BLASTX nr result

ID: Coptis23_contig00010580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010580
         (1000 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001068122.1| Os11g0571900 [Oryza sativa Japonica Group] g...   147   4e-33
gb|EEC68390.1| hypothetical protein OsI_36542 [Oryza sativa Indi...   147   4e-33
tpg|DAA42159.1| TPA: hypothetical protein ZEAMMB73_567014 [Zea m...   146   9e-33
tpg|DAA42158.1| TPA: lymphoid organ expressed yellow head virus ...   146   9e-33
ref|NP_001149997.1| LOC100283624 [Zea mays] gi|195635941|gb|ACG3...   145   1e-32

>ref|NP_001068122.1| Os11g0571900 [Oryza sativa Japonica Group]
           gi|77551547|gb|ABA94344.1| Targeting protein for Xklp2
           containing protein, expressed [Oryza sativa Japonica
           Group] gi|113645344|dbj|BAF28485.1| Os11g0571900 [Oryza
           sativa Japonica Group] gi|215707262|dbj|BAG93722.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|222637122|gb|EEE67254.1| hypothetical protein
           OsJ_24413 [Oryza sativa Japonica Group]
          Length = 430

 Score =  147 bits (371), Expect = 4e-33
 Identities = 89/182 (48%), Positives = 111/182 (60%), Gaps = 9/182 (4%)
 Frame = +3

Query: 84  FAFRLDERAEKRKEFYSKIEEKIHAKEVEKNNLQAKSKESQEADLKQLRKNLTFKAAPMP 263
           F+FRL ERAEKRKEFY K+EEKIHAKE+E+ NLQAKSKESQEA++K LRK+LTFKA PMP
Sbjct: 208 FSFRLQERAEKRKEFYQKLEEKIHAKELEQTNLQAKSKESQEAEIKLLRKSLTFKATPMP 267

Query: 264 TFYXXXXXXXXXXXXXXSTRPISPKLGRHKISNAVAESSTEGIVSCKSPVSSSN-GNPSK 440
           +FY               TR  SPKLGRHK +N+ A +S +G VSC+SP S +N    ++
Sbjct: 268 SFY-KEQPPKVELKKIPPTRARSPKLGRHKPTNSAAAASVDGSVSCESPRSITNLAKLTE 326

Query: 441 STGKGSLANSNGDXXXXXXXXXXXXXXLPSQKSATTKTEAK--------QNSKPKSKDTE 596
           ST       +N                +PSQ SAT KTE K         N+KPK+   +
Sbjct: 327 ST------ENNKPHATARKPAQRSVTKIPSQASATAKTETKPLVTKQKTSNTKPKAPRAK 380

Query: 597 LE 602
           +E
Sbjct: 381 VE 382


>gb|EEC68390.1| hypothetical protein OsI_36542 [Oryza sativa Indica Group]
          Length = 430

 Score =  147 bits (371), Expect = 4e-33
 Identities = 89/182 (48%), Positives = 111/182 (60%), Gaps = 9/182 (4%)
 Frame = +3

Query: 84  FAFRLDERAEKRKEFYSKIEEKIHAKEVEKNNLQAKSKESQEADLKQLRKNLTFKAAPMP 263
           F+FRL ERAEKRKEFY K+EEKIHAKE+E+ NLQAKSKESQEA++K LRK+LTFKA PMP
Sbjct: 208 FSFRLQERAEKRKEFYQKLEEKIHAKELEQTNLQAKSKESQEAEIKLLRKSLTFKATPMP 267

Query: 264 TFYXXXXXXXXXXXXXXSTRPISPKLGRHKISNAVAESSTEGIVSCKSPVSSSN-GNPSK 440
           +FY               TR  SPKLGRHK +N+ A +S +G VSC+SP S +N    ++
Sbjct: 268 SFY-KEQPPKVELKKIPPTRARSPKLGRHKPTNSAAAASVDGSVSCESPRSITNLAKLTE 326

Query: 441 STGKGSLANSNGDXXXXXXXXXXXXXXLPSQKSATTKTEAK--------QNSKPKSKDTE 596
           ST       +N                +PSQ SAT KTE K         N+KPK+   +
Sbjct: 327 ST------ENNKPHATARKPAQRSVTKIPSQASATAKTETKPLVTKQKTSNTKPKAPRAK 380

Query: 597 LE 602
           +E
Sbjct: 381 VE 382


>tpg|DAA42159.1| TPA: hypothetical protein ZEAMMB73_567014 [Zea mays]
          Length = 256

 Score =  146 bits (368), Expect = 9e-33
 Identities = 86/175 (49%), Positives = 106/175 (60%), Gaps = 8/175 (4%)
 Frame = +3

Query: 84  FAFRLDERAEKRKEFYSKIEEKIHAKEVEKNNLQAKSKESQEADLKQLRKNLTFKAAPMP 263
           F+FRL+ERAEKRKEF+ K+EEKIHAKE+EK NLQ KSKESQEA++K LRK+LTFKA PMP
Sbjct: 34  FSFRLEERAEKRKEFFQKLEEKIHAKELEKTNLQEKSKESQEAEIKLLRKSLTFKATPMP 93

Query: 264 TFYXXXXXXXXXXXXXXSTRPISPKLGRHKISNAVAESSTEGIVSCKSPVSSSNGNPSKS 443
           +FY               TR  SPKLGRHK +N+   +S +G VSC+SP S++N     S
Sbjct: 94  SFY-KEQPPKVELKKIPPTRARSPKLGRHKPANSATAASADGSVSCESPRSTAN-----S 147

Query: 444 TGKGSLANSNGDXXXXXXXXXXXXXXLPSQKSATTKTEAK--------QNSKPKS 584
           +       +N                 PSQ SATTK EA+         NSKPK+
Sbjct: 148 SKVNEAMENNKPHAPARKPVQRPVVKAPSQASATTKAEARPVVTRPKISNSKPKA 202


>tpg|DAA42158.1| TPA: lymphoid organ expressed yellow head virus receptor protein
           [Zea mays]
          Length = 454

 Score =  146 bits (368), Expect = 9e-33
 Identities = 86/175 (49%), Positives = 106/175 (60%), Gaps = 8/175 (4%)
 Frame = +3

Query: 84  FAFRLDERAEKRKEFYSKIEEKIHAKEVEKNNLQAKSKESQEADLKQLRKNLTFKAAPMP 263
           F+FRL+ERAEKRKEF+ K+EEKIHAKE+EK NLQ KSKESQEA++K LRK+LTFKA PMP
Sbjct: 232 FSFRLEERAEKRKEFFQKLEEKIHAKELEKTNLQEKSKESQEAEIKLLRKSLTFKATPMP 291

Query: 264 TFYXXXXXXXXXXXXXXSTRPISPKLGRHKISNAVAESSTEGIVSCKSPVSSSNGNPSKS 443
           +FY               TR  SPKLGRHK +N+   +S +G VSC+SP S++N     S
Sbjct: 292 SFY-KEQPPKVELKKIPPTRARSPKLGRHKPANSATAASADGSVSCESPRSTAN-----S 345

Query: 444 TGKGSLANSNGDXXXXXXXXXXXXXXLPSQKSATTKTEAK--------QNSKPKS 584
           +       +N                 PSQ SATTK EA+         NSKPK+
Sbjct: 346 SKVNEAMENNKPHAPARKPVQRPVVKAPSQASATTKAEARPVVTRPKISNSKPKA 400


>ref|NP_001149997.1| LOC100283624 [Zea mays] gi|195635941|gb|ACG37439.1| lymphoid organ
           expressed yellow head virus receptor protein [Zea mays]
          Length = 455

 Score =  145 bits (367), Expect = 1e-32
 Identities = 88/176 (50%), Positives = 109/176 (61%), Gaps = 9/176 (5%)
 Frame = +3

Query: 84  FAFRLDERAEKRKEFYSKIEEKIHAKEVEKNNLQAKSKESQEADLKQLRKNLTFKAAPMP 263
           F+FRL+ERAEKRKEF+ K+EEKIHAKE+EK NLQ KSKESQEA++K LRK+LTFKA PMP
Sbjct: 233 FSFRLEERAEKRKEFFQKLEEKIHAKELEKTNLQEKSKESQEAEIKLLRKSLTFKATPMP 292

Query: 264 TFYXXXXXXXXXXXXXXSTRPISPKLGRHKISNAVAESSTEGIVSCKSPVSSSNGNPSKS 443
           +FY               TR  SPKLGRHK +N+   +S +G VSC+SP S++N      
Sbjct: 293 SFY-KEQPPKVELKKIPPTRARSPKLGRHKPANSATAASADGSVSCESPRSTAN------ 345

Query: 444 TGKGSLA-NSNGDXXXXXXXXXXXXXXLPSQKSATTKTEAK--------QNSKPKS 584
           +GK + A  +N                 PSQ SATTK EA+         NSKPK+
Sbjct: 346 SGKVNEAMENNKPHAPARKPVQRPVMKAPSQASATTKAEARPVVTRPKISNSKPKA 401


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