BLASTX nr result
ID: Coptis23_contig00010507
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00010507 (588 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004144225.1| PREDICTED: uncharacterized protein LOC101213... 76 5e-12 ref|XP_002285918.1| PREDICTED: uncharacterized protein LOC100248... 73 3e-11 gb|ABO71663.1| unknown [Brassica juncea] 71 1e-10 ref|NP_173470.1| uncharacterized protein [Arabidopsis thaliana] ... 71 2e-10 ref|XP_002890389.1| hypothetical protein ARALYDRAFT_889497 [Arab... 71 2e-10 >ref|XP_004144225.1| PREDICTED: uncharacterized protein LOC101213289 [Cucumis sativus] gi|449533749|ref|XP_004173834.1| PREDICTED: uncharacterized protein LOC101223985 isoform 1 [Cucumis sativus] Length = 150 Score = 75.9 bits (185), Expect = 5e-12 Identities = 44/87 (50%), Positives = 49/87 (56%) Frame = -2 Query: 551 RRIEGREKEERMITRSNLAEQLREYQIRSKNEWAXXXXXXXXXXXXXXXXXXXXXXXXXX 372 ++ R MITRSNL EQLREYQIRSK+EWA Sbjct: 34 KKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFV---- 89 Query: 371 XVIWELIILAFLVFSAISLYFSHMQLA 291 IWELIIL+FLVFSA+SLYF HMQLA Sbjct: 90 --IWELIILSFLVFSAVSLYFRHMQLA 114 >ref|XP_002285918.1| PREDICTED: uncharacterized protein LOC100248789 [Vitis vinifera] gi|302141681|emb|CBI18884.3| unnamed protein product [Vitis vinifera] Length = 106 Score = 73.2 bits (178), Expect = 3e-11 Identities = 42/76 (55%), Positives = 48/76 (63%) Frame = -2 Query: 518 MITRSNLAEQLREYQIRSKNEWAXXXXXXXXXXXXXXXXXXXXXXXXXXXVIWELIILAF 339 MITRSNLAEQLREYQIRSK++WA VIWEL+ILAF Sbjct: 1 MITRSNLAEQLREYQIRSKHDWA------SVSFFSSTSNLTSSRVDVVVFVIWELVILAF 54 Query: 338 LVFSAISLYFSHMQLA 291 LVFSA+SLYF H++LA Sbjct: 55 LVFSAVSLYFRHIRLA 70 >gb|ABO71663.1| unknown [Brassica juncea] Length = 106 Score = 71.2 bits (173), Expect = 1e-10 Identities = 41/76 (53%), Positives = 47/76 (61%) Frame = -2 Query: 518 MITRSNLAEQLREYQIRSKNEWAXXXXXXXXXXXXXXXXXXXXXXXXXXXVIWELIILAF 339 MITRSNLAEQLREYQIRSK++WA VIWEL+ILAF Sbjct: 1 MITRSNLAEQLREYQIRSKHDWA------SVSFFSSTSNFSSSRVDVVVFVIWELVILAF 54 Query: 338 LVFSAISLYFSHMQLA 291 LVFSA+SLYF ++LA Sbjct: 55 LVFSAVSLYFKRLELA 70 >ref|NP_173470.1| uncharacterized protein [Arabidopsis thaliana] gi|22655238|gb|AAM98209.1| unknown protein [Arabidopsis thaliana] gi|25084019|gb|AAN72156.1| unknown protein [Arabidopsis thaliana] gi|332191854|gb|AEE29975.1| uncharacterized protein [Arabidopsis thaliana] Length = 106 Score = 70.9 bits (172), Expect = 2e-10 Identities = 41/76 (53%), Positives = 46/76 (60%) Frame = -2 Query: 518 MITRSNLAEQLREYQIRSKNEWAXXXXXXXXXXXXXXXXXXXXXXXXXXXVIWELIILAF 339 MITRSNLAEQLREYQIRSK++WA VIWEL+ILAF Sbjct: 1 MITRSNLAEQLREYQIRSKHDWA------SVSFFSSTSNFSSSRVDVVVFVIWELVILAF 54 Query: 338 LVFSAISLYFSHMQLA 291 VFSA+SLYF +QLA Sbjct: 55 FVFSAVSLYFKRLQLA 70 >ref|XP_002890389.1| hypothetical protein ARALYDRAFT_889497 [Arabidopsis lyrata subsp. lyrata] gi|297336231|gb|EFH66648.1| hypothetical protein ARALYDRAFT_889497 [Arabidopsis lyrata subsp. lyrata] Length = 107 Score = 70.9 bits (172), Expect = 2e-10 Identities = 41/76 (53%), Positives = 46/76 (60%) Frame = -2 Query: 518 MITRSNLAEQLREYQIRSKNEWAXXXXXXXXXXXXXXXXXXXXXXXXXXXVIWELIILAF 339 MITRSNLAEQLREYQIRSK++WA VIWEL+ILAF Sbjct: 1 MITRSNLAEQLREYQIRSKHDWA-----SVSFFSSTSSFSSSSRVDVVVFVIWELVILAF 55 Query: 338 LVFSAISLYFSHMQLA 291 VFSA+SLYF +QLA Sbjct: 56 FVFSAVSLYFKRLQLA 71