BLASTX nr result

ID: Coptis23_contig00010562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010562
         (666 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285478.2| PREDICTED: cysteinyl-tRNA synthetase-like [V...   134   1e-29
emb|CBI21127.3| unnamed protein product [Vitis vinifera]              134   1e-29
ref|XP_002881161.1| tRNA synthetase class I (C) family protein [...   134   2e-29
ref|NP_001077986.1| cysteinyl-tRNA synthetase [Arabidopsis thali...   134   2e-29
gb|AAK43958.1|AF370143_1 putative cysteinyl-tRNA synthetase [Ara...   134   2e-29

>ref|XP_002285478.2| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
          Length = 571

 Score =  134 bits (338), Expect = 1e-29
 Identities = 61/66 (92%), Positives = 64/66 (96%)
 Frame = +3

Query: 3   AYLGYSFDIHGGGVDLVFPHHENEIAQSCAACNKSNISYWIHNGFVNIDNEKMSKSLGNF 182
           AYLGYSFDIHGGG+DLVFPHHENEIAQSCAAC +SNISYWIHNGFV ID+EKMSKSLGNF
Sbjct: 287 AYLGYSFDIHGGGMDLVFPHHENEIAQSCAACKQSNISYWIHNGFVTIDSEKMSKSLGNF 346

Query: 183 FTIRQV 200
           FTIRQV
Sbjct: 347 FTIRQV 352



 Score = 95.9 bits (237), Expect = 6e-18
 Identities = 47/74 (63%), Positives = 57/74 (77%)
 Frame = +1

Query: 445 TLCDCEEVLSQHHEADCKDNIPPATQTCIDKFHNDFEISMLDDLHTPVVLAAMSEPLKTI 624
           TL DC+  + Q  +   KD++PP    CI+KF+NDF  SM DDLHTPVVLAA+S+PLKTI
Sbjct: 394 TLHDCQNAMDQD-DMTKKDSVPPHILDCINKFYNDFLTSMSDDLHTPVVLAALSDPLKTI 452

Query: 625 NDLLHIRQGKKQEL 666
           NDLLH R+GKKQEL
Sbjct: 453 NDLLHTRKGKKQEL 466


>emb|CBI21127.3| unnamed protein product [Vitis vinifera]
          Length = 474

 Score =  134 bits (338), Expect = 1e-29
 Identities = 61/66 (92%), Positives = 64/66 (96%)
 Frame = +3

Query: 3   AYLGYSFDIHGGGVDLVFPHHENEIAQSCAACNKSNISYWIHNGFVNIDNEKMSKSLGNF 182
           AYLGYSFDIHGGG+DLVFPHHENEIAQSCAAC +SNISYWIHNGFV ID+EKMSKSLGNF
Sbjct: 190 AYLGYSFDIHGGGMDLVFPHHENEIAQSCAACKQSNISYWIHNGFVTIDSEKMSKSLGNF 249

Query: 183 FTIRQV 200
           FTIRQV
Sbjct: 250 FTIRQV 255



 Score = 95.9 bits (237), Expect = 6e-18
 Identities = 47/74 (63%), Positives = 57/74 (77%)
 Frame = +1

Query: 445 TLCDCEEVLSQHHEADCKDNIPPATQTCIDKFHNDFEISMLDDLHTPVVLAAMSEPLKTI 624
           TL DC+  + Q  +   KD++PP    CI+KF+NDF  SM DDLHTPVVLAA+S+PLKTI
Sbjct: 297 TLHDCQNAMDQD-DMTKKDSVPPHILDCINKFYNDFLTSMSDDLHTPVVLAALSDPLKTI 355

Query: 625 NDLLHIRQGKKQEL 666
           NDLLH R+GKKQEL
Sbjct: 356 NDLLHTRKGKKQEL 369


>ref|XP_002881161.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297327000|gb|EFH57420.1| tRNA
           synthetase class I (C) family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 562

 Score =  134 bits (337), Expect = 2e-29
 Identities = 60/66 (90%), Positives = 64/66 (96%)
 Frame = +3

Query: 3   AYLGYSFDIHGGGVDLVFPHHENEIAQSCAACNKSNISYWIHNGFVNIDNEKMSKSLGNF 182
           AYLGYSFDIHGGG+DLVFPHHENEIAQSCAAC+ SNISYWIHNGFV +D+EKMSKSLGNF
Sbjct: 277 AYLGYSFDIHGGGMDLVFPHHENEIAQSCAACDSSNISYWIHNGFVTVDSEKMSKSLGNF 336

Query: 183 FTIRQV 200
           FTIRQV
Sbjct: 337 FTIRQV 342



 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 41/72 (56%), Positives = 51/72 (70%)
 Frame = +1

Query: 445 TLCDCEEVLSQHHEADCKDNIPPATQTCIDKFHNDFEISMLDDLHTPVVLAAMSEPLKTI 624
           TL DCE +L +       D++P  T T I+ FH++F  SM DDL TPV LAAMSEPLKTI
Sbjct: 384 TLHDCESLLGEKDSTFGNDSVPSDTLTTINTFHSEFVASMSDDLLTPVTLAAMSEPLKTI 443

Query: 625 NDLLHIRQGKKQ 660
           ND++H R+GKKQ
Sbjct: 444 NDIIHTRKGKKQ 455


>ref|NP_001077986.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
           gi|330253409|gb|AEC08503.1| cysteinyl-tRNA synthetase
           [Arabidopsis thaliana]
          Length = 401

 Score =  134 bits (337), Expect = 2e-29
 Identities = 60/66 (90%), Positives = 64/66 (96%)
 Frame = +3

Query: 3   AYLGYSFDIHGGGVDLVFPHHENEIAQSCAACNKSNISYWIHNGFVNIDNEKMSKSLGNF 182
           AYLGYSFDIHGGG+DLVFPHHENEIAQSCAAC+ SNISYWIHNGFV +D+EKMSKSLGNF
Sbjct: 115 AYLGYSFDIHGGGMDLVFPHHENEIAQSCAACDSSNISYWIHNGFVTVDSEKMSKSLGNF 174

Query: 183 FTIRQV 200
           FTIRQV
Sbjct: 175 FTIRQV 180



 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 40/72 (55%), Positives = 47/72 (65%)
 Frame = +1

Query: 445 TLCDCEEVLSQHHEADCKDNIPPATQTCIDKFHNDFEISMLDDLHTPVVLAAMSEPLKTI 624
           TL DCE  L +        ++P  T T I+ F  +F  SM DDL TPV LAAMSEPLKTI
Sbjct: 222 TLHDCESALGEKDSTFENGSVPSDTLTSINTFRTEFVASMSDDLLTPVTLAAMSEPLKTI 281

Query: 625 NDLLHIRQGKKQ 660
           NDL+H R+GKKQ
Sbjct: 282 NDLIHTRKGKKQ 293


>gb|AAK43958.1|AF370143_1 putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
           gi|15293251|gb|AAK93736.1| putative cysteinyl-tRNA
           synthetase [Arabidopsis thaliana]
           gi|20197327|gb|AAM15026.1| putative cysteinyl-tRNA
           synthetase [Arabidopsis thaliana]
           gi|20197896|gb|AAD20662.2| putative cysteinyl-tRNA
           synthetase [Arabidopsis thaliana]
          Length = 493

 Score =  134 bits (337), Expect = 2e-29
 Identities = 60/66 (90%), Positives = 64/66 (96%)
 Frame = +3

Query: 3   AYLGYSFDIHGGGVDLVFPHHENEIAQSCAACNKSNISYWIHNGFVNIDNEKMSKSLGNF 182
           AYLGYSFDIHGGG+DLVFPHHENEIAQSCAAC+ SNISYWIHNGFV +D+EKMSKSLGNF
Sbjct: 207 AYLGYSFDIHGGGMDLVFPHHENEIAQSCAACDSSNISYWIHNGFVTVDSEKMSKSLGNF 266

Query: 183 FTIRQV 200
           FTIRQV
Sbjct: 267 FTIRQV 272



 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 40/72 (55%), Positives = 47/72 (65%)
 Frame = +1

Query: 445 TLCDCEEVLSQHHEADCKDNIPPATQTCIDKFHNDFEISMLDDLHTPVVLAAMSEPLKTI 624
           TL DCE  L +        ++P  T T I+ F  +F  SM DDL TPV LAAMSEPLKTI
Sbjct: 314 TLHDCESALGEKDSTFENGSVPSDTLTSINTFRTEFVASMSDDLLTPVTLAAMSEPLKTI 373

Query: 625 NDLLHIRQGKKQ 660
           NDL+H R+GKKQ
Sbjct: 374 NDLIHTRKGKKQ 385


Top