BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010487
         (686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis v...   281   1e-73
emb|CBI24130.3| unnamed protein product [Vitis vinifera]              281   1e-73
ref|XP_002312219.1| predicted protein [Populus trichocarpa] gi|2...   272   5e-71
ref|XP_002518821.1| Nucleoprotein TPR, putative [Ricinus communi...   264   1e-68
ref|NP_001185436.1| nucleoprotein TPR [Arabidopsis thaliana] gi|...   258   8e-67

>ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis vinifera]
          Length = 2087

 Score =  281 bits (718), Expect = 1e-73
 Identities = 137/214 (64%), Positives = 176/214 (82%)
 Frame = -3

Query: 645 MPLFITEEELERFSNNPTLISQKADAYIIQLHRQIETLKAQSDASSITSEQTCALLEQKY 466
           MPLFI++EE  R SN+  L+++KAD++I  L+ +++T+KAQ+DA+SIT+EQTC+LLEQKY
Sbjct: 1   MPLFISDEEYSRCSNDVALVAEKADSFIRDLYNELQTVKAQADAASITAEQTCSLLEQKY 60

Query: 465 ISLSSDFSILESQNSQLTLSIDHHLQDLAQLQSQKHQLHLNAISKDGEVERLSMEVTELH 286
           ISLS +FS LESQN+QL  S+   L +LAQ+Q++KHQLHL +I KDGE+ERLS E +ELH
Sbjct: 61  ISLSQEFSKLESQNAQLNSSLQERLSELAQIQAEKHQLHLKSIEKDGEIERLSTEESELH 120

Query: 285 KSKRQLLELVEQKDSEIREKNATIKTYLDKIVNVTDDSASKQAHLRDTESEMARSNATCA 106
           KSKRQLLE +E KD EI EKNATIK+YLDKIVN+TD +A ++A L D E+E++RS A CA
Sbjct: 121 KSKRQLLEFLEHKDLEISEKNATIKSYLDKIVNMTDTAALREARLSDAEAELSRSKAACA 180

Query: 105 RFLQEKELIQRHNLWLNEELTDKVSETIELRRRH 4
           R LQEKELI+RHN+WLN+ELT KV    ELRR H
Sbjct: 181 RLLQEKELIERHNVWLNDELTSKVKSLTELRRTH 214


>emb|CBI24130.3| unnamed protein product [Vitis vinifera]
          Length = 2088

 Score =  281 bits (718), Expect = 1e-73
 Identities = 137/214 (64%), Positives = 176/214 (82%)
 Frame = -3

Query: 645 MPLFITEEELERFSNNPTLISQKADAYIIQLHRQIETLKAQSDASSITSEQTCALLEQKY 466
           MPLFI++EE  R SN+  L+++KAD++I  L+ +++T+KAQ+DA+SIT+EQTC+LLEQKY
Sbjct: 1   MPLFISDEEYSRCSNDVALVAEKADSFIRDLYNELQTVKAQADAASITAEQTCSLLEQKY 60

Query: 465 ISLSSDFSILESQNSQLTLSIDHHLQDLAQLQSQKHQLHLNAISKDGEVERLSMEVTELH 286
           ISLS +FS LESQN+QL  S+   L +LAQ+Q++KHQLHL +I KDGE+ERLS E +ELH
Sbjct: 61  ISLSQEFSKLESQNAQLNSSLQERLSELAQIQAEKHQLHLKSIEKDGEIERLSTEESELH 120

Query: 285 KSKRQLLELVEQKDSEIREKNATIKTYLDKIVNVTDDSASKQAHLRDTESEMARSNATCA 106
           KSKRQLLE +E KD EI EKNATIK+YLDKIVN+TD +A ++A L D E+E++RS A CA
Sbjct: 121 KSKRQLLEFLEHKDLEISEKNATIKSYLDKIVNMTDTAALREARLSDAEAELSRSKAACA 180

Query: 105 RFLQEKELIQRHNLWLNEELTDKVSETIELRRRH 4
           R LQEKELI+RHN+WLN+ELT KV    ELRR H
Sbjct: 181 RLLQEKELIERHNVWLNDELTSKVKSLTELRRTH 214


>ref|XP_002312219.1| predicted protein [Populus trichocarpa] gi|222852039|gb|EEE89586.1|
           predicted protein [Populus trichocarpa]
          Length = 2052

 Score =  272 bits (695), Expect = 5e-71
 Identities = 133/215 (61%), Positives = 176/215 (81%)
 Frame = -3

Query: 645 MPLFITEEELERFSNNPTLISQKADAYIIQLHRQIETLKAQSDASSITSEQTCALLEQKY 466
           M +FIT+++L R SN+ + ++ KAD +I  L  ++E ++A +DA+SIT+EQTC+LLEQK+
Sbjct: 1   MHIFITDDDLARHSNDASYVAAKADEFIRGLQSELENVRAAADAASITAEQTCSLLEQKF 60

Query: 465 ISLSSDFSILESQNSQLTLSIDHHLQDLAQLQSQKHQLHLNAISKDGEVERLSMEVTELH 286
           ++LS++FS LESQN+QL  S+D  L +LAQ Q+QKHQLHL +I KDGE+ERL+MEV+ELH
Sbjct: 61  LALSTEFSKLESQNAQLQSSLDDRLSELAQAQAQKHQLHLQSIGKDGEIERLTMEVSELH 120

Query: 285 KSKRQLLELVEQKDSEIREKNATIKTYLDKIVNVTDDSASKQAHLRDTESEMARSNATCA 106
           KSKRQL+ELVEQKD EI EKNAT   YLDKIVN+TD +A+++A + + E+E+ARS ATC 
Sbjct: 121 KSKRQLIELVEQKDLEISEKNATFNGYLDKIVNLTDRAANREARISELEAELARSQATCT 180

Query: 105 RFLQEKELIQRHNLWLNEELTDKVSETIELRRRHA 1
           R LQEKELI+RHN WLN+ELT KV   +ELRRRHA
Sbjct: 181 RLLQEKELIERHNAWLNDELTAKVDTLMELRRRHA 215


>ref|XP_002518821.1| Nucleoprotein TPR, putative [Ricinus communis]
           gi|223541994|gb|EEF43539.1| Nucleoprotein TPR, putative
           [Ricinus communis]
          Length = 2095

 Score =  264 bits (675), Expect = 1e-68
 Identities = 133/215 (61%), Positives = 170/215 (79%)
 Frame = -3

Query: 645 MPLFITEEELERFSNNPTLISQKADAYIIQLHRQIETLKAQSDASSITSEQTCALLEQKY 466
           MPLFI+++EL R S + + ++ KAD YI  L    ET+KA +DA++IT+EQTC+LLEQK+
Sbjct: 1   MPLFISDDELARHSGDVSFVAAKADDYIKGLQADFETVKAAADAAAITAEQTCSLLEQKF 60

Query: 465 ISLSSDFSILESQNSQLTLSIDHHLQDLAQLQSQKHQLHLNAISKDGEVERLSMEVTELH 286
           +SLSS+FS LESQN+QL  S+D  L +LA++Q+QKHQLHL +I+KDGEVERL+MEV+E+H
Sbjct: 61  LSLSSEFSNLESQNAQLQTSLDDRLSELAEVQAQKHQLHLQSIAKDGEVERLTMEVSEVH 120

Query: 285 KSKRQLLELVEQKDSEIREKNATIKTYLDKIVNVTDDSASKQAHLRDTESEMARSNATCA 106
           KSKRQL+ELVE+KDSEI EKN  I  YLDKIV +TD +A K+  L + E+E+AR  A  A
Sbjct: 121 KSKRQLIELVERKDSEISEKNIIISGYLDKIVTLTDKAAQKETRLSEVEAELARERANSA 180

Query: 105 RFLQEKELIQRHNLWLNEELTDKVSETIELRRRHA 1
           R  QEKELI+RHN WLNEELT KV   I+LRR HA
Sbjct: 181 RLSQEKELIERHNAWLNEELTAKVDSLIKLRRTHA 215


>ref|NP_001185436.1| nucleoprotein TPR [Arabidopsis thaliana]
           gi|332198107|gb|AEE36228.1| nucleoprotein TPR
           [Arabidopsis thaliana]
          Length = 2115

 Score =  258 bits (659), Expect = 8e-67
 Identities = 127/216 (58%), Positives = 175/216 (81%), Gaps = 1/216 (0%)
 Frame = -3

Query: 645 MPLFITEEELERFSNNP-TLISQKADAYIIQLHRQIETLKAQSDASSITSEQTCALLEQK 469
           MPLF+ +EEL R S++  ++++++AD YI +++ ++++++A++DA+SIT+EQTC+LLEQK
Sbjct: 1   MPLFMPDEELARLSSDAASVVAERADEYIRKIYAELDSVRAKADAASITAEQTCSLLEQK 60

Query: 468 YISLSSDFSILESQNSQLTLSIDHHLQDLAQLQSQKHQLHLNAISKDGEVERLSMEVTEL 289
           Y+SLS DFS LESQN++L    D  L +LAQ Q+QKHQLHL +I KDGEVER+S E++EL
Sbjct: 61  YLSLSQDFSSLESQNAKLQSDFDDRLAELAQSQAQKHQLHLQSIEKDGEVERMSTEMSEL 120

Query: 288 HKSKRQLLELVEQKDSEIREKNATIKTYLDKIVNVTDDSASKQAHLRDTESEMARSNATC 109
           HKSKRQL+EL+EQKD+EI EKN+TIK+YLDKIV +TD S+ K+A L +  +E+ARS A C
Sbjct: 121 HKSKRQLMELLEQKDAEISEKNSTIKSYLDKIVKLTDTSSEKEARLAEATAELARSQAMC 180

Query: 108 ARFLQEKELIQRHNLWLNEELTDKVSETIELRRRHA 1
           +R  QEKEL +RH  WL+EELT KV    ELRRRH+
Sbjct: 181 SRLSQEKELTERHAKWLDEELTAKVDSYAELRRRHS 216