BLASTX nr result

ID: Coptis23_contig00010501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010501
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274005.1| PREDICTED: uncharacterized protein LOC100264...   159   6e-37
ref|XP_004152139.1| PREDICTED: uncharacterized protein LOC101220...   138   1e-30
ref|XP_002880053.1| hypothetical protein ARALYDRAFT_483465 [Arab...   132   6e-29
ref|XP_002310418.1| predicted protein [Populus trichocarpa] gi|2...   130   2e-28
ref|NP_566001.1| uncharacterized protein [Arabidopsis thaliana] ...   127   2e-27

>ref|XP_002274005.1| PREDICTED: uncharacterized protein LOC100264616 [Vitis vinifera]
           gi|147788706|emb|CAN65294.1| hypothetical protein
           VITISV_017781 [Vitis vinifera]
          Length = 167

 Score =  159 bits (401), Expect = 6e-37
 Identities = 79/167 (47%), Positives = 106/167 (63%)
 Frame = +2

Query: 53  MGLSASKRVSKSLQDSPQFTTTCNSVYENCLNLTQHAFPGIRPYXXXXXXXXXXXXXXXX 232
           MGLSASKRV  SLQ+SP+F + C+SVY  CL+L++HAF G+RPY                
Sbjct: 1   MGLSASKRVKSSLQNSPKFDSVCDSVYSECLDLSEHAFAGVRPYQLSGASLRLHQSLCDH 60

Query: 233 XXXIKKWVPSPPNQNQVDTALSTITKNSPDQNIETLNQTIFKEFAVEVFKDVIVYNAGKA 412
              IK+WVPSPP Q QVD AL  +T++      +TL +  FK F VE+F D +V  AG+A
Sbjct: 61  HPLIKRWVPSPPTQLQVDRALRVVTRSGDSVQDQTLGRVEFKAFEVELFADAVVAGAGQA 120

Query: 413 VVERVPFXXXXXXXXXXLAKSGKEVVGSVMGVYALGVATAIYVSLSG 553
           ++ RVP           +A+SGKE+V + +GVYALGVAT++Y+ LSG
Sbjct: 121 LLRRVPIGVAGIAGVGLVARSGKELVATAIGVYALGVATSVYLGLSG 167


>ref|XP_004152139.1| PREDICTED: uncharacterized protein LOC101220555 [Cucumis sativus]
           gi|449484752|ref|XP_004156970.1| PREDICTED:
           uncharacterized protein LOC101227331 [Cucumis sativus]
          Length = 169

 Score =  138 bits (347), Expect = 1e-30
 Identities = 71/169 (42%), Positives = 101/169 (59%), Gaps = 2/169 (1%)
 Frame = +2

Query: 53  MGLSASKRVSKSLQDSPQFTTTCNSVYENCLNLTQHAFPGIRPYXXXXXXXXXXXXXXXX 232
           MG+SASKRV  SL +S +F + CNS + +CL LTQHA+ G+ PY                
Sbjct: 1   MGISASKRVRNSLTNSHEFDSACNSTFSHCLALTQHAYNGVFPYQLCTAADHLHHLLTVV 60

Query: 233 XXX--IKKWVPSPPNQNQVDTALSTITKNSPDQNIETLNQTIFKEFAVEVFKDVIVYNAG 406
                I  W+PSPP + QVD+AL  + ++  D+  E L   +F  +A+E+F + +V N G
Sbjct: 61  QPHPLITNWLPSPPTRLQVDSALRAVNRDDSDREDEALGLILFNRWAIELFAEAVVKNVG 120

Query: 407 KAVVERVPFXXXXXXXXXXLAKSGKEVVGSVMGVYALGVATAIYVSLSG 553
           K V+ RVP           + +SGK+VVG+V+ VYALGVAT++Y+SLSG
Sbjct: 121 KKVMVRVPVGIAGIAGIGAVTRSGKDVVGTVVAVYALGVATSVYLSLSG 169


>ref|XP_002880053.1| hypothetical protein ARALYDRAFT_483465 [Arabidopsis lyrata subsp.
           lyrata] gi|297325892|gb|EFH56312.1| hypothetical protein
           ARALYDRAFT_483465 [Arabidopsis lyrata subsp. lyrata]
          Length = 169

 Score =  132 bits (332), Expect = 6e-29
 Identities = 68/168 (40%), Positives = 103/168 (61%), Gaps = 2/168 (1%)
 Frame = +2

Query: 53  MGLSASKRVSKSLQDSPQFTTTCNSVYENCLNLTQHAFPGIRPYXXXXXXXXXXXXXXXX 232
           MG+S SKRV+  L +SP+F + C+S YE  L+L QHAF G+RPY                
Sbjct: 1   MGISGSKRVTTILSNSPEFNSACDSAYEESLSLAQHAFAGVRPYQLVSAAAHIHRNLSSL 60

Query: 233 XXX-IKKWVPSPPNQNQVDTALS-TITKNSPDQNIETLNQTIFKEFAVEVFKDVIVYNAG 406
               I +WVPSPP+Q+QVD+AL  T+++ +  +  E L    FKE+AVEVF + +V NA 
Sbjct: 61  GFSLITRWVPSPPSQSQVDSALRVTVSRVAAAEEEEILGPEEFKEWAVEVFAEAVVGNAR 120

Query: 407 KAVVERVPFXXXXXXXXXXLAKSGKEVVGSVMGVYALGVATAIYVSLS 550
           K +  ++P           + +SG+ ++G+ +GVYA+GVAT++++SLS
Sbjct: 121 KTIASQIPLGIVGIAGIGAVTRSGQNLIGAAIGVYAIGVATSVFLSLS 168


>ref|XP_002310418.1| predicted protein [Populus trichocarpa] gi|222853321|gb|EEE90868.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score =  130 bits (328), Expect = 2e-28
 Identities = 72/175 (41%), Positives = 98/175 (56%), Gaps = 8/175 (4%)
 Frame = +2

Query: 53  MGLSASKRVSKSLQDSPQFTTTCNSVYENCLNLTQHAFPGIRPYXXXXXXXXXXXXXXXX 232
           MG+SASKRV  +L +S +F   C+S + +CL+LTQHAF GI PY                
Sbjct: 1   MGISASKRVKTTLSNSQEFNLACDSTFTHCLSLTQHAFQGILPYQLPTATTYLHTTLTTT 60

Query: 233 XXX---IKKWVPSPPNQNQVDTALSTITKNSPDQNIETLNQTI-----FKEFAVEVFKDV 388
                 I KWVPSPP + Q+D AL  +    P    E   + I     F+E+A+ +F + 
Sbjct: 61  AAAAPLILKWVPSPPTRGQIDWALRMVANRKPGAAQEEKGELILEHAKFREWALVLFTEA 120

Query: 389 IVYNAGKAVVERVPFXXXXXXXXXXLAKSGKEVVGSVMGVYALGVATAIYVSLSG 553
            V NAGKA++ R+P           + K GKEVVG+ +GVYALGV T++Y+SLSG
Sbjct: 121 AVGNAGKAILGRLPLGVAGIVGVGAVVKGGKEVVGAAIGVYALGVVTSVYLSLSG 175


>ref|NP_566001.1| uncharacterized protein [Arabidopsis thaliana]
           gi|2288994|gb|AAB64323.1| expressed protein [Arabidopsis
           thaliana] gi|21555198|gb|AAM63802.1| unknown
           [Arabidopsis thaliana] gi|194708808|gb|ACF88488.1|
           At2g43540 [Arabidopsis thaliana]
           gi|330255194|gb|AEC10288.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 169

 Score =  127 bits (318), Expect = 2e-27
 Identities = 65/168 (38%), Positives = 102/168 (60%), Gaps = 2/168 (1%)
 Frame = +2

Query: 53  MGLSASKRVSKSLQDSPQFTTTCNSVYENCLNLTQHAFPGIRPYXXXXXXXXXXXXXXXX 232
           MG+S SKRV+  L +SP+F + C+S Y+  L+L QHAF G+RPY                
Sbjct: 1   MGISGSKRVTTILSNSPEFDSACDSAYDESLSLAQHAFAGVRPYQLVSAAAHIHRNLSAL 60

Query: 233 XXX-IKKWVPSPPNQNQVDTALS-TITKNSPDQNIETLNQTIFKEFAVEVFKDVIVYNAG 406
               I +W+ SPP+Q+QVD+AL  T+++ +     E L Q  FK++AVEVF + +V NA 
Sbjct: 61  RFPLITRWLSSPPSQSQVDSALRVTVSRVTAADEEEILGQEEFKKWAVEVFAEAVVGNAR 120

Query: 407 KAVVERVPFXXXXXXXXXXLAKSGKEVVGSVMGVYALGVATAIYVSLS 550
           K +  R+P           + +SG+ ++G+ +GVYA+GVAT++++SL+
Sbjct: 121 KTIASRIPLGIVGIGGIGAVTRSGQNLIGAAIGVYAIGVATSVFLSLT 168


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