BLASTX nr result

ID: Coptis23_contig00010546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010546
         (694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263612.1| PREDICTED: uncharacterized protein LOC100256...    98   2e-18
emb|CAN68394.1| hypothetical protein VITISV_042519 [Vitis vinifera]    95   1e-17
ref|XP_003531474.1| PREDICTED: probable GMP synthase [glutamine-...    87   2e-15
ref|XP_003545728.1| PREDICTED: uncharacterized protein LOC100793...    87   4e-15
ref|XP_002315089.1| predicted protein [Populus trichocarpa] gi|2...    86   7e-15

>ref|XP_002263612.1| PREDICTED: uncharacterized protein LOC100256507 [Vitis vinifera]
           gi|297738175|emb|CBI27376.3| unnamed protein product
           [Vitis vinifera]
          Length = 398

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 69/135 (51%), Positives = 82/135 (60%), Gaps = 11/135 (8%)
 Frame = -2

Query: 690 MCSSKAKPCQGGVLVDLISPPLAEIDGRPVLQPGGNRVPISLERRNSLKKLSPK------ 529
           MCSSK+K  QG   +D I+P  A+I+GRP LQP  NR+P SLER +S KK+SPK      
Sbjct: 1   MCSSKSKLHQG---ID-ITPSKAQINGRPALQPTCNRIP-SLERHHSFKKISPKSPTSPL 55

Query: 528 -ARPSPPTS--NTHKTKPLXXXXXXXXXXXXXXXXPALKRGNDPNGLTSSVDKTLTPRST 358
            A P PPT+  NT KTKP                 PALKRGNDPNGL SS++K LTPR T
Sbjct: 56  PASPPPPTTIINTTKTKP--SLTPPASPNLKSPRQPALKRGNDPNGLNSSLEKVLTPRGT 113

Query: 357 PKLVR--KKSKKSTA 319
            K     KK+KK +A
Sbjct: 114 TKSSSSPKKTKKCSA 128



 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 40/61 (65%), Positives = 50/61 (81%)
 Frame = -1

Query: 184 VVPTLEFSSLNYSSLSIVESPGSIAAARREQVTLLQAQRKMRIAHYGRTNSGKFEGKVVP 5
           + P+ + SSLNYSS  IVE+PGSIAAARREQ+ ++Q QRKMRIAHYGRT S K+E K+ P
Sbjct: 130 LAPSSDTSSLNYSSSLIVEAPGSIAAARREQMAIMQVQRKMRIAHYGRTKSAKYEEKIGP 189

Query: 4   L 2
           +
Sbjct: 190 V 190


>emb|CAN68394.1| hypothetical protein VITISV_042519 [Vitis vinifera]
          Length = 398

 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 68/135 (50%), Positives = 82/135 (60%), Gaps = 11/135 (8%)
 Frame = -2

Query: 690 MCSSKAKPCQGGVLVDLISPPLAEIDGRPVLQPGGNRVPISLERRNSLKKLSPKARPSP- 514
           MCSSK+K  QG   +D I+P  A+I+GRP LQP  NR+P SLER +S KK+SPK+  SP 
Sbjct: 1   MCSSKSKLHQG---ID-ITPSKAQINGRPALQPTCNRIP-SLERHHSFKKISPKSPTSPL 55

Query: 513 ------PTS--NTHKTKPLXXXXXXXXXXXXXXXXPALKRGNDPNGLTSSVDKTLTPRST 358
                 PT+  NT KTKP                 PALKRGNDPNGL SS++K LTPR T
Sbjct: 56  PASLPPPTTIINTTKTKP--SLTPPASPNLKSPRQPALKRGNDPNGLNSSLEKVLTPRGT 113

Query: 357 PKLVR--KKSKKSTA 319
            K     KK+KK +A
Sbjct: 114 TKSSSSPKKTKKCSA 128



 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 40/61 (65%), Positives = 50/61 (81%)
 Frame = -1

Query: 184 VVPTLEFSSLNYSSLSIVESPGSIAAARREQVTLLQAQRKMRIAHYGRTNSGKFEGKVVP 5
           + P+ + SSLNYSS  IVE+PGSIAAARREQ+ ++Q QRKMRIAHYGRT S K+E K+ P
Sbjct: 130 LAPSSDTSSLNYSSSFIVEAPGSIAAARREQMAIMQVQRKMRIAHYGRTKSAKYEEKISP 189

Query: 4   L 2
           +
Sbjct: 190 V 190


>ref|XP_003531474.1| PREDICTED: probable GMP synthase [glutamine-hydrolyzing]-like
           [Glycine max]
          Length = 400

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 61/128 (47%), Positives = 72/128 (56%), Gaps = 8/128 (6%)
 Frame = -2

Query: 690 MCSSKAKPCQG-GVLVDLISPPLAEIDGRPVLQPGGNRVPISLERRNSLKKLSPKARPSP 514
           MCSSK K   G   +V    P +A I+GRPVLQP  NRVP +LERRNS+KK++P    SP
Sbjct: 1   MCSSKTKVTVGLEAVVAAAKPSVARINGRPVLQPTCNRVP-NLERRNSIKKVAPPKSLSP 59

Query: 513 PT----SNTHKTKPLXXXXXXXXXXXXXXXXPALKRGNDPNGLTSSVDKTLTPRS---TP 355
           P+    S T  T P+                 A KRGND NGL SS +K + PRS   TP
Sbjct: 60  PSPPLPSKTSLTPPVSPKLKSPRLP-------ATKRGNDNNGLNSSYEKIVIPRSSTKTP 112

Query: 354 KLVRKKSK 331
            L RKKSK
Sbjct: 113 TLERKKSK 120



 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 41/64 (64%), Positives = 50/64 (78%)
 Frame = -1

Query: 193 GGIVVPTLEFSSLNYSSLSIVESPGSIAAARREQVTLLQAQRKMRIAHYGRTNSGKFEGK 14
           G  V  ++E +SL+YSS  I +SPGSIAA RREQ+ L QAQRKM+IAHYGR+ S KFE +
Sbjct: 125 GSCVSASIE-ASLSYSSSLITDSPGSIAAVRREQMALQQAQRKMKIAHYGRSKSAKFE-R 182

Query: 13  VVPL 2
           VVPL
Sbjct: 183 VVPL 186


>ref|XP_003545728.1| PREDICTED: uncharacterized protein LOC100793449 [Glycine max]
          Length = 398

 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 61/126 (48%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
 Frame = -2

Query: 690 MCSSKAKPCQGGVLVDLISPPLAEIDGRPVLQPGGNRVPISLERRNSLKKLSPKAR--PS 517
           MC SK K   G  +    +  +A I+GRPVLQP  NRVP +LERRNS+KKLSPK+R  PS
Sbjct: 1   MCGSKTKVTVG--IEATATSLVARINGRPVLQPTCNRVP-NLERRNSIKKLSPKSRSPPS 57

Query: 516 PPT-SNTHKTKPLXXXXXXXXXXXXXXXXPALKRGNDPNGLTSSVDKTLTPRS---TPKL 349
           PP  S T  T P+                  +KRGN+ NGL SS +K +TPR+   TP L
Sbjct: 58  PPLLSKTSLTPPVSPKSKSPRPPP-------IKRGNESNGLNSSSEKIVTPRNTIKTPTL 110

Query: 348 VRKKSK 331
            RKKSK
Sbjct: 111 ERKKSK 116



 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 36/54 (66%), Positives = 43/54 (79%)
 Frame = -1

Query: 163 SSLNYSSLSIVESPGSIAAARREQVTLLQAQRKMRIAHYGRTNSGKFEGKVVPL 2
           +SL+YSS  I ESPGSIAA RREQ+ L  AQRKM+IAHYGR+ S KF  +V+PL
Sbjct: 134 ASLSYSSTLITESPGSIAAVRREQMALQHAQRKMKIAHYGRSKSAKF-ARVIPL 186


>ref|XP_002315089.1| predicted protein [Populus trichocarpa] gi|222864129|gb|EEF01260.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score = 85.9 bits (211), Expect = 7e-15
 Identities = 64/141 (45%), Positives = 76/141 (53%), Gaps = 12/141 (8%)
 Frame = -2

Query: 690 MCSSKAKPCQGGVLVDLISPPLAEIDGRPVLQPGGNRVPISLERRNSLKKLSPKARPSPP 511
           MCSS AK   G      I+P +A I+GRPVLQP  NRVP +LER NSLKK +PK+ P PP
Sbjct: 1   MCSSNAKVTTGVE----ITPAVARINGRPVLQPTCNRVP-TLERHNSLKKTAPKSPPPPP 55

Query: 510 --------TSNTHKTKPLXXXXXXXXXXXXXXXXPALKRGNDPNGLTSSVDKTLTPRS-- 361
                    + T+K  P                 PA+KRG+D N L SS DK + PRS  
Sbjct: 56  PPLPPPTSANKTNKASP------PLSPKSKSPRLPAIKRGSDANSLNSSSDKVVIPRSTA 109

Query: 360 -TPKLVRKKSKK-STANNGSG 304
            TP L RKKSK     + GSG
Sbjct: 110 KTPILERKKSKSFKETSVGSG 130



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 38/54 (70%), Positives = 45/54 (83%)
 Frame = -1

Query: 163 SSLNYSSLSIVESPGSIAAARREQVTLLQAQRKMRIAHYGRTNSGKFEGKVVPL 2
           +SL+YSS  IVE+PGSIAA RREQ+ L  AQRKMRIAHYGR+ S +FE KVVP+
Sbjct: 138 ASLSYSSSLIVEAPGSIAAVRREQMALQHAQRKMRIAHYGRSKSSRFEAKVVPV 191


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