BLASTX nr result

ID: Coptis23_contig00010466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010466
         (949 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34723.3| unnamed protein product [Vitis vinifera]              195   2e-47
ref|XP_002276651.1| PREDICTED: uncharacterized protein LOC100254...   195   2e-47
emb|CAN75939.1| hypothetical protein VITISV_040960 [Vitis vinifera]   172   8e-41
ref|XP_002299555.1| predicted protein [Populus trichocarpa] gi|2...   168   2e-39
ref|XP_002509726.1| calmodulin binding protein, putative [Ricinu...   162   1e-37

>emb|CBI34723.3| unnamed protein product [Vitis vinifera]
          Length = 465

 Score =  195 bits (495), Expect = 2e-47
 Identities = 129/318 (40%), Positives = 165/318 (51%), Gaps = 28/318 (8%)
 Frame = -1

Query: 871 MGKTARWFRGLLGGSKKNSSFTCVSDSKPIKEK---KKWSFVKSFRDK------------ 737
           MGK ++WFRGLLG  K +S     + +    +K   ++WSFV+S+R+K            
Sbjct: 1   MGKASKWFRGLLGLKKTDSPAPTPAPAPARLDKSVKRRWSFVRSYREKDHTRHANDRRGA 60

Query: 736 ---QPEPPIPSVVNXXXXXXXXXXXXXSNAYFQGNDPNKHXXXXXXXXXXXXXXXXXXXX 566
              +P PP                    +AY  G DPNKH                    
Sbjct: 61  LYGEPHPP--------------------SAYADGVDPNKHAIAVAAATAAVAEAAVAAAQ 100

Query: 565 XXXXXVKLTSSGRCTTMDGI------RVDVWAAVKIQSAFRGYXXXXXXXXXXXXXXXXX 404
                V+LTSSGR               + WA +KIQS FRGY                 
Sbjct: 101 AAAAVVRLTSSGRSAAPSAYVSAGFSAREEWAVIKIQSLFRGYLARRALRALKALVKLQA 160

Query: 403 XVRGHIMRKKT---MRCMQALVRVQSRARVGRMHISETPHLNIKSSM-SQPGPATPEKYE 236
            VRGHI+RK+T   +R MQALVR Q+RAR GR  ISE+ H + KSS    PGPATPEK+E
Sbjct: 161 LVRGHIVRKQTADMLRRMQALVRAQARARAGRAQISESSHSSGKSSQFHHPGPATPEKFE 220

Query: 235 RTIRSNSTRHDRVSLLKRNSSKQNSRDILDWDRTHLSRNCLDRRMDERSRDYYKETLMMT 56
             IR+ + + D+ S+LKRNSSK + R+I+D D+THLSRN  DRR+DE S D    ++   
Sbjct: 221 HAIRAKNMKQDQSSILKRNSSKASGRNIIDQDKTHLSRNWSDRRLDEGSWDQQGSSI-RA 279

Query: 55  GPTEDEKSDKILEIDPGK 2
           GPT+DEKSDKILEID GK
Sbjct: 280 GPTDDEKSDKILEIDTGK 297


>ref|XP_002276651.1| PREDICTED: uncharacterized protein LOC100254717 [Vitis vinifera]
          Length = 494

 Score =  195 bits (495), Expect = 2e-47
 Identities = 129/318 (40%), Positives = 165/318 (51%), Gaps = 28/318 (8%)
 Frame = -1

Query: 871 MGKTARWFRGLLGGSKKNSSFTCVSDSKPIKEK---KKWSFVKSFRDK------------ 737
           MGK ++WFRGLLG  K +S     + +    +K   ++WSFV+S+R+K            
Sbjct: 1   MGKASKWFRGLLGLKKTDSPAPTPAPAPARLDKSVKRRWSFVRSYREKDHTRHANDRRGA 60

Query: 736 ---QPEPPIPSVVNXXXXXXXXXXXXXSNAYFQGNDPNKHXXXXXXXXXXXXXXXXXXXX 566
              +P PP                    +AY  G DPNKH                    
Sbjct: 61  LYGEPHPP--------------------SAYADGVDPNKHAIAVAAATAAVAEAAVAAAQ 100

Query: 565 XXXXXVKLTSSGRCTTMDGI------RVDVWAAVKIQSAFRGYXXXXXXXXXXXXXXXXX 404
                V+LTSSGR               + WA +KIQS FRGY                 
Sbjct: 101 AAAAVVRLTSSGRSAAPSAYVSAGFSAREEWAVIKIQSLFRGYLARRALRALKALVKLQA 160

Query: 403 XVRGHIMRKKT---MRCMQALVRVQSRARVGRMHISETPHLNIKSSM-SQPGPATPEKYE 236
            VRGHI+RK+T   +R MQALVR Q+RAR GR  ISE+ H + KSS    PGPATPEK+E
Sbjct: 161 LVRGHIVRKQTADMLRRMQALVRAQARARAGRAQISESSHSSGKSSQFHHPGPATPEKFE 220

Query: 235 RTIRSNSTRHDRVSLLKRNSSKQNSRDILDWDRTHLSRNCLDRRMDERSRDYYKETLMMT 56
             IR+ + + D+ S+LKRNSSK + R+I+D D+THLSRN  DRR+DE S D    ++   
Sbjct: 221 HAIRAKNMKQDQSSILKRNSSKASGRNIIDQDKTHLSRNWSDRRLDEGSWDQQGSSI-RA 279

Query: 55  GPTEDEKSDKILEIDPGK 2
           GPT+DEKSDKILEID GK
Sbjct: 280 GPTDDEKSDKILEIDTGK 297


>emb|CAN75939.1| hypothetical protein VITISV_040960 [Vitis vinifera]
          Length = 530

 Score =  172 bits (437), Expect = 8e-41
 Identities = 128/354 (36%), Positives = 164/354 (46%), Gaps = 64/354 (18%)
 Frame = -1

Query: 871 MGKTARWFRGLLGGSKKNSSFTCVSDSKPIKEK---KKWSFVKSFRDK------------ 737
           MGK ++WFRGLLG  K +S     + +    +K   ++WSFV+S+R+K            
Sbjct: 1   MGKASKWFRGLLGLKKTDSPAPTPAPAPARLDKSVKRRWSFVRSYREKDHTRHANDRRGA 60

Query: 736 ---QPEPPIPSVVNXXXXXXXXXXXXXSNAYFQGNDPNKHXXXXXXXXXXXXXXXXXXXX 566
              +P PP                    +AY  G DPNKH                    
Sbjct: 61  LYGEPHPP--------------------SAYADGVDPNKHAIAVAAATAAVAEAAVAAAQ 100

Query: 565 XXXXXVKLTSSGRCTTMDGI------RVDVWAAVKIQSAFRGYXXXXXXXXXXXXXXXXX 404
                V+LTSSGR               + WA +KIQS FRGY                 
Sbjct: 101 AAAAVVRLTSSGRSAAPSAYVSAGFSAREEWAVIKIQSLFRGYLRFAASLGKINMAEAEA 160

Query: 403 XV----------------------------RGHIMRKKT---MRCMQALVRVQSRARVGR 317
                                         RGHI+RK+T   +R MQALVR Q+RAR GR
Sbjct: 161 ADTVTTSSFCVSARRALRALKALVKLQALVRGHIVRKQTADMLRRMQALVRAQARARAGR 220

Query: 316 MHISETPHLNIKSSM-SQPGPATPEKYERTIRSNSTRHDRVSLLK--------RNSSKQN 164
             ISE+ H + KSS    PGPATPEK+E  IR+ + + D+ S+LK        RNSSK +
Sbjct: 221 AQISESSHSSGKSSQFHHPGPATPEKFEHAIRAKNMKQDQSSILKVCAVIFGLRNSSKAS 280

Query: 163 SRDILDWDRTHLSRNCLDRRMDERSRDYYKETLMMTGPTEDEKSDKILEIDPGK 2
            R+I+D D+THLSRN  DRR+DE S D    ++   GPT+DEKSDKILEID GK
Sbjct: 281 GRNIIDQDKTHLSRNWSDRRLDEGSWDQQGSSI-RAGPTDDEKSDKILEIDTGK 333


>ref|XP_002299555.1| predicted protein [Populus trichocarpa] gi|222846813|gb|EEE84360.1|
           predicted protein [Populus trichocarpa]
          Length = 477

 Score =  168 bits (426), Expect = 2e-39
 Identities = 120/302 (39%), Positives = 156/302 (51%), Gaps = 12/302 (3%)
 Frame = -1

Query: 871 MGKTARWFRGLLGGSKKNSSFTCVSDSKPIKEKKKWSFVKSFRDKQPEPPIPSVVNXXXX 692
           MGK ++WFR +LG  K +        ++  K+K++WSFVKS R+K  +            
Sbjct: 1   MGKASKWFRAVLGLKKPDPPLDHPQTTRS-KDKRRWSFVKSRREKDHDHQ-----QRQQD 54

Query: 691 XXXXXXXXXSNAYFQGNDPNKHXXXXXXXXXXXXXXXXXXXXXXXXXVKLTSSGRCTTMD 512
                        F+  DPNKH                         V+LTSSGRC    
Sbjct: 55  IEASKTGVLYGQEFE-EDPNKHAVAVAAATAAVAEAAVAAAQAAAEVVRLTSSGRCVNNS 113

Query: 511 --------GIRVDVWAAVKIQSAFRGYXXXXXXXXXXXXXXXXXXVRGHIMRKKT---MR 365
                   G+R D+ AAVKIQ+AFRGY                  VRGHI RK+T   + 
Sbjct: 114 VANVSGSLGLREDL-AAVKIQAAFRGYLARRALRALKALVRLQALVRGHIERKRTAEWLH 172

Query: 364 CMQALVRVQSRARVGRMHISETPHLNIKSSMSQ-PGPATPEKYERTIRSNSTRHDRVSLL 188
            MQAL+R QSRAR GR  ISE+ H + KSS  Q PGP TPEK+E  IR+ S ++++ S+L
Sbjct: 173 RMQALLRAQSRARSGRAQISESSHSSSKSSRFQHPGPPTPEKFEHAIRARSGKYEQSSIL 232

Query: 187 KRNSSKQNSRDILDWDRTHLSRNCLDRRMDERSRDYYKETLMMTGPTEDEKSDKILEIDP 8
           KR  SK   R I D D  HLS N  +RRMD+++ D ++  L  TG  +D+KSDKILEID 
Sbjct: 233 KRTGSKCKGRAIGDLDVAHLSLNWSERRMDDQTWD-HQVPLAGTGTIDDDKSDKILEIDT 291

Query: 7   GK 2
           GK
Sbjct: 292 GK 293


>ref|XP_002509726.1| calmodulin binding protein, putative [Ricinus communis]
           gi|223549625|gb|EEF51113.1| calmodulin binding protein,
           putative [Ricinus communis]
          Length = 491

 Score =  162 bits (410), Expect = 1e-37
 Identities = 120/315 (38%), Positives = 153/315 (48%), Gaps = 25/315 (7%)
 Frame = -1

Query: 871 MGKTARWFRGLLGGSKKN-----SSFTCVSDSKPIKEKKKWSFVKSFRDKQPEPPIPSVV 707
           MGK ++WFR +LG  K +      +      +   KE K+WSFVKS+R+K  +       
Sbjct: 1   MGKASKWFRAVLGFKKSDPVPPHQTHQHQQTANRPKETKRWSFVKSYREKDSK------- 53

Query: 706 NXXXXXXXXXXXXXSNAYFQGNDPNKHXXXXXXXXXXXXXXXXXXXXXXXXXVKLTSS-G 530
           N                Y +  DPNKH                         V+LTSS G
Sbjct: 54  NHSHNYNHSQQLTAQEVYNE-EDPNKHAIAVAAATAAVAEAAVAAAHAAAEVVRLTSSSG 112

Query: 529 RCTTMDGIRVDV-----------W----AAVKIQSAFRGYXXXXXXXXXXXXXXXXXXVR 395
           RC   +     V           W    AAVKIQSAFRGY                  VR
Sbjct: 113 RCVANNNNNTAVAYVSENSNSHCWREDLAAVKIQSAFRGYLARRALRALKALVRLQALVR 172

Query: 394 GHIMRKKT---MRCMQALVRVQSRARVGRMHISETPHLNIKSS-MSQPGPATPEKYERTI 227
           GHI RK+T   +  MQAL++ Q+RAR GR HISE+ H + KSS    PGP TPEK+E   
Sbjct: 173 GHIERKRTTAWLHRMQALLKAQARARAGRAHISESSHSSSKSSHFHHPGPPTPEKFEHAT 232

Query: 226 RSNSTRHDRVSLLKRNSSKQNSRDILDWDRTHLSRNCLDRRMDERSRDYYKETLMMTGPT 47
           R+ S ++++ S+LKR  SK    +I D DR H+S N  DRRMDERS +  +     +G  
Sbjct: 233 RARSGKYEQSSILKRIGSKSIGMEIGDEDRAHISFNWSDRRMDERSWE-QRVPSARSGTL 291

Query: 46  EDEKSDKILEIDPGK 2
           +DEKSDKILEID GK
Sbjct: 292 DDEKSDKILEIDTGK 306


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