BLASTX nr result

ID: Coptis23_contig00010430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010430
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN28366.1| unknown [Zea mays] gi|413944008|gb|AFW76657.1| gb...   171   6e-41
gb|AAL68853.1|AF466199_12 gb protein [Sorghum bicolor]                168   5e-40
ref|XP_002436663.1| hypothetical protein SORBIDRAFT_10g006750 [S...   168   5e-40
ref|XP_003560950.1| PREDICTED: uncharacterized protein LOC100833...   167   6e-40
dbj|BAJ99327.1| predicted protein [Hordeum vulgare subsp. vulgar...   167   6e-40

>gb|ACN28366.1| unknown [Zea mays] gi|413944008|gb|AFW76657.1| gb protein [Zea
           mays]
          Length = 158

 Score =  171 bits (433), Expect = 6e-41
 Identities = 87/144 (60%), Positives = 95/144 (65%)
 Frame = +3

Query: 3   TREVYEEKLRSGNLYHHDPTIKPGLGSARCPRCLSLLNPTSESAEWAITSVLHDATAVAG 182
           TREVYEEKLRSG   H DPTI PGLGS RCPRCLSLLNPT+   +WAITSVLHDATAVAG
Sbjct: 3   TREVYEEKLRSGAHLHRDPTINPGLGSPRCPRCLSLLNPTAGKRDWAITSVLHDATAVAG 62

Query: 183 SGAGAMLSAVHGFNTGMPFVQKYVKGPKWXXXXXXXXXXXXXXXXXXXXXXYALPKVTQF 362
           SGAGA+LSAVHGFNTG+PFVQK+VKGPKW                      YALP+  Q 
Sbjct: 63  SGAGALLSAVHGFNTGIPFVQKHVKGPKWLQLLVGVPPLLIFSGASAVFGAYALPRFVQL 122

Query: 363 SVTXXXXXXXXXXXXXXHLTRYIE 434
           +VT              H+TR IE
Sbjct: 123 TVTSYYAASTGSQYAVSHITRQIE 146


>gb|AAL68853.1|AF466199_12 gb protein [Sorghum bicolor]
          Length = 1009

 Score =  168 bits (425), Expect = 5e-40
 Identities = 86/144 (59%), Positives = 94/144 (65%)
 Frame = +3

Query: 3    TREVYEEKLRSGNLYHHDPTIKPGLGSARCPRCLSLLNPTSESAEWAITSVLHDATAVAG 182
            TREVYEEKLRSG   H DPTI PGLGS RCPRCLSLLNPT+   +WAITSVLHDATAVAG
Sbjct: 854  TREVYEEKLRSGAHLHRDPTINPGLGSPRCPRCLSLLNPTAGERDWAITSVLHDATAVAG 913

Query: 183  SGAGAMLSAVHGFNTGMPFVQKYVKGPKWXXXXXXXXXXXXXXXXXXXXXXYALPKVTQF 362
            SGAGA+LSAVHGFNTG+PFVQK+VKGPKW                      YALP+  Q 
Sbjct: 914  SGAGALLSAVHGFNTGIPFVQKHVKGPKWLQLLVGVPPLLMFSGASAVFGAYALPRFAQL 973

Query: 363  SVTXXXXXXXXXXXXXXHLTRYIE 434
            +VT               +TR IE
Sbjct: 974  TVTSYYAASTGSQYAVSQITRQIE 997


>ref|XP_002436663.1| hypothetical protein SORBIDRAFT_10g006750 [Sorghum bicolor]
           gi|241914886|gb|EER88030.1| hypothetical protein
           SORBIDRAFT_10g006750 [Sorghum bicolor]
          Length = 158

 Score =  168 bits (425), Expect = 5e-40
 Identities = 86/144 (59%), Positives = 94/144 (65%)
 Frame = +3

Query: 3   TREVYEEKLRSGNLYHHDPTIKPGLGSARCPRCLSLLNPTSESAEWAITSVLHDATAVAG 182
           TREVYEEKLRSG   H DPTI PGLGS RCPRCLSLLNPT+   +WAITSVLHDATAVAG
Sbjct: 3   TREVYEEKLRSGAHLHRDPTINPGLGSPRCPRCLSLLNPTAGERDWAITSVLHDATAVAG 62

Query: 183 SGAGAMLSAVHGFNTGMPFVQKYVKGPKWXXXXXXXXXXXXXXXXXXXXXXYALPKVTQF 362
           SGAGA+LSAVHGFNTG+PFVQK+VKGPKW                      YALP+  Q 
Sbjct: 63  SGAGALLSAVHGFNTGIPFVQKHVKGPKWLQLLVGVPPLLMFSGASAVFGAYALPRFAQL 122

Query: 363 SVTXXXXXXXXXXXXXXHLTRYIE 434
           +VT               +TR IE
Sbjct: 123 TVTSYYAASTGSQYAVSQITRQIE 146


>ref|XP_003560950.1| PREDICTED: uncharacterized protein LOC100833454 [Brachypodium
            distachyon]
          Length = 997

 Score =  167 bits (424), Expect = 6e-40
 Identities = 89/147 (60%), Positives = 95/147 (64%), Gaps = 2/147 (1%)
 Frame = +3

Query: 3    TREVYEEKLRSGNLYHHDPTIKPGLGSARCPRCLSLLNPTSESAE--WAITSVLHDATAV 176
            TREVYEEKLRSG   H DPTI PGLGSARCPRCLSLLNPT+ S E  WAITSVLHDATAV
Sbjct: 841  TREVYEEKLRSGAHLHRDPTINPGLGSARCPRCLSLLNPTTNSGEGDWAITSVLHDATAV 900

Query: 177  AGSGAGAMLSAVHGFNTGMPFVQKYVKGPKWXXXXXXXXXXXXXXXXXXXXXXYALPKVT 356
             GSGAGAMLSAVHGFNTG+PFVQK+VKGPKW                      YALP   
Sbjct: 901  TGSGAGAMLSAVHGFNTGIPFVQKHVKGPKWLHLLVGVPPLILFSGASALFGAYALPTFA 960

Query: 357  QFSVTXXXXXXXXXXXXXXHLTRYIEE 437
            Q +VT               +TR IE+
Sbjct: 961  QLTVTSYYAASSASHYAVSQITRQIEK 987


>dbj|BAJ99327.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326528977|dbj|BAJ97510.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 160

 Score =  167 bits (424), Expect = 6e-40
 Identities = 88/147 (59%), Positives = 96/147 (65%), Gaps = 2/147 (1%)
 Frame = +3

Query: 3   TREVYEEKLRSGNLYHHDPTIKPGLGSARCPRCLSLLNPTSESAE--WAITSVLHDATAV 176
           TREVYEEKLRSG   H DPTI PGLGSARCPRCLSLLNPT+ S +  WAITSVLHDATAV
Sbjct: 3   TREVYEEKLRSGAHLHRDPTINPGLGSARCPRCLSLLNPTTNSGQGDWAITSVLHDATAV 62

Query: 177 AGSGAGAMLSAVHGFNTGMPFVQKYVKGPKWXXXXXXXXXXXXXXXXXXXXXXYALPKVT 356
            GSGAGAMLSAVHGFNTG+PFVQK+VKGPKW                      YALP   
Sbjct: 63  TGSGAGAMLSAVHGFNTGIPFVQKHVKGPKWLHLLVGVPPLILFSGASALFGAYALPTFA 122

Query: 357 QFSVTXXXXXXXXXXXXXXHLTRYIEE 437
           Q +VT               +TR+IE+
Sbjct: 123 QLTVTSYYAASSASHYAVSQITRHIEK 149


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