BLASTX nr result

ID: Coptis23_contig00010488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010488
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318348.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_002318349.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24
ref|XP_002269313.1| PREDICTED: plastid division protein CDP1, ch...   112   2e-23
ref|XP_002514511.1| conserved hypothetical protein [Ricinus comm...   110   2e-22
ref|XP_002329683.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22

>ref|XP_002318348.1| predicted protein [Populus trichocarpa] gi|222859021|gb|EEE96568.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score =  115 bits (288), Expect = 4e-24
 Identities = 53/65 (81%), Positives = 59/65 (90%)
 Frame = -1

Query: 288 AGNVREKVPPKSSLRIPWSWVPAALCLLQEAGEENLVLEIGRAALQHPDANPFTHDCLLS 109
           AGNVREK+PPKSSLRIPW+W+  ALCLLQE GEE LVL+IGRAALQHPDA P++HD LLS
Sbjct: 89  AGNVREKIPPKSSLRIPWAWLSGALCLLQEVGEEKLVLDIGRAALQHPDAKPYSHDVLLS 148

Query: 108 MALAE 94
           MALAE
Sbjct: 149 MALAE 153


>ref|XP_002318349.1| predicted protein [Populus trichocarpa] gi|222859022|gb|EEE96569.1|
           predicted protein [Populus trichocarpa]
          Length = 886

 Score =  114 bits (285), Expect = 8e-24
 Identities = 52/65 (80%), Positives = 59/65 (90%)
 Frame = -1

Query: 288 AGNVREKVPPKSSLRIPWSWVPAALCLLQEAGEENLVLEIGRAALQHPDANPFTHDCLLS 109
           AGNVREK+PPKS+LRIPW+W+  ALCLLQE GEE LVL+IGRAALQHPDA P++HD LLS
Sbjct: 165 AGNVREKIPPKSTLRIPWAWLSGALCLLQEVGEEKLVLDIGRAALQHPDAKPYSHDVLLS 224

Query: 108 MALAE 94
           MALAE
Sbjct: 225 MALAE 229


>ref|XP_002269313.1| PREDICTED: plastid division protein CDP1, chloroplastic [Vitis
           vinifera] gi|296087989|emb|CBI35272.3| unnamed protein
           product [Vitis vinifera]
          Length = 822

 Score =  112 bits (281), Expect = 2e-23
 Identities = 50/65 (76%), Positives = 58/65 (89%)
 Frame = -1

Query: 288 AGNVREKVPPKSSLRIPWSWVPAALCLLQEAGEENLVLEIGRAALQHPDANPFTHDCLLS 109
           AGNV+EK+PPKS+LRIPW+W+P ALCLLQE GEE LVL+IGR ALQHPDA P+ HD +LS
Sbjct: 154 AGNVKEKIPPKSALRIPWAWLPGALCLLQEVGEEKLVLDIGRRALQHPDAKPYIHDLILS 213

Query: 108 MALAE 94
           MALAE
Sbjct: 214 MALAE 218


>ref|XP_002514511.1| conserved hypothetical protein [Ricinus communis]
           gi|223546410|gb|EEF47911.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 788

 Score =  110 bits (274), Expect = 2e-22
 Identities = 50/65 (76%), Positives = 58/65 (89%)
 Frame = -1

Query: 288 AGNVREKVPPKSSLRIPWSWVPAALCLLQEAGEENLVLEIGRAALQHPDANPFTHDCLLS 109
           AGNVR+K+PPKSSLRIPW W+PAAL LLQEAGEE +VL+IG+ AL+HPD+ PF HD LLS
Sbjct: 144 AGNVRDKIPPKSSLRIPWPWLPAALSLLQEAGEEKIVLDIGKEALRHPDSKPFVHDILLS 203

Query: 108 MALAE 94
           MALAE
Sbjct: 204 MALAE 208


>ref|XP_002329683.1| predicted protein [Populus trichocarpa] gi|222870591|gb|EEF07722.1|
           predicted protein [Populus trichocarpa]
          Length = 742

 Score =  109 bits (272), Expect = 3e-22
 Identities = 50/65 (76%), Positives = 58/65 (89%)
 Frame = -1

Query: 288 AGNVREKVPPKSSLRIPWSWVPAALCLLQEAGEENLVLEIGRAALQHPDANPFTHDCLLS 109
           AGNVR+K+PPKSSLRIP +W+P ALCLLQE GE+ LVL+IG+AALQHPDA P+ HD LLS
Sbjct: 70  AGNVRDKIPPKSSLRIPLAWLPGALCLLQEVGEDKLVLDIGQAALQHPDAKPYVHDVLLS 129

Query: 108 MALAE 94
           MALAE
Sbjct: 130 MALAE 134


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