICTED: UPF0202 protein At1g10490-like [Cucumis sativus]
          Length = 1030

 Score =  309 bits (791), Expect = 4e-82
 Identities = 156/235 (66%), Positives = 190/235 (80%)
 Frame = +3

Query: 3   NLKEQLSDDFPVGPLIGKCCTLDQAKAAMKFLGTILDKTLRTTVAMLAARGRGKSSVLGL 182
           NLKEQLSD+FPVGPLI KCCTLDQ +A + FL  ILDKTLR TVA+LA RGRGKS+ LGL
Sbjct: 236 NLKEQLSDEFPVGPLIKKCCTLDQGRAVVTFLDAILDKTLRCTVALLAGRGRGKSAALGL 295

Query: 183 SIAGAISAGYSNIFVTAPNPENLKTLFVFVLKGLVALDYKEHTDYEVVKTSNSEFKNVIV 362
           ++AGA++AGYSNIFVTAP+PENLKTLF FV KGL A++YKEH D++VV+++N EFK   V
Sbjct: 296 AVAGAVAAGYSNIFVTAPSPENLKTLFDFVCKGLNAVEYKEHIDFDVVRSTNPEFKKATV 355

Query: 363 RVDIYRKHRQTIQYIQPFENEQLSQVDLLVVDEAAAIPLPVVKSLFGPYLIFLSSTINGY 542
           R++IY++HRQTIQYIQP ++E+LSQV+LLVVDEAAAIPLPVVKSL GPYL+FLSST+NGY
Sbjct: 356 RINIYKQHRQTIQYIQPQQHEKLSQVELLVVDEAAAIPLPVVKSLLGPYLVFLSSTVNGY 415

Query: 543 EGTGRXXXXXXXXXXXXXXCMPNQMPTIPVENSLSGRTCEEVVLSESVRYASGDP 707
           EGTGR                 +Q+    VE S+SG   +++ LSES+RYASGDP
Sbjct: 416 EGTGRSLSLKLLQQLEE----QSQVSKKSVEGSVSGCLFKKIELSESIRYASGDP 466


>ref|XP_002307135.1| predicted protein [Populus trichocarpa] gi|222856584|gb|EEE94131.1|
           predicted protein [Populus trichocarpa]
          Length = 962

 Score =  308 bits (788), Expect = 9e-82
 Identities = 153/235 (65%), Positives = 189/235 (80%)
 Frame = +3

Query: 3   NLKEQLSDDFPVGPLIGKCCTLDQAKAAMKFLGTILDKTLRTTVAMLAARGRGKSSVLGL 182
           NLKEQL  DFPVGPLI KCCTLDQ KA + FL ++LDKTLR+TVA+LAARGRGKS+ LGL
Sbjct: 241 NLKEQLHQDFPVGPLIKKCCTLDQGKAVITFLDSVLDKTLRSTVALLAARGRGKSAALGL 300

Query: 183 SIAGAISAGYSNIFVTAPNPENLKTLFVFVLKGLVALDYKEHTDYEVVKTSNSEFKNVIV 362
           ++AGAI+AGYSNIF+TAP+PEN+KTLF F+ KG  A++Y EH DY+VVK++N EFK   V
Sbjct: 301 AVAGAIAAGYSNIFITAPSPENVKTLFEFICKGFDAIEYTEHIDYDVVKSANPEFKKATV 360

Query: 363 RVDIYRKHRQTIQYIQPFENEQLSQVDLLVVDEAAAIPLPVVKSLFGPYLIFLSSTINGY 542
           R++I+++HRQTIQYIQP E+E+LSQV+LLV+DEAAAIPLPVV+SL GPYL+FLSST+NGY
Sbjct: 361 RINIFKQHRQTIQYIQPHEHEKLSQVELLVIDEAAAIPLPVVRSLLGPYLVFLSSTVNGY 420

Query: 543 EGTGRXXXXXXXXXXXXXXCMPNQMPTIPVENSLSGRTCEEVVLSESVRYASGDP 707
           EGTGR                 +Q+ +  VE SLSGR   ++ LSES+RYAS DP
Sbjct: 421 EGTGRSLSLKLLQQLEE----QSQISSKNVEGSLSGRLFRKIELSESIRYASRDP 471


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