BLASTX nr result

ID: Coptis23_contig00010494 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010494
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535127.1| PREDICTED: uncharacterized protein LOC100796...    84   2e-14
ref|XP_003518061.1| PREDICTED: uncharacterized protein LOC100797...    78   1e-12
ref|XP_002527421.1| conserved hypothetical protein [Ricinus comm...    70   4e-10
ref|XP_002308367.1| predicted protein [Populus trichocarpa] gi|2...    69   9e-10
ref|XP_002322670.1| predicted protein [Populus trichocarpa] gi|2...    66   4e-09

>ref|XP_003535127.1| PREDICTED: uncharacterized protein LOC100796667 [Glycine max]
          Length = 330

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 52/133 (39%), Positives = 71/133 (53%), Gaps = 4/133 (3%)
 Frame = +2

Query: 2   SFSKIPFLVMNKLSIEHXXXXXXXXXXXXXXXXXVEV----EVEEACLGVKRQLDVLHAE 169
           +F KIPFLVM+K+ +EH                   V    +V EAC  VKRQ++VL AE
Sbjct: 202 AFQKIPFLVMDKIGVEHMMECGDSKKGKGDAGEKPRVPASADVAEACFAVKRQMEVLQAE 261

Query: 170 NGLLRRAVDELRSEIGVGKLGLLAGNVXXXXXXXXXXXXXXXXXXPDFSGFPGKVTDEDA 349
           NGLLR AV++LR EI  G+ G   G++                   D+  FPGK T+ +A
Sbjct: 262 NGLLRNAVEDLRREIVGGRSG---GSI-----LGKNPKKNERKTTSDYGNFPGKSTEAEA 313

Query: 350 NEDVKKGLMSSAG 388
           +E++KK LM +AG
Sbjct: 314 SEELKKALMGAAG 326


>ref|XP_003518061.1| PREDICTED: uncharacterized protein LOC100797011 [Glycine max]
          Length = 336

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 50/132 (37%), Positives = 66/132 (50%), Gaps = 4/132 (3%)
 Frame = +2

Query: 2   SFSKIPFLVMNKLSIEHXXXXXXXXXXXXXXXXX---VEVEVEEACLGVKRQLDVLHAEN 172
           +F KIPFLVM+K+ +EH                       +V EAC  VKRQ++VL AEN
Sbjct: 208 AFQKIPFLVMDKIGVEHMMECGVSKEKVSAGEKSRVPASADVAEACFAVKRQMEVLQAEN 267

Query: 173 GLLRRAVDELRSEI-GVGKLGLLAGNVXXXXXXXXXXXXXXXXXXPDFSGFPGKVTDEDA 349
           GLLR AV++LR EI GV     + G                     D+  FPGK T+ +A
Sbjct: 268 GLLRNAVEDLRREIVGVRTSSSVMGK-------SPNLRKNEKKTTSDYGNFPGKSTEAEA 320

Query: 350 NEDVKKGLMSSA 385
           +E +KK LM +A
Sbjct: 321 SEKLKKALMGAA 332


>ref|XP_002527421.1| conserved hypothetical protein [Ricinus communis]
           gi|223533231|gb|EEF34987.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 361

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 46/140 (32%), Positives = 63/140 (45%), Gaps = 11/140 (7%)
 Frame = +2

Query: 2   SFSKIPFLVMNKLSIEHXXXXXXXXXXXXXXXXXV---------EVEVEEACLGVKRQLD 154
           +F  IPFLVMNK+ IEH                            V++ EACL VK+Q++
Sbjct: 218 NFRNIPFLVMNKIGIEHVDSCDDSKSKGKVMTPLNVTKLGSELRNVDMAEACLSVKKQME 277

Query: 155 VLHAENGLLRRAVDELRSEIGVGKLG--LLAGNVXXXXXXXXXXXXXXXXXXPDFSGFPG 328
           VL AENGLL++AVD+LR EI  G+L   +   N                    +      
Sbjct: 278 VLQAENGLLKKAVDDLRQEISSGRLSFPVADSNAGRHRDIERNAIKNGGGSRVERRSNEK 337

Query: 329 KVTDEDANEDVKKGLMSSAG 388
           K  + D NE++KK L  + G
Sbjct: 338 KAVESDVNEELKKALKGNVG 357


>ref|XP_002308367.1| predicted protein [Populus trichocarpa] gi|222854343|gb|EEE91890.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
 Frame = +2

Query: 2   SFSKIPFLVMNKLSIEHXXXXXXXXXXXXXXXXX-VEV---EVEEACLGVKRQLDVLHAE 169
           +F KIPFLVMNK+ IEH                  +E+   +V EACLGVKRQL++L +E
Sbjct: 232 NFRKIPFLVMNKVGIEHVDDGDGRSKKEGTTGKVGMELGNSDVAEACLGVKRQLEILQSE 291

Query: 170 NGLLRRAVDELRSEIGVGKL 229
           NG L++AV+ LR EIG GKL
Sbjct: 292 NGHLKKAVEGLREEIGGGKL 311


>ref|XP_002322670.1| predicted protein [Populus trichocarpa] gi|222867300|gb|EEF04431.1|
           predicted protein [Populus trichocarpa]
          Length = 325

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 39/80 (48%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
 Frame = +2

Query: 2   SFSKIPFLVMNKLSIEHXXXXXXXXXXXXXXXXXV----EVEVEEACLGVKRQLDVLHAE 169
           +F  IP  VMNK+ IEH                        EV EACLGVKRQL+VL +E
Sbjct: 227 NFRTIPVFVMNKIGIEHVDGRDERSKKEGTTGKVEMDSGNAEVAEACLGVKRQLEVLQSE 286

Query: 170 NGLLRRAVDELRSEIGVGKL 229
           NG LR+AV+EL  EIG GKL
Sbjct: 287 NGHLRKAVEELSEEIGGGKL 306


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