BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010555
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_974970.1| DHBP synthase RibB-like alpha/beta domain-conta...    65   6e-09
ref|NP_568924.1| DHBP synthase RibB-like alpha/beta domain-conta...    65   6e-09
ref|XP_002864693.1| hypothetical protein ARALYDRAFT_358267 [Arab...    64   1e-08
ref|XP_002879291.1| hypothetical protein ARALYDRAFT_482017 [Arab...    62   4e-08
dbj|BAB09832.1| unnamed protein product [Arabidopsis thaliana]         60   1e-07

>ref|NP_974970.1| DHBP synthase RibB-like alpha/beta domain-containing protein
           [Arabidopsis thaliana] gi|332009969|gb|AED97352.1| DHBP
           synthase RibB-like alpha/beta domain-containing protein
           [Arabidopsis thaliana]
          Length = 288

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 40/93 (43%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
 Frame = +3

Query: 96  LSSRAIPSLR-FALH*NKRYFGGFLCKKMLWESRRCDTSVVMKTAMERKGVIVPGKEEFA 272
           L  + +  LR F++    R     L KKM+W   R +T VV K+ +     + P  E +A
Sbjct: 22  LLRKGVSELRCFSIANQSRRLRWGLQKKMVWSLERAETCVVSKSCL-----VHPATEAYA 76

Query: 273 DNAIIAIKEEKSIVVPPNTLYGSACDACSLVTV 371
             AI AIK EK I VP +TLYG ACDACSL  V
Sbjct: 77  QEAIEAIKSEKVIAVPTDTLYGFACDACSLEAV 109


>ref|NP_568924.1| DHBP synthase RibB-like alpha/beta domain-containing protein
           [Arabidopsis thaliana]
           gi|14190379|gb|AAK55670.1|AF378867_1 AT5g60590/muf9_240
           [Arabidopsis thaliana] gi|15215871|gb|AAK91479.1|
           AT5g60590/muf9_240 [Arabidopsis thaliana]
           gi|332009968|gb|AED97351.1| DHBP synthase RibB-like
           alpha/beta domain-containing protein [Arabidopsis
           thaliana]
          Length = 164

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 40/93 (43%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
 Frame = +3

Query: 96  LSSRAIPSLR-FALH*NKRYFGGFLCKKMLWESRRCDTSVVMKTAMERKGVIVPGKEEFA 272
           L  + +  LR F++    R     L KKM+W   R +T VV K+ +     + P  E +A
Sbjct: 22  LLRKGVSELRCFSIANQSRRLRWGLQKKMVWSLERAETCVVSKSCL-----VHPATEAYA 76

Query: 273 DNAIIAIKEEKSIVVPPNTLYGSACDACSLVTV 371
             AI AIK EK I VP +TLYG ACDACSL  V
Sbjct: 77  QEAIEAIKSEKVIAVPTDTLYGFACDACSLEAV 109


>ref|XP_002864693.1| hypothetical protein ARALYDRAFT_358267 [Arabidopsis lyrata subsp.
           lyrata] gi|297310528|gb|EFH40952.1| hypothetical protein
           ARALYDRAFT_358267 [Arabidopsis lyrata subsp. lyrata]
          Length = 284

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 40/93 (43%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
 Frame = +3

Query: 96  LSSRAIPSLR-FALH*NKRYFGGFLCKKMLWESRRCDTSVVMKTAMERKGVIVPGKEEFA 272
           L  + I  LR F++  + R     L KKM+W   R +T VV  + +     + P  E +A
Sbjct: 22  LLRKGISELRCFSIANHSRRLRWGLQKKMVWSLERAETCVVSNSCL-----VHPATEAYA 76

Query: 273 DNAIIAIKEEKSIVVPPNTLYGSACDACSLVTV 371
             AI AIK EK I VP +TLYG ACDACSL  V
Sbjct: 77  QEAIEAIKSEKVIAVPTDTLYGFACDACSLEAV 109


>ref|XP_002879291.1| hypothetical protein ARALYDRAFT_482017 [Arabidopsis lyrata subsp.
           lyrata] gi|297325130|gb|EFH55550.1| hypothetical protein
           ARALYDRAFT_482017 [Arabidopsis lyrata subsp. lyrata]
          Length = 263

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 39/92 (42%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
 Frame = +3

Query: 105 RAIPSLRF---ALH*NKRYFGGFLCKKMLWESRRCDTSVVMKTAMERKGVIVPGKEEFAD 275
           + +  LRF   A H  +  +G  L KKM+W   R +T VV  + +     + P  E +A 
Sbjct: 25  KGVSELRFFSIANHSRRLRWG--LQKKMVWSLERAETCVVSNSCL-----VHPATEAYAQ 77

Query: 276 NAIIAIKEEKSIVVPPNTLYGSACDACSLVTV 371
            AI AIK +K I VP +TLYG ACDACSL  V
Sbjct: 78  EAIEAIKSDKVIAVPTDTLYGFACDACSLEAV 109


>dbj|BAB09832.1| unnamed protein product [Arabidopsis thaliana]
          Length = 239

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/65 (49%), Positives = 39/65 (60%)
 Frame = +3

Query: 177 MLWESRRCDTSVVMKTAMERKGVIVPGKEEFADNAIIAIKEEKSIVVPPNTLYGSACDAC 356
           M+W   R +T VV K+ +     + P  E +A  AI AIK EK I VP +TLYG ACDAC
Sbjct: 1   MVWSLERAETCVVSKSCL-----VHPATEAYAQEAIEAIKSEKVIAVPTDTLYGFACDAC 55

Query: 357 SLVTV 371
           SL  V
Sbjct: 56  SLEAV 60