BLASTX nr result

ID: Coptis23_contig00010439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010439
         (1436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144384.1| PREDICTED: protein XRI1-like [Cucumis sativu...   286   1e-74
ref|XP_002303048.1| predicted protein [Populus trichocarpa] gi|2...   281   3e-73
ref|XP_002521080.1| conserved hypothetical protein [Ricinus comm...   276   1e-71
ref|XP_003532282.1| PREDICTED: protein XRI1-like [Glycine max]        268   2e-69
ref|XP_003547810.1| PREDICTED: protein XRI1-like [Glycine max]        263   1e-67

>ref|XP_004144384.1| PREDICTED: protein XRI1-like [Cucumis sativus]
            gi|449529551|ref|XP_004171763.1| PREDICTED: protein
            XRI1-like [Cucumis sativus]
          Length = 304

 Score =  286 bits (731), Expect = 1e-74
 Identities = 159/301 (52%), Positives = 203/301 (67%), Gaps = 5/301 (1%)
 Frame = -1

Query: 1400 DNELWEWRGEDYYLQKDCNLDISHSLWDS-NQNEHLPYMFDDTTPVKACGDLAYSVSDSR 1224
            +N+ W W G+ Y +QKD +++IS  LWD  ++N  L Y+FD+TTPVKACGDLAY V+ S 
Sbjct: 7    NNDTWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAYHVTCS- 65

Query: 1223 KNSNKEVEEYKEYSSQVKRRRMLQFSPLSTDSLLCDENTQFAFEKSKDKEDYMEEVSPEN 1044
             + NK+ EE +E  SQ KRRRMLQF+    ++ +C E+    F KS +K         E 
Sbjct: 66   DDRNKKSEESRETHSQAKRRRMLQFTAQDLETSICREDLSSRFLKSHNKVVSSPAALAEV 125

Query: 1043 TQWDSGCFG--DRSAFS-NGGLDQSSEEWLSNCFSDGGMQLSSDDMNVSGFSDDQIDISE 873
            +     C G  D    S +  LD S E W++ C +D  M  S +D++ +G SD QID+SE
Sbjct: 126  SYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSE 185

Query: 872  FCN-ISEMESDSVKICPTPSPSPKIVYKGRKSHILTPTNLASSVAYPFALIKPCGVHGDM 696
            FC+   E +S+ V+  PT +P P I++KGRKS+I TPT LASSVAYPFA IKPCG HGD+
Sbjct: 186  FCDGAPEFKSNVVQHHPTRAP-PNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDV 244

Query: 695  TLKEINQRILSPAQSISKNDRDDNPSVSYPTSAFSGKPVVVKTKIRTEGGKGSITIMRTR 516
            TLK+INQRI +P  S  K+  +D PS SYPTSAFSGKPVV KTKI TEGGKGSITIMRTR
Sbjct: 245  TLKDINQRIRTPPPSKLKHQPED-PSESYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTR 303

Query: 515  G 513
            G
Sbjct: 304  G 304


>ref|XP_002303048.1| predicted protein [Populus trichocarpa] gi|222844774|gb|EEE82321.1|
            predicted protein [Populus trichocarpa]
          Length = 280

 Score =  281 bits (719), Expect = 3e-73
 Identities = 160/285 (56%), Positives = 193/285 (67%), Gaps = 9/285 (3%)
 Frame = -1

Query: 1340 DISHSLWD--SNQNEHLPYMFDDTTPVKACGDLAYSVSDS------RKNSNKEVEEYKEY 1185
            D+S  LW+  +   E L YM D+TTPVKAC DLAY V+          N NKE EE +E 
Sbjct: 1    DVSQRLWNEVTLNGEDLSYMLDETTPVKACADLAYHVNHDGMVLWMSDNMNKEPEERRET 60

Query: 1184 SSQVKRRRMLQFSPLSTDSLLCDENTQFAFEKSKDKEDYMEEVSPENTQWDSGCFGDRSA 1005
              Q KRRR LQF     DS  CDE+    F KS + E+ +EEV P+ +QWDSG + D SA
Sbjct: 61   CFQFKRRR-LQFDTHLADSPFCDEDLTSVFLKSNETEESLEEVFPQASQWDSG-YQDMSA 118

Query: 1004 FSNGGLDQSSEEWLSNCFSDGGMQLSSDDMNVSGFSDDQIDISEFCNIS-EMESDSVKIC 828
                GLD SS+ W+++CF+D GM  S +DMN  G SD QIDIS+FCN   E E+ +V+ C
Sbjct: 119  SCYNGLDPSSDPWIADCFNDSGMHFSPNDMNFPGASDIQIDISDFCNDPPEFEASTVQKC 178

Query: 827  PTPSPSPKIVYKGRKSHILTPTNLASSVAYPFALIKPCGVHGDMTLKEINQRILSPAQSI 648
               +P   +V+KG KS I TPT LA+SVAYPFA IKPCGVHGD+TL EINQRI +P  S 
Sbjct: 179  VPRTPR-NVVFKGTKSFIQTPTKLATSVAYPFAFIKPCGVHGDVTLNEINQRIRTPPPSK 237

Query: 647  SKNDRDDNPSVSYPTSAFSGKPVVVKTKIRTEGGKGSITIMRTRG 513
            SK  +D++P V YP SAFSGKPVV KTKIRTEGGKGSITIMRT+G
Sbjct: 238  SK-QKDEDP-VVYPMSAFSGKPVVGKTKIRTEGGKGSITIMRTKG 280


>ref|XP_002521080.1| conserved hypothetical protein [Ricinus communis]
            gi|223539649|gb|EEF41231.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 293

 Score =  276 bits (706), Expect = 1e-71
 Identities = 157/292 (53%), Positives = 193/292 (66%), Gaps = 16/292 (5%)
 Frame = -1

Query: 1340 DISHSLWD--SNQNEHLPYMFDDTTPVKACGDLAYSVSDSRKNSNKEVEEYKEYSSQVKR 1167
            D+S  LW+  +   E L YM D+TTPVKACGDLAY V+ S  N +KE EE++E SSQ+KR
Sbjct: 8    DVSECLWNEVTLNEEDLSYMLDETTPVKACGDLAYHVNHS-DNMHKEPEEHRETSSQLKR 66

Query: 1166 RRMLQFSPLSTDSLLCDENTQFAFEKS-----------KDKEDYMEEVSPENTQWDSGCF 1020
            RRMLQF   + DS LC E     F +S           +++ED +EEV P+ + W  G  
Sbjct: 67   RRMLQFDTQAADSPLCHEEISSVFLQSNATVNVFVTYVQEREDSLEEVLPQASDWVPGFS 126

Query: 1019 GDRSAFSNGGLDQSSEEWLSNCFSDGGMQLSSDDMNVSGFSDDQIDISEFCNI---SEME 849
             D SA S   LD SSE WL++CF+D  M LS +DMN  G  D QIDISEFCN    +E  
Sbjct: 127  ADVSASSYEALDHSSEGWLADCFNDTEMGLSPNDMNFPGACDVQIDISEFCNGPLGNEAH 186

Query: 848  SDSVKICPTPSPSPKIVYKGRKSHILTPTNLASSVAYPFALIKPCGVHGDMTLKEINQRI 669
            +   +I  TP     +++KG+KS I TPT LASSV YPFA IKPCG HGD+TLK+INQ+I
Sbjct: 187  AVQKRITRTPR---NVIFKGKKSFIRTPTKLASSVVYPFAFIKPCGFHGDVTLKDINQKI 243

Query: 668  LSPAQSISKNDRDDNPSVSYPTSAFSGKPVVVKTKIRTEGGKGSITIMRTRG 513
             +P  S  K + +D    +YPTSAFSGKPVV KTKIRTEGGKGSITIMRT+G
Sbjct: 244  RTPPPSKLKQNEED--PAAYPTSAFSGKPVVGKTKIRTEGGKGSITIMRTKG 293


>ref|XP_003532282.1| PREDICTED: protein XRI1-like [Glycine max]
          Length = 302

 Score =  268 bits (686), Expect = 2e-69
 Identities = 156/312 (50%), Positives = 203/312 (65%), Gaps = 4/312 (1%)
 Frame = -1

Query: 1436 MDYSTTTTTNDHDNELWEWRGEDYYLQKDCNLDISHSLWDS-NQNEHLPYMF-DDTTPVK 1263
            MDYS     ND+  E W+W  EDY LQ+  N +IS  +W+  +QNE L ++F D+TTPVK
Sbjct: 1    MDYS-----NDN-KEPWDWHREDYCLQRSFNYEISPGIWNGVSQNEDLSFVFNDETTPVK 54

Query: 1262 ACGDLAYSVSDSRKNS-NKEVEEYKEYSSQVKRRRMLQFSPLSTDSLLCDENTQFAFEKS 1086
            ACGD AY+V++S  N+  KE ++  + S Q+KRRRMLQF+      LL +E    A+ K 
Sbjct: 55   ACGDFAYNVNNSESNNVQKESDKCLKSSYQIKRRRMLQFNSQDGGHLLSNEQMSSAYLKG 114

Query: 1085 KDKEDYMEEVSPENTQWDSGCFGDRSAFSNGGLDQSSEEWLSNCFSDGGMQLSSDDMNVS 906
            K  E+  E+V PE +QW SG  G  SA +   L+ S+E WL++CF D  MQL  DD+N S
Sbjct: 115  K--EEPKEDVFPEFSQWVSGTPGSASASNYEDLE-SAEGWLADCFKDAEMQLCPDDLNFS 171

Query: 905  GFSDDQIDISEFCNISEM-ESDSVKICPTPSPSPKIVYKGRKSHILTPTNLASSVAYPFA 729
            G  + Q+D+++  N     E + V+   T +P   I++KG KS I TPT LA+SVAYPFA
Sbjct: 172  GADEVQVDVADLGNFPPACEQNVVQHGFTQTPK-NIIFKGGKSFIETPTKLAASVAYPFA 230

Query: 728  LIKPCGVHGDMTLKEINQRILSPAQSISKNDRDDNPSVSYPTSAFSGKPVVVKTKIRTEG 549
             IKPCG HGD+TLKEINQRILSP   +    +      +YP SAFSGKPVV KT+I  EG
Sbjct: 231  FIKPCGAHGDVTLKEINQRILSPPPPLKSQQQSMEDPSAYPKSAFSGKPVVGKTRIHIEG 290

Query: 548  GKGSITIMRTRG 513
            GKGSITIMRT+G
Sbjct: 291  GKGSITIMRTKG 302


>ref|XP_003547810.1| PREDICTED: protein XRI1-like [Glycine max]
          Length = 309

 Score =  263 bits (671), Expect = 1e-67
 Identities = 160/317 (50%), Positives = 205/317 (64%), Gaps = 9/317 (2%)
 Frame = -1

Query: 1436 MDYSTTTTTNDHD-NELWEWRGEDYYLQKDCNLDISHSLW-DSNQNEH-LPYMFDD-TTP 1269
            MDY+     NDH   E W+W+G+ Y L++  + +IS  LW D  QNE  L YM DD TTP
Sbjct: 1    MDYNN----NDHGAREPWDWQGKKYSLRRTFDFEISEELWNDVPQNEEDLSYMLDDETTP 56

Query: 1268 VKACGDLAYSVSDSRKNSNKEVEEYKEYSSQVKRRRMLQFSPLSTDSLLCDENTQFAFEK 1089
            VKACGDLAY+V+++  N  KE+EE +E  SQ KRRRMLQF+   +D  L +E    ++ K
Sbjct: 57   VKACGDLAYNVNNA-DNMQKELEECRETYSQAKRRRMLQFNSQESDQSLSNEGMSLSYLK 115

Query: 1088 SKDKEDYMEEVSPENTQWDSGC----FGDRSAFSNGGLDQSSEEWLSNCFSDGGMQLSSD 921
            +  KED ++E+ PE +QW SG      G+ SA     L+ S+E WL++ F+D  M +S +
Sbjct: 116  N-GKEDPVKEIFPEVSQWVSGASDFTLGNASASDYVDLE-STETWLADYFNDAEMDISPE 173

Query: 920  DMNVSGFSDDQIDISEFCNIS-EMESDSVKICPTPSPSPKIVYKGRKSHILTPTNLASSV 744
            ++  S   D QID +E   I    E + V+    P  +  I++KGRKS I  PT LASSV
Sbjct: 174  ELKFSVADDVQIDGTEVSAIKPSREQNVVQQTHIPRTTRNIIFKGRKSFIHMPTKLASSV 233

Query: 743  AYPFALIKPCGVHGDMTLKEINQRILSPAQSISKNDRDDNPSVSYPTSAFSGKPVVVKTK 564
            AYPFA IKP G HGD+TLKEINQ I +P    SK   DD+PS +YP SAFSGKPVV KTK
Sbjct: 234  AYPFAFIKPSGAHGDVTLKEINQHIQTPPPLKSKQSNDDDPS-AYPKSAFSGKPVVGKTK 292

Query: 563  IRTEGGKGSITIMRTRG 513
            IRTEGGKGSITI RT+G
Sbjct: 293  IRTEGGKGSITITRTKG 309


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