BLASTX nr result

ID: Coptis23_contig00010528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010528
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326616.1| predicted protein [Populus trichocarpa] gi|2...    54   2e-14
ref|XP_002514828.1| Trichohyalin, putative [Ricinus communis] gi...    52   5e-12
ref|XP_002270435.1| PREDICTED: protein KRI1 homolog [Vitis vinif...    55   6e-12
ref|XP_003594541.1| KRI1-like protein [Medicago truncatula] gi|3...    51   5e-11
ref|XP_004151681.1| PREDICTED: protein kri1-like, partial [Cucum...    49   1e-10

>ref|XP_002326616.1| predicted protein [Populus trichocarpa] gi|222833938|gb|EEE72415.1|
           predicted protein [Populus trichocarpa]
          Length = 622

 Score = 53.5 bits (127), Expect(2) = 2e-14
 Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 5/64 (7%)
 Frame = -3

Query: 199 HLIEDGPDMDDE-GASEKLG-VKKSYNEEQEELRKSFLDASKGAFGSEDDGD---LLTEK 35
           HLIE GP++DDE G+S K     KSYN+EQEELRK+FLDA +     E+DG+   L  ++
Sbjct: 129 HLIEKGPELDDEEGSSIKTKRADKSYNDEQEELRKAFLDAVE---DEEEDGEQEFLKLKE 185

Query: 34  KRNE 23
           ++NE
Sbjct: 186 RKNE 189



 Score = 50.4 bits (119), Expect(2) = 2e-14
 Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 6/71 (8%)
 Frame = -1

Query: 396 SDDESDLKSGKSFLELYDNLIKIRNKDPSIFDNKDAKLFQSD------XXXXXXXXXXXX 235
           S DE+D+K  K+ ++ +DNL+K++N+DPS++ N  AKLF+SD                  
Sbjct: 61  SSDETDIK--KTDIKFFDNLLKVKNRDPSLYSN--AKLFESDSSDTEEEDIKVGNEKHTK 116

Query: 234 XKPMYLKDVVA 202
            KPMYLKDV+A
Sbjct: 117 KKPMYLKDVMA 127


>ref|XP_002514828.1| Trichohyalin, putative [Ricinus communis]
           gi|223545879|gb|EEF47382.1| Trichohyalin, putative
           [Ricinus communis]
          Length = 640

 Score = 51.6 bits (122), Expect(2) = 5e-12
 Identities = 29/64 (45%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
 Frame = -3

Query: 196 LIEDGPDMDD-EGASEKLGVKKSYNEEQEELRKSFLDASKGAFGSEDDGDLLTEKKRNEG 20
           LIE+GP+ ++ E +S K   +K+Y EEQEEL+++FL+A K A  ++ DGDLL  K+++  
Sbjct: 141 LIEEGPEFEEGESSSAK---RKTYTEEQEELKRAFLEAVKDA--ADVDGDLLRVKEKDLK 195

Query: 19  EDED 8
           E++D
Sbjct: 196 EEDD 199



 Score = 43.9 bits (102), Expect(2) = 5e-12
 Identities = 21/44 (47%), Positives = 33/44 (75%), Gaps = 3/44 (6%)
 Frame = -1

Query: 393 DDESDLKS---GKSFLELYDNLIKIRNKDPSIFDNKDAKLFQSD 271
           +D++++K     KSF E ++NLIK++ +DPSI+  KD KLF+SD
Sbjct: 64  EDDAEIKKLSKKKSFKEFFNNLIKVKERDPSIY-KKDVKLFESD 106


>ref|XP_002270435.1| PREDICTED: protein KRI1 homolog [Vitis vinifera]
          Length = 637

 Score = 55.1 bits (131), Expect(2) = 6e-12
 Identities = 32/65 (49%), Positives = 43/65 (66%)
 Frame = -3

Query: 196 LIEDGPDMDDEGASEKLGVKKSYNEEQEELRKSFLDASKGAFGSEDDGDLLTEKKRNEGE 17
           LIE+G D DDE  +EK    KSY EEQEELR++FLDA++     +D G+LL+ K+    +
Sbjct: 135 LIEEGADYDDEEETEK-PKPKSYAEEQEELRRAFLDAAEEVM-EDDGGELLSMKENATEK 192

Query: 16  DEDED 2
           DE  D
Sbjct: 193 DESGD 197



 Score = 40.0 bits (92), Expect(2) = 6e-12
 Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = -1

Query: 393 DDESDLKSGKSFLELYDNLIKIRNKDPSIFDNKDAKLFQ-SDXXXXXXXXXXXXXKPMYL 217
           DDESD    +  L+ +D LIK++ +DPS+   KD +LF+  D             K MYL
Sbjct: 71  DDESD--GDEEDLQFFDALIKVKKQDPSL-KQKDTRLFEVKDSDETKAVKGEKSKKAMYL 127

Query: 216 KDVVA 202
           KDVVA
Sbjct: 128 KDVVA 132


>ref|XP_003594541.1| KRI1-like protein [Medicago truncatula] gi|355483589|gb|AES64792.1|
           KRI1-like protein [Medicago truncatula]
          Length = 658

 Score = 50.8 bits (120), Expect(2) = 5e-11
 Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 6/71 (8%)
 Frame = -3

Query: 199 HLIEDGPDM-DDEGASEKLGV----KKSYNEEQEELRKSFLDAS-KGAFGSEDDGDLLTE 38
           HLIE+GPD  D+E  + ++G+    KK+Y EEQEEL+++FL A+ K   G   D D LT 
Sbjct: 136 HLIEEGPDFGDEEDETNEIGISNGGKKTYAEEQEELKQAFLKAAEKDGLG---DADFLTL 192

Query: 37  KKRNEGEDEDE 5
           K++  GED+ E
Sbjct: 193 KEKT-GEDKVE 202



 Score = 41.2 bits (95), Expect(2) = 5e-11
 Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
 Frame = -1

Query: 396 SDDESDLKSGKSFLELYDNLIKIRNKDPSIFDNKDAKLFQSD----XXXXXXXXXXXXXK 229
           SDD+ +  + KS  E +D LIK++ KDP +   KD KLF+SD                 K
Sbjct: 67  SDDDVNNFNTKSDKEFFDALIKVKKKDP-VLKQKDVKLFESDHSSEDESDDEKSKDKEKK 125

Query: 228 PMYLKDVVA 202
            M+LKDVVA
Sbjct: 126 SMFLKDVVA 134


>ref|XP_004151681.1| PREDICTED: protein kri1-like, partial [Cucumis sativus]
          Length = 480

 Score = 48.5 bits (114), Expect(2) = 1e-10
 Identities = 26/66 (39%), Positives = 41/66 (62%)
 Frame = -3

Query: 199 HLIEDGPDMDDEGASEKLGVKKSYNEEQEELRKSFLDASKGAFGSEDDGDLLTEKKRNEG 20
           HLIE+GP+ +DE         K Y++EQEE+RK+FL+A++      D+ +LL  K+R   
Sbjct: 212 HLIEEGPEFNDENTKNV----KVYDKEQEEIRKAFLEAAE-VQNENDEEELLKVKERGTV 266

Query: 19  EDEDED 2
           E+E  +
Sbjct: 267 EEEKNE 272



 Score = 42.0 bits (97), Expect(2) = 1e-10
 Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
 Frame = -1

Query: 396 SDDESDLKSGKSFLELYDNLIKIRNKDPSIFDNKDAKLFQSD-------XXXXXXXXXXX 238
           S +E D ++ +  LE +D LIK++ KDP++   K+AKLF SD                  
Sbjct: 140 SSEEEDSQNFRKDLEFFDALIKVKKKDPTL-KQKEAKLFDSDDDSHAKESDDVKGSLTEK 198

Query: 237 XXKPMYLKDVVA 202
               MYLKDVVA
Sbjct: 199 KKSSMYLKDVVA 210


Top