BLASTX nr result

ID: Coptis23_contig00010521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010521
         (806 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266072.1| PREDICTED: anaphase-promoting complex subuni...   304   2e-80
ref|XP_002521569.1| anaphase-promoting complex, putative [Ricinu...   303   2e-80
gb|AFK44376.1| unknown [Medicago truncatula]                          299   4e-79
ref|XP_002310244.1| predicted protein [Populus trichocarpa] gi|2...   298   1e-78
ref|XP_002327795.1| predicted protein [Populus trichocarpa] gi|2...   295   1e-77

>ref|XP_002266072.1| PREDICTED: anaphase-promoting complex subunit 10 [Vitis vinifera]
           gi|297735140|emb|CBI17502.3| unnamed protein product
           [Vitis vinifera]
          Length = 192

 Score =  304 bits (778), Expect = 2e-80
 Identities = 150/193 (77%), Positives = 164/193 (84%), Gaps = 1/193 (0%)
 Frame = -3

Query: 708 MATES-DGEEEGKLIGNGNQSLTVAEELREMAKNAAWSVSSCKTGNGVQFLRDDNLDTFW 532
           MATES +GEEEGK+IG GNQ L V E+LREMAK AAWSVSSCK GNGV  LRDDNLDT+W
Sbjct: 1   MATESSEGEEEGKMIG-GNQHLVVDEDLREMAKKAAWSVSSCKAGNGVLLLRDDNLDTYW 59

Query: 531 QSDGAQPHLVNIXXXXXXXXXXXXLYVDFKLDESYTPSKISVRAGDGFHNLKEIKCVELV 352
           QSDGAQPHLVNI            +YVDFKLDESYTPSKIS+RAGDGFHNLKEIK VELV
Sbjct: 60  QSDGAQPHLVNIQFLKKVKLQLVVIYVDFKLDESYTPSKISIRAGDGFHNLKEIKTVELV 119

Query: 351 KPVGWIYISLSGTDPREVFVNTFMLQIAVISNHLNGRDTHLRQIKIYGPRLNPVPCQPFQ 172
           KP GW+YISLSG DPRE FVNTFMLQIA++SNHLNGRDTH+RQIK+YGP  NP+P QPFQ
Sbjct: 120 KPTGWVYISLSGNDPRETFVNTFMLQIAILSNHLNGRDTHVRQIKVYGPPPNPIPRQPFQ 179

Query: 171 FTSKEFITYSILR 133
           FTS+EFITYS +R
Sbjct: 180 FTSREFITYSSVR 192


>ref|XP_002521569.1| anaphase-promoting complex, putative [Ricinus communis]
           gi|223539247|gb|EEF40840.1| anaphase-promoting complex,
           putative [Ricinus communis]
          Length = 192

 Score =  303 bits (777), Expect = 2e-80
 Identities = 150/193 (77%), Positives = 164/193 (84%), Gaps = 1/193 (0%)
 Frame = -3

Query: 708 MATES-DGEEEGKLIGNGNQSLTVAEELREMAKNAAWSVSSCKTGNGVQFLRDDNLDTFW 532
           MATES +GEEEGK+ G GNQ L V ++LREM K AAWSVSSCK GNGV  LRDDNLD+FW
Sbjct: 1   MATESSEGEEEGKITG-GNQHLVVDDDLREMGKKAAWSVSSCKPGNGVSSLRDDNLDSFW 59

Query: 531 QSDGAQPHLVNIXXXXXXXXXXXXLYVDFKLDESYTPSKISVRAGDGFHNLKEIKCVELV 352
           QSDGAQPHLVNI            LYVDFKLDESYTPSKIS+RAGDGFHNLKEIK VELV
Sbjct: 60  QSDGAQPHLVNIQFQKKVKLQLVLLYVDFKLDESYTPSKISIRAGDGFHNLKEIKTVELV 119

Query: 351 KPVGWIYISLSGTDPREVFVNTFMLQIAVISNHLNGRDTHLRQIKIYGPRLNPVPCQPFQ 172
           KP GW+Y+SLSG DPRE FVNTFMLQIAV+SNHLNGRDTH+RQIK+YGPRLNP+P QPFQ
Sbjct: 120 KPTGWVYLSLSGNDPRETFVNTFMLQIAVLSNHLNGRDTHVRQIKVYGPRLNPIPHQPFQ 179

Query: 171 FTSKEFITYSILR 133
           FTS+EFITYS +R
Sbjct: 180 FTSREFITYSSVR 192


>gb|AFK44376.1| unknown [Medicago truncatula]
          Length = 196

 Score =  299 bits (766), Expect = 4e-79
 Identities = 149/194 (76%), Positives = 162/194 (83%), Gaps = 1/194 (0%)
 Frame = -3

Query: 711 EMATES-DGEEEGKLIGNGNQSLTVAEELREMAKNAAWSVSSCKTGNGVQFLRDDNLDTF 535
           EMA ES +GEEEGKL G GNQ L V E+LRE+ K AAWSVSSCKTGNGV  LRDDNL+T+
Sbjct: 4   EMAAESSEGEEEGKLSG-GNQVLIVDEDLRELGKKAAWSVSSCKTGNGVSSLRDDNLETY 62

Query: 534 WQSDGAQPHLVNIXXXXXXXXXXXXLYVDFKLDESYTPSKISVRAGDGFHNLKEIKCVEL 355
           WQSDGAQPH VNI            LYVDFKLDESYTPSKIS+RAGDGFHNLKEIK VEL
Sbjct: 63  WQSDGAQPHFVNIQFQKKVRLQLVVLYVDFKLDESYTPSKISIRAGDGFHNLKEIKAVEL 122

Query: 354 VKPVGWIYISLSGTDPREVFVNTFMLQIAVISNHLNGRDTHLRQIKIYGPRLNPVPCQPF 175
           VKP GW+Y+SLSG DPRE FVNTFMLQIAV+SNHLNGRDTH+RQIK+YGPR NP+P QPF
Sbjct: 123 VKPTGWLYLSLSGLDPRETFVNTFMLQIAVLSNHLNGRDTHVRQIKVYGPRPNPIPQQPF 182

Query: 174 QFTSKEFITYSILR 133
           QFTS EFITYS +R
Sbjct: 183 QFTSTEFITYSTIR 196


>ref|XP_002310244.1| predicted protein [Populus trichocarpa] gi|222853147|gb|EEE90694.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score =  298 bits (762), Expect = 1e-78
 Identities = 146/193 (75%), Positives = 163/193 (84%), Gaps = 1/193 (0%)
 Frame = -3

Query: 708 MATES-DGEEEGKLIGNGNQSLTVAEELREMAKNAAWSVSSCKTGNGVQFLRDDNLDTFW 532
           MATES +GEEEGK+ G GN+ L + ++LREM K AAWSVSSCK GNGV  LRDDNLDT+W
Sbjct: 1   MATESSEGEEEGKITG-GNKLLVIEDDLREMGKKAAWSVSSCKPGNGVSSLRDDNLDTYW 59

Query: 531 QSDGAQPHLVNIXXXXXXXXXXXXLYVDFKLDESYTPSKISVRAGDGFHNLKEIKCVELV 352
           QSDGAQPHLVNI            LYVDFKLDESYTPSKIS+RAGDGFHNLKEIK +ELV
Sbjct: 60  QSDGAQPHLVNIQFQKKVKLQLVVLYVDFKLDESYTPSKISIRAGDGFHNLKEIKTMELV 119

Query: 351 KPVGWIYISLSGTDPREVFVNTFMLQIAVISNHLNGRDTHLRQIKIYGPRLNPVPCQPFQ 172
           KP GW+Y+SLSG DPRE FVNTFMLQIAV+SNHLNGRDTH+RQIK+YGP+LNP P QPFQ
Sbjct: 120 KPTGWVYLSLSGNDPRETFVNTFMLQIAVLSNHLNGRDTHVRQIKVYGPQLNPFPHQPFQ 179

Query: 171 FTSKEFITYSILR 133
           FTS+EFITYS +R
Sbjct: 180 FTSREFITYSSVR 192


>ref|XP_002327795.1| predicted protein [Populus trichocarpa] gi|222836880|gb|EEE75273.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score =  295 bits (754), Expect = 1e-77
 Identities = 145/193 (75%), Positives = 161/193 (83%), Gaps = 1/193 (0%)
 Frame = -3

Query: 708 MATES-DGEEEGKLIGNGNQSLTVAEELREMAKNAAWSVSSCKTGNGVQFLRDDNLDTFW 532
           MATES +GEEEGK+ G GN+ L + ++LREM K AAWSVSSCK GNGV  LRDDNLDT+W
Sbjct: 1   MATESSEGEEEGKITG-GNKHLVIEDDLREMGKKAAWSVSSCKPGNGVSSLRDDNLDTYW 59

Query: 531 QSDGAQPHLVNIXXXXXXXXXXXXLYVDFKLDESYTPSKISVRAGDGFHNLKEIKCVELV 352
           QSDGAQPHLVNI            LYVDFKLDESYTPSKIS+RAGDGFHNLKEIK +ELV
Sbjct: 60  QSDGAQPHLVNIQFQKKVKLQLVVLYVDFKLDESYTPSKISIRAGDGFHNLKEIKTMELV 119

Query: 351 KPVGWIYISLSGTDPREVFVNTFMLQIAVISNHLNGRDTHLRQIKIYGPRLNPVPCQPFQ 172
           KP GW+Y+SLSG DPRE FVNTFMLQIAV+SNHLNGRDTH+RQIK+YGPR NP P QPFQ
Sbjct: 120 KPTGWVYLSLSGNDPRETFVNTFMLQIAVLSNHLNGRDTHVRQIKVYGPRPNPFPHQPFQ 179

Query: 171 FTSKEFITYSILR 133
           FTS+EFI YS +R
Sbjct: 180 FTSREFIMYSSVR 192


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