BLASTX nr result

ID: Coptis23_contig00010513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010513
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69615.1| hypothetical protein VITISV_016762 [Vitis vinifera]    62   5e-08
gb|ABQ85944.1| MADS-box transcription factor FUL-like 1 [Trochod...    61   8e-08
gb|ABQ85945.1| MADS-box transcription factor FUL-like 2 [Trochod...    61   1e-07
ref|XP_002316076.1| MIKC mads-box transcription factor APETALA1 ...    60   2e-07
gb|AEX60790.1| FUL-like protein [Berberis bealei]                      60   2e-07

>emb|CAN69615.1| hypothetical protein VITISV_016762 [Vitis vinifera]
          Length = 228

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/45 (64%), Positives = 36/45 (80%)
 Frame = +2

Query: 14  NSMECILERYQRYSHTSKDLVATDLESQGSLSFEYNKLKSRLETL 148
           NSME ILERY+RY++    L+ATDLESQGS + EY KLK+R+E L
Sbjct: 102 NSMERILERYERYAYAQSQLIATDLESQGSWTLEYAKLKARMEVL 146


>gb|ABQ85944.1| MADS-box transcription factor FUL-like 1 [Trochodendron aralioides]
          Length = 230

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/54 (55%), Positives = 39/54 (72%)
 Frame = +2

Query: 14  NSMECILERYQRYSHTSKDLVATDLESQGSLSFEYNKLKSRLETLYEEI*HGYG 175
           +SME ILERY+RYS+  ++LVATD ESQG+ S EY KLK+R++ L     H  G
Sbjct: 48  SSMEMILERYERYSYAERELVATDPESQGNWSLEYTKLKARIDLLQRNQSHFLG 101


>gb|ABQ85945.1| MADS-box transcription factor FUL-like 2 [Trochodendron aralioides]
          Length = 243

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/54 (57%), Positives = 37/54 (68%)
 Frame = +2

Query: 14  NSMECILERYQRYSHTSKDLVATDLESQGSLSFEYNKLKSRLETLYEEI*HGYG 175
           +SME ILERY+RYS+  ++LVA D ESQGS S EY KLK+R E L     H  G
Sbjct: 61  SSMERILERYERYSYAERELVAIDAESQGSWSLEYTKLKARFEVLQRNQRHFLG 114


>ref|XP_002316076.1| MIKC mads-box transcription factor APETALA1 [Populus trichocarpa]
           gi|47934201|gb|AAT39556.1| APETALA1-like MADS-box
           PTAP1-2 [Populus trichocarpa]
           gi|222865116|gb|EEF02247.1| MIKC mads-box transcription
           factor APETALA1 [Populus trichocarpa]
          Length = 248

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/45 (60%), Positives = 38/45 (84%)
 Frame = +2

Query: 14  NSMECILERYQRYSHTSKDLVATDLESQGSLSFEYNKLKSRLETL 148
           +SME ILERY+RYS+  + LVATDL+SQG+ + EYN+LK+++E L
Sbjct: 61  DSMEKILERYERYSYAERQLVATDLDSQGNWTLEYNRLKAKVELL 105


>gb|AEX60790.1| FUL-like protein [Berberis bealei]
          Length = 213

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/54 (51%), Positives = 40/54 (74%)
 Frame = +2

Query: 14  NSMECILERYQRYSHTSKDLVATDLESQGSLSFEYNKLKSRLETLYEEI*HGYG 175
           + M+ ILERY+RYS+  ++LVATD ESQG+ S EY+KLK+++E L +   H  G
Sbjct: 28  SGMDRILERYERYSYAERELVATDAESQGNWSLEYSKLKAKIEVLQKNQRHFLG 81


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