BLASTX nr result

ID: Coptis23_contig00010579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010579
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282069.1| PREDICTED: uncharacterized protein LOC100247...   150   1e-34
emb|CAN83005.1| hypothetical protein VITISV_003699 [Vitis vinifera]   150   1e-34
ref|XP_002315586.1| predicted protein [Populus trichocarpa] gi|2...   148   4e-34
ref|XP_002312600.1| predicted protein [Populus trichocarpa] gi|2...   148   4e-34
ref|XP_003555501.1| PREDICTED: uncharacterized protein LOC100814...   139   2e-31

>ref|XP_002282069.1| PREDICTED: uncharacterized protein LOC100247804 [Vitis vinifera]
           gi|296083723|emb|CBI23712.3| unnamed protein product
           [Vitis vinifera]
          Length = 642

 Score =  150 bits (378), Expect = 1e-34
 Identities = 74/132 (56%), Positives = 92/132 (69%), Gaps = 1/132 (0%)
 Frame = +2

Query: 2   ESRLRGMDDCSTSMNVIIPAGAHGGPRTRNGGPSSLTERWRSGGHCDCGGWDIGCPLTVL 181
           E  LR   DCSTSM++++PAG HGGPRTRNGGPSSL ERWRSGGHCDCGGWDIGCPLTVL
Sbjct: 504 ECCLRSTGDCSTSMDILVPAGIHGGPRTRNGGPSSLIERWRSGGHCDCGGWDIGCPLTVL 563

Query: 182 TSRSSKEIWT-NTNAEGEHNSLDLIIEGSRQGVPPSLEMVNVGNGTYNIXXXXXXXXXXX 358
            +R++KE ++ +T+ + E+ S DL  +GS     P L +VNV +G Y I           
Sbjct: 564 KTRATKEEFSHHTDIQEEYKSFDLFAQGSELSA-PILRVVNVHDGLYFIHFRSMLSALQS 622

Query: 359 XXVGVAIIHTQS 394
             + VAIIHT+S
Sbjct: 623 FSIAVAIIHTRS 634


>emb|CAN83005.1| hypothetical protein VITISV_003699 [Vitis vinifera]
          Length = 597

 Score =  150 bits (378), Expect = 1e-34
 Identities = 74/132 (56%), Positives = 92/132 (69%), Gaps = 1/132 (0%)
 Frame = +2

Query: 2   ESRLRGMDDCSTSMNVIIPAGAHGGPRTRNGGPSSLTERWRSGGHCDCGGWDIGCPLTVL 181
           E  LR   DCSTSM++++PAG HGGPRTRNGGPSSL ERWRSGGHCDCGGWDIGCPLTVL
Sbjct: 459 ECCLRSTGDCSTSMDILVPAGIHGGPRTRNGGPSSLIERWRSGGHCDCGGWDIGCPLTVL 518

Query: 182 TSRSSKEIWT-NTNAEGEHNSLDLIIEGSRQGVPPSLEMVNVGNGTYNIXXXXXXXXXXX 358
            +R++KE ++ +T+ + E+ S DL  +GS     P L +VNV +G Y I           
Sbjct: 519 KTRATKEEFSHHTDIQEEYKSFDLFAQGSELSA-PILRVVNVHDGLYFIHFRSMLSALQS 577

Query: 359 XXVGVAIIHTQS 394
             + VAIIHT+S
Sbjct: 578 FSIAVAIIHTRS 589


>ref|XP_002315586.1| predicted protein [Populus trichocarpa] gi|222864626|gb|EEF01757.1|
           predicted protein [Populus trichocarpa]
          Length = 615

 Score =  148 bits (374), Expect = 4e-34
 Identities = 70/131 (53%), Positives = 91/131 (69%), Gaps = 1/131 (0%)
 Frame = +2

Query: 14  RGMDDCSTSMNVIIPAGAHGGPRTRNGGPSSLTERWRSGGHCDCGGWDIGCPLTVLTSRS 193
           R   DCSTS++++IPAG HGGPRTRNGGPSSL +RWRSGG+CDCGGWD+GCPLTVL SRS
Sbjct: 478 RDTGDCSTSIDILIPAGLHGGPRTRNGGPSSLIDRWRSGGYCDCGGWDLGCPLTVLKSRS 537

Query: 194 -SKEIWTNTNAEGEHNSLDLIIEGSRQGVPPSLEMVNVGNGTYNIXXXXXXXXXXXXXVG 370
            +KE  ++ + +GE   ++L I+GS  G PP L MVNV +G Y++             + 
Sbjct: 538 ANKEFSSSADMQGECKLINLFIQGSENGAPP-LRMVNVHDGMYSVHFQSTLSALQTFSIA 596

Query: 371 VAIIHTQSHSH 403
           +A IH+Q   H
Sbjct: 597 LAFIHSQKVPH 607


>ref|XP_002312600.1| predicted protein [Populus trichocarpa] gi|222852420|gb|EEE89967.1|
           predicted protein [Populus trichocarpa]
          Length = 607

 Score =  148 bits (374), Expect = 4e-34
 Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 1/123 (0%)
 Frame = +2

Query: 26  DCSTSMNVIIPAGAHGGPRTRNGGPSSLTERWRSGGHCDCGGWDIGCPLTVLTSRSS-KE 202
           DCSTS++++IPAG HGGPRTRNGGPSSL +RW SGGHCDCGGWD+GCPLTVL SRS+ KE
Sbjct: 474 DCSTSIDILIPAGLHGGPRTRNGGPSSLIDRWISGGHCDCGGWDLGCPLTVLKSRSAHKE 533

Query: 203 IWTNTNAEGEHNSLDLIIEGSRQGVPPSLEMVNVGNGTYNIXXXXXXXXXXXXXVGVAII 382
             +  + +GE   +DL IEGS  G PP + MVNV +G Y +             + VA I
Sbjct: 534 FSSQADTQGECKLVDLFIEGSENGAPP-MSMVNVHDGLYFVHFQSTLSALQSFSIAVAFI 592

Query: 383 HTQ 391
           HTQ
Sbjct: 593 HTQ 595


>ref|XP_003555501.1| PREDICTED: uncharacterized protein LOC100814338 [Glycine max]
          Length = 624

 Score =  139 bits (350), Expect = 2e-31
 Identities = 70/132 (53%), Positives = 88/132 (66%), Gaps = 1/132 (0%)
 Frame = +2

Query: 2   ESRLRGMDDCSTSMNVIIPAGAHGGPRTRNGGPSSLTERWRSGGHCDCGGWDIGCPLTVL 181
           ES  +   +CSTS +++IPAG HGGPRTRNGGPSSL +RWRSGGHCDCGGWD GCPLTVL
Sbjct: 482 ESCNQNNGNCSTSTSILIPAGLHGGPRTRNGGPSSLIDRWRSGGHCDCGGWDEGCPLTVL 541

Query: 182 TSRSSK-EIWTNTNAEGEHNSLDLIIEGSRQGVPPSLEMVNVGNGTYNIXXXXXXXXXXX 358
             RS+K ++ +  + + E  S+DL+ +GS     P+L MVNV +G Y I           
Sbjct: 542 ERRSNKADVMSKIDTQDECKSVDLVTQGS-SDYSPTLRMVNVHDGLYYIHFHPPLSALQS 600

Query: 359 XXVGVAIIHTQS 394
             + VAIIH QS
Sbjct: 601 FSIVVAIIHAQS 612


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