BLASTX nr result
ID: Coptis23_contig00010563
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00010563
(957 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002510601.1| tetracycline transporter, putative [Ricinus ... 402 e-110
ref|XP_002280708.1| PREDICTED: hippocampus abundant transcript 1... 386 e-105
ref|XP_002284761.1| PREDICTED: hippocampus abundant transcript 1... 380 e-103
ref|XP_002306959.1| predicted protein [Populus trichocarpa] gi|2... 379 e-103
emb|CAN64703.1| hypothetical protein VITISV_038996 [Vitis vinifera] 377 e-102
>ref|XP_002510601.1| tetracycline transporter, putative [Ricinus communis]
gi|223551302|gb|EEF52788.1| tetracycline transporter,
putative [Ricinus communis]
Length = 442
Score = 402 bits (1033), Expect = e-110
Identities = 210/319 (65%), Positives = 259/319 (81%)
Frame = -1
Query: 957 HLFVTVFLYSFSTFMVIPSITDVTMSALCPGQNECSLAIYLSGFQQAVTGVGSLVMMPVV 778
HLF+T+FL++FSTFMVIP+ITDVTMSALCPG++ECSLAIYL+GFQQA+ G+G+LVMMP+V
Sbjct: 9 HLFMTIFLHNFSTFMVIPAITDVTMSALCPGRDECSLAIYLTGFQQAIIGLGTLVMMPLV 68
Query: 777 GNLSDVYGRKALLTIPMALTVVPLAILAXXXXXXXXXXXYLIKLLTAMFCEGSVQCLSLA 598
GNLSD YGRKALLTIPM+LTV+PLA LA Y++K LTAM CEGSV CL+LA
Sbjct: 69 GNLSDKYGRKALLTIPMSLTVIPLATLAYSRTTYFFYAYYVMKTLTAMVCEGSVHCLALA 128
Query: 597 YVADNIEEGRRAAAFGMLAGVGSSAFVCGTLSARFLSTSSTFQVSAFVAVLATVYMKTFL 418
YVADN+ E RRA+AFG+L+G+GSSAFVCGTLS RFLST+STFQVSA +AV+A VYMK FL
Sbjct: 129 YVADNVPEARRASAFGILSGIGSSAFVCGTLSTRFLSTASTFQVSASMAVVAIVYMKVFL 188
Query: 417 VDSGYQKIIDATSPLLSNTKDHAKLSSADGNSCPKMRTGKKIPSVTDMVQLLCSSVTFTQ 238
DS K + T+P++SN K K+ NS + + +PS+ DM+ LL SSVTFTQ
Sbjct: 189 QDSIVDK--NLTTPIISNGK--GKVYVQIENSSENEQVFRTMPSLEDMICLLKSSVTFTQ 244
Query: 237 AAVVAFFSSLAESGLHASLLFYLKAQFQFNKNQFADLMLIAGLAGAISQLLLMPMLAPCL 58
AA+VAFF +L+E GLHASL++YLKA+F FNKNQFADLM+I+G+AG ISQLLLMP+LAP L
Sbjct: 245 AAIVAFFINLSEVGLHASLMYYLKARFHFNKNQFADLMVISGIAGTISQLLLMPLLAPAL 304
Query: 57 DEVKLLRIGLFAGCANIFL 1
E +LL +GLF C ++FL
Sbjct: 305 GEARLLSVGLFFTCIHMFL 323
>ref|XP_002280708.1| PREDICTED: hippocampus abundant transcript 1 protein [Vitis
vinifera] gi|297744560|emb|CBI37822.3| unnamed protein
product [Vitis vinifera]
Length = 439
Score = 386 bits (992), Expect = e-105
Identities = 203/319 (63%), Positives = 251/319 (78%)
Frame = -1
Query: 957 HLFVTVFLYSFSTFMVIPSITDVTMSALCPGQNECSLAIYLSGFQQAVTGVGSLVMMPVV 778
HLFVTV L SFS F+VIP+ITDVTMSALCPG++ECSLAIYLSGFQQA+ G+G++VM PV+
Sbjct: 9 HLFVTVLLGSFSAFIVIPAITDVTMSALCPGKDECSLAIYLSGFQQAIIGLGTVVMTPVI 68
Query: 777 GNLSDVYGRKALLTIPMALTVVPLAILAXXXXXXXXXXXYLIKLLTAMFCEGSVQCLSLA 598
GNLSD YGRKALLTIPMAL+++PLAILA ++I+ LTAM EGS+ CL+LA
Sbjct: 69 GNLSDEYGRKALLTIPMALSIIPLAILAYSRTTTSFYAYFVIRTLTAMVGEGSINCLALA 128
Query: 597 YVADNIEEGRRAAAFGMLAGVGSSAFVCGTLSARFLSTSSTFQVSAFVAVLATVYMKTFL 418
YVADNI EG+RA+AFG+L+GV S+AFVCGTL+ARFLST+STFQV+ V+++ATVYM+ FL
Sbjct: 129 YVADNISEGQRASAFGVLSGVASAAFVCGTLAARFLSTASTFQVATLVSMIATVYMRVFL 188
Query: 417 VDSGYQKIIDATSPLLSNTKDHAKLSSADGNSCPKMRTGKKIPSVTDMVQLLCSSVTFTQ 238
++ + D++ LL K +S DGNS K++T KKIPSV D++ LL F+Q
Sbjct: 189 KETFPKG--DSSQALL---KKEPGMSPDDGNSSEKIQTFKKIPSVGDLISLLKCRAAFSQ 243
Query: 237 AAVVAFFSSLAESGLHASLLFYLKAQFQFNKNQFADLMLIAGLAGAISQLLLMPMLAPCL 58
AAVV FF+ LAE GL ASLL++LKA+F FNKNQFAD+MLI G+ G ISQLL MP+LAP +
Sbjct: 244 AAVVVFFNGLAEGGLQASLLYFLKARFHFNKNQFADIMLIVGVMGTISQLLFMPLLAPRV 303
Query: 57 DEVKLLRIGLFAGCANIFL 1
E KLL IGLF GC NIFL
Sbjct: 304 SEEKLLSIGLFMGCTNIFL 322
>ref|XP_002284761.1| PREDICTED: hippocampus abundant transcript 1 protein [Vitis
vinifera] gi|302141709|emb|CBI18912.3| unnamed protein
product [Vitis vinifera]
Length = 442
Score = 380 bits (975), Expect = e-103
Identities = 197/320 (61%), Positives = 251/320 (78%), Gaps = 1/320 (0%)
Frame = -1
Query: 957 HLFVTVFLYSFSTFMVIPSITDVTMSALCPGQNECSLAIYLSGFQQAVTGVGSLVMMPVV 778
HLF+TVFL++F+TFMVIP+ITDVTM+ALCPG++ECS+AIYL+GFQQ + G+G+LVMMP+V
Sbjct: 9 HLFMTVFLFNFATFMVIPAITDVTMAALCPGRDECSIAIYLTGFQQVIIGLGTLVMMPLV 68
Query: 777 GNLSDVYGRKALLTIPMALTVVPLAILAXXXXXXXXXXXYLIKLLTAMFCEGSVQCLSLA 598
GNLSD+YGRKALLTIPM LT++PLAILA +++K LT+M CEGSV CL+LA
Sbjct: 69 GNLSDMYGRKALLTIPMCLTIIPLAILAWSRSRNFFYAYFVLKTLTSMVCEGSVHCLTLA 128
Query: 597 YVADNIEEGRRAAAFGMLAGVGSSAFVCGTLSARFLSTSSTFQVSAFVAVLATVYMKTFL 418
YVADNI E RRA+AFG+L+GVGSSAFVCGTLSARFL TSSTFQV+A VA +A VYMK FL
Sbjct: 129 YVADNIPEIRRASAFGVLSGVGSSAFVCGTLSARFLKTSSTFQVAASVAAVAAVYMKLFL 188
Query: 417 VDSGYQK-IIDATSPLLSNTKDHAKLSSADGNSCPKMRTGKKIPSVTDMVQLLCSSVTFT 241
DS + ++D + + + DG S K +PS+ DM+ LL +S TFT
Sbjct: 189 PDSVIKDGVLDR-----AILEQKPCVIHLDGESAQDSPVFKSMPSLDDMLSLLQTSSTFT 243
Query: 240 QAAVVAFFSSLAESGLHASLLFYLKAQFQFNKNQFADLMLIAGLAGAISQLLLMPMLAPC 61
+AA+VAFFS+L + GLH SL++YLKA+F FNK+QFADLM+I+G+AG ISQL+LMP+LAP
Sbjct: 244 KAAIVAFFSNLGDVGLHTSLMYYLKARFHFNKHQFADLMMISGIAGTISQLVLMPILAPT 303
Query: 60 LDEVKLLRIGLFAGCANIFL 1
+ E KLL IGL C+++FL
Sbjct: 304 IGEEKLLAIGLLFSCSHMFL 323
>ref|XP_002306959.1| predicted protein [Populus trichocarpa] gi|222856408|gb|EEE93955.1|
predicted protein [Populus trichocarpa]
Length = 447
Score = 379 bits (973), Expect = e-103
Identities = 202/324 (62%), Positives = 251/324 (77%), Gaps = 5/324 (1%)
Frame = -1
Query: 957 HLFVTVFLYSFSTFMVIPSITDVTMSALCPGQNECSLAIYLSGFQQAVTGVGSLVMMPVV 778
HLF+T+FL++FS MVIP+ITDVTMSALCPG++ECSLAIYL+GFQQA+ G+G+LVMMP++
Sbjct: 9 HLFITIFLHNFSAVMVIPAITDVTMSALCPGRDECSLAIYLTGFQQAIIGLGTLVMMPLI 68
Query: 777 GNLSDVYGRKALLTIPMALTVVPLAILAXXXXXXXXXXXYLIKLLTAMFCEGSVQCLSLA 598
GN+SD YGRKALLT+P++L +VP AILA Y++K L AM CEGSV CL+LA
Sbjct: 69 GNMSDKYGRKALLTVPLSLVIVPSAILAYSRTRNFFYAYYVVKTLIAMVCEGSVPCLALA 128
Query: 597 YVADNIEEGRRAAAFGMLAGVGSSAFVCGTLSARFLSTSSTFQVSAFVAVLATVYMKTFL 418
YVADN+ EGRRA+AFG+L+G+ SSAFVCG LS RFLST+STFQVSA VA+ + VYM+ FL
Sbjct: 129 YVADNVPEGRRASAFGILSGIASSAFVCGNLSTRFLSTASTFQVSASVAIASLVYMRFFL 188
Query: 417 VDSGYQKIID--ATSPLL-SNTKDHAKLSSADGNSCP--KMRTGKKIPSVTDMVQLLCSS 253
DS IID T+P+L SN K K N P ++ K PS+ DM+ LL SS
Sbjct: 189 QDS----IIDEQLTAPILTSNGKPKGKGKDYATNEIPSKNVQIFKSAPSLEDMLCLLKSS 244
Query: 252 VTFTQAAVVAFFSSLAESGLHASLLFYLKAQFQFNKNQFADLMLIAGLAGAISQLLLMPM 73
VT +QAAVVAFF SLAE GLHASLL+YLKA+F FNK+QFADLM+I G+AG +SQL+LMP+
Sbjct: 245 VTLSQAAVVAFFYSLAEVGLHASLLYYLKARFHFNKDQFADLMVITGIAGTLSQLVLMPI 304
Query: 72 LAPCLDEVKLLRIGLFAGCANIFL 1
LAP L E +LL +GLF C ++FL
Sbjct: 305 LAPALGEARLLAVGLFFTCVHVFL 328
>emb|CAN64703.1| hypothetical protein VITISV_038996 [Vitis vinifera]
Length = 408
Score = 377 bits (968), Expect = e-102
Identities = 196/318 (61%), Positives = 249/318 (78%), Gaps = 1/318 (0%)
Frame = -1
Query: 957 HLFVTVFLYSFSTFMVIPSITDVTMSALCPGQNECSLAIYLSGFQQAVTGVGSLVMMPVV 778
HLF+TVFL++F+TFMVIP+ITDVTM+ALCPG++ECS+AIYL+GFQQ + G+G+LVMMP+V
Sbjct: 9 HLFMTVFLFNFATFMVIPAITDVTMAALCPGRDECSIAIYLTGFQQVIIGLGTLVMMPLV 68
Query: 777 GNLSDVYGRKALLTIPMALTVVPLAILAXXXXXXXXXXXYLIKLLTAMFCEGSVQCLSLA 598
GNLSD+YGRKALLTIPM LT++PLAILA +++K LT+M CEGSV CL+LA
Sbjct: 69 GNLSDMYGRKALLTIPMCLTIIPLAILAWSRSRNFFYAYFVLKTLTSMVCEGSVHCLTLA 128
Query: 597 YVADNIEEGRRAAAFGMLAGVGSSAFVCGTLSARFLSTSSTFQVSAFVAVLATVYMKTFL 418
YVADNI E RRA+AFG+L+GVGSSAFVCGTLSARFL TSSTFQV+A VA +A VYMK FL
Sbjct: 129 YVADNIPEIRRASAFGVLSGVGSSAFVCGTLSARFLKTSSTFQVAASVAAVAAVYMKLFL 188
Query: 417 VDSGYQK-IIDATSPLLSNTKDHAKLSSADGNSCPKMRTGKKIPSVTDMVQLLCSSVTFT 241
DS + ++D + + + DG S K +PS+ DM+ LL +S TFT
Sbjct: 189 PDSVIKDGVLDR-----AILEQKPCVIHLDGESAQDSPVFKSMPSLDDMLSLLQTSSTFT 243
Query: 240 QAAVVAFFSSLAESGLHASLLFYLKAQFQFNKNQFADLMLIAGLAGAISQLLLMPMLAPC 61
+AA+VAFFS+L + GLH SL++YLKA+F FNK+QFADLM+I+G+AG ISQL+LMP+LAP
Sbjct: 244 KAAIVAFFSNLGDVGLHTSLMYYLKARFHFNKHQFADLMMISGIAGTISQLVLMPILAPT 303
Query: 60 LDEVKLLRIGLFAGCANI 7
+ E KLL IGL C++I
Sbjct: 304 IGEEKLLAIGLLFSCSHI 321