BLASTX nr result

ID: Coptis23_contig00010458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010458
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530870.1| conserved hypothetical protein [Ricinus comm...   187   2e-45
ref|XP_002285688.1| PREDICTED: uncharacterized protein LOC100250...   185   8e-45
ref|XP_002304872.1| predicted protein [Populus trichocarpa] gi|1...   182   9e-44
ref|XP_002875563.1| hypothetical protein ARALYDRAFT_484754 [Arab...   179   8e-43
ref|NP_566858.1| uncharacterized protein [Arabidopsis thaliana] ...   177   2e-42

>ref|XP_002530870.1| conserved hypothetical protein [Ricinus communis]
           gi|223529559|gb|EEF31510.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 256

 Score =  187 bits (476), Expect = 2e-45
 Identities = 97/136 (71%), Positives = 102/136 (75%)
 Frame = +1

Query: 376 EKEATDRRKLVRNWHPTTKGTLKRSYRVPSKSAGQRLLKGIASLLSDXXXXXXXXXXXXX 555
           +KEA DRRKLV  WHPTTKGTL+R+YRVPSKS G+RLLK IASLLSD             
Sbjct: 135 DKEAADRRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIE------- 187

Query: 556 XXXXXXXXXXXXXXAASHKGCQIRRESAHGESVCCNNVRALFDELPTPHLVVEITAFPAG 735
                         A SHKGCQIRRESAHGESVCCNNVRALFDELPTPHLVVEITAFPAG
Sbjct: 188 --------------ATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLVVEITAFPAG 233

Query: 736 PLTEKDYAKAEKLEKV 783
           PLTEKDY KAEKLE+V
Sbjct: 234 PLTEKDYVKAEKLERV 249



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 36/77 (46%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
 Frame = +3

Query: 42  LLPKSLFPGSEG-------ALRRSFPIIITTRNGKATQTFINASLIENPVVWASRLCIYY 200
           LLPKSLFP  +         L+R   +   +   + T T  NASL+E PV+WA RLCI+Y
Sbjct: 30  LLPKSLFPTFDTNGNHPTKTLKRFLYLTKRSFATRKTVTTTNASLLETPVLWAGRLCIFY 89

Query: 201 ALLKAGLVGSPASPIFS 251
           ALLK+GL GS  +P+ S
Sbjct: 90  ALLKSGLAGSKTNPLVS 106


>ref|XP_002285688.1| PREDICTED: uncharacterized protein LOC100250156 [Vitis vinifera]
           gi|297746432|emb|CBI16488.3| unnamed protein product
           [Vitis vinifera]
          Length = 230

 Score =  185 bits (470), Expect = 8e-45
 Identities = 95/136 (69%), Positives = 102/136 (75%)
 Frame = +1

Query: 376 EKEATDRRKLVRNWHPTTKGTLKRSYRVPSKSAGQRLLKGIASLLSDXXXXXXXXXXXXX 555
           EKEA+D+RKLV  WHPTTKGTL+R+YRVPSKS G+RLLK IASLLSD             
Sbjct: 109 EKEASDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFID------- 161

Query: 556 XXXXXXXXXXXXXXAASHKGCQIRRESAHGESVCCNNVRALFDELPTPHLVVEITAFPAG 735
                         A+SHKGCQIRRESAHGESVCCNNVRALFDELPTPHL+VEIT FPAG
Sbjct: 162 --------------ASSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAG 207

Query: 736 PLTEKDYAKAEKLEKV 783
           PLTE DY KAEKLEKV
Sbjct: 208 PLTENDYVKAEKLEKV 223


>ref|XP_002304872.1| predicted protein [Populus trichocarpa] gi|118488609|gb|ABK96117.1|
           unknown [Populus trichocarpa]
           gi|222842304|gb|EEE79851.1| predicted protein [Populus
           trichocarpa]
          Length = 256

 Score =  182 bits (461), Expect = 9e-44
 Identities = 93/136 (68%), Positives = 101/136 (74%)
 Frame = +1

Query: 376 EKEATDRRKLVRNWHPTTKGTLKRSYRVPSKSAGQRLLKGIASLLSDXXXXXXXXXXXXX 555
           +KEA D+RKLV  WHPTTKGTL+R+YRVPSKS GQR LK IA+LLS+             
Sbjct: 135 DKEAADKRKLVSKWHPTTKGTLRRNYRVPSKSEGQRRLKAIAALLSEDDYFVD------- 187

Query: 556 XXXXXXXXXXXXXXAASHKGCQIRRESAHGESVCCNNVRALFDELPTPHLVVEITAFPAG 735
                         A SHKGCQIRRESAHGESVCCNNVRALFDELPTPHL+VEITAFPAG
Sbjct: 188 --------------ATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLLVEITAFPAG 233

Query: 736 PLTEKDYAKAEKLEKV 783
           PLTEKDY KAEKLE+V
Sbjct: 234 PLTEKDYVKAEKLERV 249



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 38/78 (48%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
 Frame = +3

Query: 33  SLVLLPKSLFPGSEGALRRSFPIIIT--TRNGKAT---QTFINASLIENPVVWASRLCIY 197
           S  LLPKSLFP  +   +    +     TR+ K T      ++ASLIE PV+W  RLCI+
Sbjct: 28  STTLLPKSLFPTFDCPSKTFSRLFFNGNTRDRKLTAGASFTVHASLIEAPVLWVGRLCIF 87

Query: 198 YALLKAGLVGSPASPIFS 251
           YALLKAGL GS A+P+ S
Sbjct: 88  YALLKAGLAGSEANPLVS 105


>ref|XP_002875563.1| hypothetical protein ARALYDRAFT_484754 [Arabidopsis lyrata subsp.
           lyrata] gi|297321401|gb|EFH51822.1| hypothetical protein
           ARALYDRAFT_484754 [Arabidopsis lyrata subsp. lyrata]
          Length = 248

 Score =  179 bits (453), Expect = 8e-43
 Identities = 90/136 (66%), Positives = 99/136 (72%)
 Frame = +1

Query: 376 EKEATDRRKLVRNWHPTTKGTLKRSYRVPSKSAGQRLLKGIASLLSDXXXXXXXXXXXXX 555
           +K+A D+RKLV  WHPTTKGTL+R+YR+PSKS G RLLK IASLLSD             
Sbjct: 127 DKDAADKRKLVSKWHPTTKGTLRRNYRIPSKSEGNRLLKAIASLLSDDDHFRD------- 179

Query: 556 XXXXXXXXXXXXXXAASHKGCQIRRESAHGESVCCNNVRALFDELPTPHLVVEITAFPAG 735
                         A SHKGCQIRRESAHG+SVCCNNVRALFDELPTPHLVVEIT FPAG
Sbjct: 180 --------------ATSHKGCQIRRESAHGQSVCCNNVRALFDELPTPHLVVEITPFPAG 225

Query: 736 PLTEKDYAKAEKLEKV 783
           PLTE DY KAEKLE++
Sbjct: 226 PLTENDYLKAEKLERI 241



 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 38/75 (50%), Positives = 49/75 (65%)
 Frame = +3

Query: 27  DPSLVLLPKSLFPGSEGALRRSFPIIITTRNGKATQTFINASLIENPVVWASRLCIYYAL 206
           +PS  LLPKS+FPGS+  L R F       NG A      ASL+E PV+WA R+C++YAL
Sbjct: 27  NPSCFLLPKSIFPGSKLTLHRFFRYPKKISNGSA-----RASLLETPVLWAGRICVFYAL 81

Query: 207 LKAGLVGSPASPIFS 251
           +KAG  GS ++PI S
Sbjct: 82  VKAGFAGSKSNPIVS 96


>ref|NP_566858.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9294365|dbj|BAB02262.1| unnamed protein product
           [Arabidopsis thaliana] gi|15292709|gb|AAK92723.1|
           unknown protein [Arabidopsis thaliana]
           gi|21281097|gb|AAM45104.1| unknown protein [Arabidopsis
           thaliana] gi|332644183|gb|AEE77704.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 249

 Score =  177 bits (450), Expect = 2e-42
 Identities = 89/136 (65%), Positives = 99/136 (72%)
 Frame = +1

Query: 376 EKEATDRRKLVRNWHPTTKGTLKRSYRVPSKSAGQRLLKGIASLLSDXXXXXXXXXXXXX 555
           +K+A D+RKLV  WHPTTKGTL+R+YR+PSK+ G RLLK IASLLSD             
Sbjct: 128 DKDAADKRKLVSKWHPTTKGTLRRNYRIPSKAEGNRLLKAIASLLSDDDHFRD------- 180

Query: 556 XXXXXXXXXXXXXXAASHKGCQIRRESAHGESVCCNNVRALFDELPTPHLVVEITAFPAG 735
                         A SHKGCQIRRESAHG+SVCCNNVRALFDELPTPHLVVEIT FPAG
Sbjct: 181 --------------ATSHKGCQIRRESAHGQSVCCNNVRALFDELPTPHLVVEITPFPAG 226

Query: 736 PLTEKDYAKAEKLEKV 783
           PLTE DY KAEKLE++
Sbjct: 227 PLTENDYLKAEKLERI 242



 Score = 70.1 bits (170), Expect = 5e-10
 Identities = 35/75 (46%), Positives = 48/75 (64%)
 Frame = +3

Query: 27  DPSLVLLPKSLFPGSEGALRRSFPIIITTRNGKATQTFINASLIENPVVWASRLCIYYAL 206
           +PS +LL KS+FPGS+  L R F       NG        ASL+E P++WA R+C++YAL
Sbjct: 27  NPSCLLLQKSIFPGSKLTLHRIFRYPKKISNGST-----RASLLETPILWAGRICVFYAL 81

Query: 207 LKAGLVGSPASPIFS 251
           +KAG  GS ++PI S
Sbjct: 82  VKAGFAGSKSNPIVS 96


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