BLASTX nr result

ID: Coptis23_contig00010507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010507
         (588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144225.1| PREDICTED: uncharacterized protein LOC101213...    76   5e-12
ref|XP_002285918.1| PREDICTED: uncharacterized protein LOC100248...    73   3e-11
gb|ABO71663.1| unknown [Brassica juncea]                               71   1e-10
ref|NP_173470.1| uncharacterized protein [Arabidopsis thaliana] ...    71   2e-10
ref|XP_002890389.1| hypothetical protein ARALYDRAFT_889497 [Arab...    71   2e-10

>ref|XP_004144225.1| PREDICTED: uncharacterized protein LOC101213289 [Cucumis sativus]
           gi|449533749|ref|XP_004173834.1| PREDICTED:
           uncharacterized protein LOC101223985 isoform 1 [Cucumis
           sativus]
          Length = 150

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 44/87 (50%), Positives = 49/87 (56%)
 Frame = -2

Query: 551 RRIEGREKEERMITRSNLAEQLREYQIRSKNEWAXXXXXXXXXXXXXXXXXXXXXXXXXX 372
           ++   R     MITRSNL EQLREYQIRSK+EWA                          
Sbjct: 34  KKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFV---- 89

Query: 371 XVIWELIILAFLVFSAISLYFSHMQLA 291
             IWELIIL+FLVFSA+SLYF HMQLA
Sbjct: 90  --IWELIILSFLVFSAVSLYFRHMQLA 114


>ref|XP_002285918.1| PREDICTED: uncharacterized protein LOC100248789 [Vitis vinifera]
           gi|302141681|emb|CBI18884.3| unnamed protein product
           [Vitis vinifera]
          Length = 106

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 42/76 (55%), Positives = 48/76 (63%)
 Frame = -2

Query: 518 MITRSNLAEQLREYQIRSKNEWAXXXXXXXXXXXXXXXXXXXXXXXXXXXVIWELIILAF 339
           MITRSNLAEQLREYQIRSK++WA                           VIWEL+ILAF
Sbjct: 1   MITRSNLAEQLREYQIRSKHDWA------SVSFFSSTSNLTSSRVDVVVFVIWELVILAF 54

Query: 338 LVFSAISLYFSHMQLA 291
           LVFSA+SLYF H++LA
Sbjct: 55  LVFSAVSLYFRHIRLA 70


>gb|ABO71663.1| unknown [Brassica juncea]
          Length = 106

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 41/76 (53%), Positives = 47/76 (61%)
 Frame = -2

Query: 518 MITRSNLAEQLREYQIRSKNEWAXXXXXXXXXXXXXXXXXXXXXXXXXXXVIWELIILAF 339
           MITRSNLAEQLREYQIRSK++WA                           VIWEL+ILAF
Sbjct: 1   MITRSNLAEQLREYQIRSKHDWA------SVSFFSSTSNFSSSRVDVVVFVIWELVILAF 54

Query: 338 LVFSAISLYFSHMQLA 291
           LVFSA+SLYF  ++LA
Sbjct: 55  LVFSAVSLYFKRLELA 70


>ref|NP_173470.1| uncharacterized protein [Arabidopsis thaliana]
           gi|22655238|gb|AAM98209.1| unknown protein [Arabidopsis
           thaliana] gi|25084019|gb|AAN72156.1| unknown protein
           [Arabidopsis thaliana] gi|332191854|gb|AEE29975.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 106

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 41/76 (53%), Positives = 46/76 (60%)
 Frame = -2

Query: 518 MITRSNLAEQLREYQIRSKNEWAXXXXXXXXXXXXXXXXXXXXXXXXXXXVIWELIILAF 339
           MITRSNLAEQLREYQIRSK++WA                           VIWEL+ILAF
Sbjct: 1   MITRSNLAEQLREYQIRSKHDWA------SVSFFSSTSNFSSSRVDVVVFVIWELVILAF 54

Query: 338 LVFSAISLYFSHMQLA 291
            VFSA+SLYF  +QLA
Sbjct: 55  FVFSAVSLYFKRLQLA 70


>ref|XP_002890389.1| hypothetical protein ARALYDRAFT_889497 [Arabidopsis lyrata subsp.
           lyrata] gi|297336231|gb|EFH66648.1| hypothetical protein
           ARALYDRAFT_889497 [Arabidopsis lyrata subsp. lyrata]
          Length = 107

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 41/76 (53%), Positives = 46/76 (60%)
 Frame = -2

Query: 518 MITRSNLAEQLREYQIRSKNEWAXXXXXXXXXXXXXXXXXXXXXXXXXXXVIWELIILAF 339
           MITRSNLAEQLREYQIRSK++WA                           VIWEL+ILAF
Sbjct: 1   MITRSNLAEQLREYQIRSKHDWA-----SVSFFSSTSSFSSSSRVDVVVFVIWELVILAF 55

Query: 338 LVFSAISLYFSHMQLA 291
            VFSA+SLYF  +QLA
Sbjct: 56  FVFSAVSLYFKRLQLA 71


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