BLASTX nr result

ID: Coptis23_contig00010575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010575
         (737 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329971.1| predicted protein [Populus trichocarpa] gi|2...    66   7e-09
ref|XP_002525243.1| conserved hypothetical protein [Ricinus comm...    59   8e-07

>ref|XP_002329971.1| predicted protein [Populus trichocarpa] gi|222871993|gb|EEF09124.1|
           predicted protein [Populus trichocarpa]
          Length = 395

 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 62/186 (33%), Positives = 96/186 (51%), Gaps = 10/186 (5%)
 Frame = +3

Query: 102 MGSITSKLMTRSGSFQEELSRSLQRRHNDFPGLEELLISNSKNDDDQFLVACNENNAKQP 281
           MG I+SKL++RS SFQEEL++++QR  ND P LEEL IS + N D  F + C  N     
Sbjct: 1   MGCISSKLVSRSLSFQEELTKNMQRSANDIPALEELAISGNIN-DQFFALVCTANTVACT 59

Query: 282 NEMPSESIMDFKTSENNSKPFDEEFLNSETTINTWDLMSDLYEEEKKEDAKREHEHRELL 461
            +  S     F    NN  P  E  ++   T + ++  S L +E +++  + E    +L+
Sbjct: 60  YKSGS-----FSGKSNN--PVVEPDISLTKTKSEFN--SSLEQEGEEKHTRLE---AKLV 107

Query: 462 RAVNGSTDIAKRSKS---FNLSSADHES-----SIGETSASIS--IRSKSFHTLDKYNAL 611
                S D  KRSKS   F  + A + S      + E   +     R+ SFHT+++++AL
Sbjct: 108 LPQVPSIDPTKRSKSCHFFPTNEASYPSVEIFHGVEEKRRNHEGMERATSFHTIEEFDAL 167

Query: 612 IMERKV 629
           I + K+
Sbjct: 168 IEKLKL 173


>ref|XP_002525243.1| conserved hypothetical protein [Ricinus communis]
           gi|223535540|gb|EEF37209.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 337

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 54/173 (31%), Positives = 82/173 (47%)
 Frame = +3

Query: 102 MGSITSKLMTRSGSFQEELSRSLQRRHNDFPGLEELLISNSKNDDDQFLVACNENNAKQP 281
           MG I+SKLM RS S +EEL++S+QR  +  P LEE +   S+N +DQFL   +  N    
Sbjct: 1   MGCISSKLMPRSTSLKEELNQSMQRSASGSPALEESV--PSQNINDQFLALVSSANT-VA 57

Query: 282 NEMPSESIMDFKTSENNSKPFDEEFLNSETTINTWDLMSDLYEEEKKEDAKREHEHRELL 461
             + S S  D    +N     D    N+  T NT           +K+  +R    R  L
Sbjct: 58  RRLRSRSFSD----KNTQSVIDH---NTALTSNT-----------RKQGGERARS-RSWL 98

Query: 462 RAVNGSTDIAKRSKSFNLSSADHESSIGETSASISIRSKSFHTLDKYNALIME 620
             +   T I   S       +DH+  +G        R++SFHT+++Y+A+I +
Sbjct: 99  SEIELPTPIPDTSNGTKEEESDHK-GVG--------RARSFHTVEEYDAMIRQ 142


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