BLASTX nr result

ID: Coptis23_contig00010502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010502
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002451737.1| hypothetical protein SORBIDRAFT_04g006940 [S...   123   1e-26
gb|AFW70679.1| DNA methyltransferase 1-associated protein 1, par...   121   5e-26
ref|XP_003567993.1| PREDICTED: DNA methyltransferase 1-associate...   121   5e-26
ref|XP_002278881.1| PREDICTED: SWR1-complex protein 4 [Vitis vin...   121   5e-26
ref|NP_001150819.1| DNA methyltransferase 1-associated protein 1...   121   5e-26

>ref|XP_002451737.1| hypothetical protein SORBIDRAFT_04g006940 [Sorghum bicolor]
           gi|241931568|gb|EES04713.1| hypothetical protein
           SORBIDRAFT_04g006940 [Sorghum bicolor]
          Length = 440

 Score =  123 bits (309), Expect = 1e-26
 Identities = 60/80 (75%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
 Frame = -1

Query: 235 AKDILGLPKISFSASQEKKSRPQKDSQRKPDGISREVYALTG--GFAPLMPSIDPLHLKR 62
           AKDILGLPK  FS+SQEKKSRP K+ QRKPDG+SREVYALTG  G APLMP+I+  HLKR
Sbjct: 3   AKDILGLPKTPFSSSQEKKSRPPKEPQRKPDGVSREVYALTGGVGMAPLMPTIEASHLKR 62

Query: 61  KALLEKEKITWQWLPFTSSA 2
           +   EKEK+ WQWLPFTSSA
Sbjct: 63  RPAAEKEKVAWQWLPFTSSA 82


>gb|AFW70679.1| DNA methyltransferase 1-associated protein 1, partial [Zea mays]
          Length = 155

 Score =  121 bits (304), Expect = 5e-26
 Identities = 59/80 (73%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
 Frame = -1

Query: 235 AKDILGLPKISFSASQEKKSRPQKDSQRKPDGISREVYALTG--GFAPLMPSIDPLHLKR 62
           AKDILGLPK  FS+SQEKKSRP K+ QRKPDG+SREVYALTG  G  PLMP+I+  HLKR
Sbjct: 3   AKDILGLPKTPFSSSQEKKSRPPKEPQRKPDGVSREVYALTGGVGMPPLMPTIEASHLKR 62

Query: 61  KALLEKEKITWQWLPFTSSA 2
           +   EKEK+ WQWLPFTSSA
Sbjct: 63  RPAAEKEKVAWQWLPFTSSA 82


>ref|XP_003567993.1| PREDICTED: DNA methyltransferase 1-associated protein 1-like
           [Brachypodium distachyon]
          Length = 440

 Score =  121 bits (304), Expect = 5e-26
 Identities = 59/80 (73%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
 Frame = -1

Query: 235 AKDILGLPKISFSASQEKKSRPQKDSQRKPDGISREVYALTG--GFAPLMPSIDPLHLKR 62
           AKDILGLPK  F +SQEKK RP K+ QRKPDG+SREVYALTG  G APLMP+I+  HLKR
Sbjct: 3   AKDILGLPKTPFQSSQEKKQRPPKEPQRKPDGVSREVYALTGGVGMAPLMPTIEASHLKR 62

Query: 61  KALLEKEKITWQWLPFTSSA 2
           +  +EKEKI WQWLPFTSSA
Sbjct: 63  RPAVEKEKIAWQWLPFTSSA 82


>ref|XP_002278881.1| PREDICTED: SWR1-complex protein 4 [Vitis vinifera]
           gi|297744019|emb|CBI36989.3| unnamed protein product
           [Vitis vinifera]
          Length = 445

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/78 (76%), Positives = 66/78 (84%)
 Frame = -1

Query: 235 AKDILGLPKISFSASQEKKSRPQKDSQRKPDGISREVYALTGGFAPLMPSIDPLHLKRKA 56
           AKDILGLPK   +A QEKKSRPQKDSQRKPDGISREVYALTGG APLMP++D   LKR+ 
Sbjct: 3   AKDILGLPKTPLTAPQEKKSRPQKDSQRKPDGISREVYALTGGLAPLMPAVDVSQLKRRP 62

Query: 55  LLEKEKITWQWLPFTSSA 2
             + EK+TWQWLPFTSSA
Sbjct: 63  QSD-EKVTWQWLPFTSSA 79


>ref|NP_001150819.1| DNA methyltransferase 1-associated protein 1 [Zea mays]
           gi|195642178|gb|ACG40557.1| DNA methyltransferase
           1-associated protein 1 [Zea mays]
          Length = 440

 Score =  121 bits (304), Expect = 5e-26
 Identities = 59/80 (73%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
 Frame = -1

Query: 235 AKDILGLPKISFSASQEKKSRPQKDSQRKPDGISREVYALTG--GFAPLMPSIDPLHLKR 62
           AKDILGLPK  FS+SQEKKSRP K+ QRKPDG+SREVYALTG  G  PLMP+I+  HLKR
Sbjct: 3   AKDILGLPKTPFSSSQEKKSRPPKEPQRKPDGVSREVYALTGGVGMPPLMPTIEASHLKR 62

Query: 61  KALLEKEKITWQWLPFTSSA 2
           +   EKEK+ WQWLPFTSSA
Sbjct: 63  RPAAEKEKVAWQWLPFTSSA 82


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