BLASTX nr result

ID: Coptis23_contig00010429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010429
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236791.1| uncharacterized protein LOC100306051 [Glycin...    56   2e-14
ref|NP_001065588.1| Os11g0116400 [Oryza sativa Japonica Group] g...    53   7e-14
ref|NP_001065991.1| Os12g0115900 [Oryza sativa Japonica Group] g...    52   1e-13
gb|EEC68728.1| hypothetical protein OsI_37231 [Oryza sativa Indi...    52   1e-13
dbj|BAJ88935.1| predicted protein [Hordeum vulgare subsp. vulgare]     52   2e-13

>ref|NP_001236791.1| uncharacterized protein LOC100306051 [Glycine max]
           gi|255627395|gb|ACU14042.1| unknown [Glycine max]
          Length = 237

 Score = 55.8 bits (133), Expect(2) = 2e-14
 Identities = 25/43 (58%), Positives = 32/43 (74%)
 Frame = +2

Query: 5   FLPIRTSPKMPSRSRYPRIFTFTSNDIKVGSNVEVDGAPWRVI 133
           FL    +P   S+ R+ RI+  TSNDIKVG+N+EVDGAPWRV+
Sbjct: 33  FLLSMRTPSSSSKPRFLRIYALTSNDIKVGTNLEVDGAPWRVL 75



 Score = 47.8 bits (112), Expect(2) = 2e-14
 Identities = 20/22 (90%), Positives = 22/22 (100%)
 Frame = +3

Query: 135 FLHVKPGKGAAFVRTKMRNYVT 200
           FLHVKPGKGAAFVRTKM+NY+T
Sbjct: 77  FLHVKPGKGAAFVRTKMKNYIT 98


>ref|NP_001065588.1| Os11g0116400 [Oryza sativa Japonica Group]
           gi|77548436|gb|ABA91233.1| Elongation factor P,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113644292|dbj|BAF27433.1| Os11g0116400 [Oryza sativa
           Japonica Group] gi|125533173|gb|EAY79721.1| hypothetical
           protein OsI_34873 [Oryza sativa Indica Group]
           gi|125575992|gb|EAZ17214.1| hypothetical protein
           OsJ_32726 [Oryza sativa Japonica Group]
           gi|215765459|dbj|BAG87156.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 229

 Score = 52.8 bits (125), Expect(2) = 7e-14
 Identities = 22/33 (66%), Positives = 28/33 (84%)
 Frame = +2

Query: 35  PSRSRYPRIFTFTSNDIKVGSNVEVDGAPWRVI 133
           P RSR  R++  +SNDI+VGSN+EVDGAPW+VI
Sbjct: 36  PLRSRLTRVYALSSNDIRVGSNLEVDGAPWKVI 68



 Score = 48.9 bits (115), Expect(2) = 7e-14
 Identities = 21/22 (95%), Positives = 22/22 (100%)
 Frame = +3

Query: 135 FLHVKPGKGAAFVRTKMRNYVT 200
           FLHVKPGKGAAFVRTKMRNY+T
Sbjct: 70  FLHVKPGKGAAFVRTKMRNYIT 91


>ref|NP_001065991.1| Os12g0115900 [Oryza sativa Japonica Group]
           gi|108862098|gb|ABA96292.2| Elongation factor P,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113648498|dbj|BAF29010.1| Os12g0115900 [Oryza sativa
           Japonica Group] gi|215764962|dbj|BAG86659.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 229

 Score = 52.0 bits (123), Expect(2) = 1e-13
 Identities = 21/33 (63%), Positives = 28/33 (84%)
 Frame = +2

Query: 35  PSRSRYPRIFTFTSNDIKVGSNVEVDGAPWRVI 133
           P RSR  R++  +SNDI+VGSN+EVDGAPW+V+
Sbjct: 36  PLRSRLTRVYALSSNDIRVGSNLEVDGAPWKVL 68



 Score = 48.9 bits (115), Expect(2) = 1e-13
 Identities = 21/22 (95%), Positives = 22/22 (100%)
 Frame = +3

Query: 135 FLHVKPGKGAAFVRTKMRNYVT 200
           FLHVKPGKGAAFVRTKMRNY+T
Sbjct: 70  FLHVKPGKGAAFVRTKMRNYIT 91


>gb|EEC68728.1| hypothetical protein OsI_37231 [Oryza sativa Indica Group]
          Length = 228

 Score = 52.0 bits (123), Expect(2) = 1e-13
 Identities = 21/33 (63%), Positives = 28/33 (84%)
 Frame = +2

Query: 35  PSRSRYPRIFTFTSNDIKVGSNVEVDGAPWRVI 133
           P RSR  R++  +SNDI+VGSN+EVDGAPW+V+
Sbjct: 35  PLRSRLTRVYALSSNDIRVGSNLEVDGAPWKVL 67



 Score = 48.9 bits (115), Expect(2) = 1e-13
 Identities = 21/22 (95%), Positives = 22/22 (100%)
 Frame = +3

Query: 135 FLHVKPGKGAAFVRTKMRNYVT 200
           FLHVKPGKGAAFVRTKMRNY+T
Sbjct: 69  FLHVKPGKGAAFVRTKMRNYIT 90


>dbj|BAJ88935.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 236

 Score = 51.6 bits (122), Expect(2) = 2e-13
 Identities = 20/33 (60%), Positives = 28/33 (84%)
 Frame = +2

Query: 35  PSRSRYPRIFTFTSNDIKVGSNVEVDGAPWRVI 133
           P RSR+ R++  +SNDIKVG N+EVDGAPW+++
Sbjct: 43  PLRSRFTRLYALSSNDIKVGFNLEVDGAPWKIL 75



 Score = 48.9 bits (115), Expect(2) = 2e-13
 Identities = 21/22 (95%), Positives = 22/22 (100%)
 Frame = +3

Query: 135 FLHVKPGKGAAFVRTKMRNYVT 200
           FLHVKPGKGAAFVRTKMRNY+T
Sbjct: 77  FLHVKPGKGAAFVRTKMRNYIT 98


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