BLASTX nr result

ID: Coptis23_contig00010509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010509
         (899 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_197196.1| carbon-sulfur lyase [Arabidopsis thaliana] gi|2...   215   1e-53
ref|XP_002302935.1| predicted protein [Populus trichocarpa] gi|2...   212   1e-52
ref|XP_003538389.1| PREDICTED: centromere protein V-like [Glycin...   210   3e-52
emb|CBI34157.3| unnamed protein product [Vitis vinifera]              208   1e-51
ref|XP_002279711.1| PREDICTED: centromere protein V-like [Vitis ...   208   2e-51

>ref|NP_197196.1| carbon-sulfur lyase [Arabidopsis thaliana]
           gi|238481283|ref|NP_001154714.1| carbon-sulfur lyase
           [Arabidopsis thaliana] gi|9755695|emb|CAC01707.1|
           putative protein [Arabidopsis thaliana]
           gi|26451264|dbj|BAC42734.1| unknown protein [Arabidopsis
           thaliana] gi|28973087|gb|AAO63868.1| unknown protein
           [Arabidopsis thaliana] gi|332004977|gb|AED92360.1|
           carbon-sulfur lyase [Arabidopsis thaliana]
           gi|332004978|gb|AED92361.1| carbon-sulfur lyase
           [Arabidopsis thaliana]
          Length = 135

 Score =  215 bits (547), Expect = 1e-53
 Identities = 91/134 (67%), Positives = 111/134 (82%)
 Frame = -1

Query: 581 MDFERISHSGGCHCGKVRWEVLAPESVVAWKCNCSDCSMRGNIHFIVPSTCFKLAESSNK 402
           M+ E I H GGCHCGK++W V A  SV+AW CNCSDCSMRGN+HFIVPS+ F+L + S  
Sbjct: 1   MESELIFHEGGCHCGKIKWRVKAARSVIAWSCNCSDCSMRGNVHFIVPSSNFELLDDSKD 60

Query: 401 FLTAYTFGTHKAKHTFCKVCGITSFYLPRSNPDGIAVTLACVDSGTLSHVEIKCFDGRNW 222
           F+T YTFGTH AKHTFCKVCGITSFY+PRSNPDG+AVT+ CV SGTL+H+E+K +DG+NW
Sbjct: 61  FITTYTFGTHTAKHTFCKVCGITSFYIPRSNPDGVAVTVKCVKSGTLAHIEVKSYDGQNW 120

Query: 221 ERSYEHSSIASLSK 180
           E S++ + IAS SK
Sbjct: 121 EMSHKKTGIASFSK 134


>ref|XP_002302935.1| predicted protein [Populus trichocarpa] gi|222844661|gb|EEE82208.1|
           predicted protein [Populus trichocarpa]
          Length = 137

 Score =  212 bits (539), Expect = 1e-52
 Identities = 94/134 (70%), Positives = 106/134 (79%)
 Frame = -1

Query: 581 MDFERISHSGGCHCGKVRWEVLAPESVVAWKCNCSDCSMRGNIHFIVPSTCFKLAESSNK 402
           M+ + + H+GGCHC +VRW V AP SVVAW CNCSDCSMRGN HFIVPS  F L   S +
Sbjct: 1   MESDMVIHNGGCHCRRVRWRVQAPSSVVAWNCNCSDCSMRGNTHFIVPSEKFDLLGDSKE 60

Query: 401 FLTAYTFGTHKAKHTFCKVCGITSFYLPRSNPDGIAVTLACVDSGTLSHVEIKCFDGRNW 222
           FLT YTFGTH AKHTFCK CGITSFY+PRSNPDG+AVT  CVD GTL+HVEIK +DGRNW
Sbjct: 61  FLTTYTFGTHTAKHTFCKFCGITSFYIPRSNPDGVAVTFRCVDPGTLTHVEIKHYDGRNW 120

Query: 221 ERSYEHSSIASLSK 180
           E SY  + IAS S+
Sbjct: 121 ESSYNQTGIASCSQ 134


>ref|XP_003538389.1| PREDICTED: centromere protein V-like [Glycine max]
          Length = 137

 Score =  210 bits (535), Expect = 3e-52
 Identities = 91/136 (66%), Positives = 108/136 (79%)
 Frame = -1

Query: 581 MDFERISHSGGCHCGKVRWEVLAPESVVAWKCNCSDCSMRGNIHFIVPSTCFKLAESSNK 402
           MD E++ H+GGCHC  VRW+V+AP SVVAW CNCS C MR N HFIVP+  F+L   S K
Sbjct: 1   MDVEKVVHTGGCHCKSVRWKVVAPSSVVAWDCNCSTCYMRANTHFIVPANNFELLGDSEK 60

Query: 401 FLTAYTFGTHKAKHTFCKVCGITSFYLPRSNPDGIAVTLACVDSGTLSHVEIKCFDGRNW 222
           FLT YTFGTH AKHTFCK+CGITSFY PRSNPDG+AVT  CVD GTL+HVEI+ FDG+NW
Sbjct: 61  FLTTYTFGTHTAKHTFCKICGITSFYCPRSNPDGVAVTFRCVDPGTLTHVEIRYFDGKNW 120

Query: 221 ERSYEHSSIASLSKLE 174
           + +Y  + I+S SK+E
Sbjct: 121 DSAYTQTGISSYSKVE 136


>emb|CBI34157.3| unnamed protein product [Vitis vinifera]
          Length = 201

 Score =  208 bits (530), Expect = 1e-51
 Identities = 92/139 (66%), Positives = 112/139 (80%)
 Frame = -1

Query: 590 SCGMDFERISHSGGCHCGKVRWEVLAPESVVAWKCNCSDCSMRGNIHFIVPSTCFKLAES 411
           S  MD +++ HSGGCHC +VRW+V AP SV+ WKC+CS+C MRGN HFIVP+  F+L   
Sbjct: 58  SSEMDSKKVVHSGGCHCRRVRWKVEAPASVLVWKCDCSNCFMRGNAHFIVPAEKFELLGD 117

Query: 410 SNKFLTAYTFGTHKAKHTFCKVCGITSFYLPRSNPDGIAVTLACVDSGTLSHVEIKCFDG 231
           S +FLT YTFGTH AKHTFCK+CGITSFY+PRSN DG+AV+  CVD GTL+HVEIK FDG
Sbjct: 118 SKEFLTTYTFGTHTAKHTFCKICGITSFYIPRSNQDGVAVSFMCVDPGTLTHVEIKNFDG 177

Query: 230 RNWERSYEHSSIASLSKLE 174
           +NWE SY  S+IAS SK++
Sbjct: 178 KNWENSYIESNIASCSKVQ 196


>ref|XP_002279711.1| PREDICTED: centromere protein V-like [Vitis vinifera]
          Length = 141

 Score =  208 bits (529), Expect = 2e-51
 Identities = 91/136 (66%), Positives = 111/136 (81%)
 Frame = -1

Query: 581 MDFERISHSGGCHCGKVRWEVLAPESVVAWKCNCSDCSMRGNIHFIVPSTCFKLAESSNK 402
           MD +++ HSGGCHC +VRW+V AP SV+ WKC+CS+C MRGN HFIVP+  F+L   S +
Sbjct: 1   MDSKKVVHSGGCHCRRVRWKVEAPASVLVWKCDCSNCFMRGNAHFIVPAEKFELLGDSKE 60

Query: 401 FLTAYTFGTHKAKHTFCKVCGITSFYLPRSNPDGIAVTLACVDSGTLSHVEIKCFDGRNW 222
           FLT YTFGTH AKHTFCK+CGITSFY+PRSN DG+AV+  CVD GTL+HVEIK FDG+NW
Sbjct: 61  FLTTYTFGTHTAKHTFCKICGITSFYIPRSNQDGVAVSFMCVDPGTLTHVEIKNFDGKNW 120

Query: 221 ERSYEHSSIASLSKLE 174
           E SY  S+IAS SK++
Sbjct: 121 ENSYIESNIASCSKVQ 136


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