BLASTX nr result

ID: Coptis23_contig00010426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010426
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284846.1| PREDICTED: leucine-rich repeat-containing pr...   114   1e-23
ref|XP_003634682.1| PREDICTED: leucine-rich repeat-containing pr...   114   1e-23
ref|XP_004133702.1| PREDICTED: leucine-rich repeat-containing pr...   110   1e-22
ref|XP_002528571.1| leucine-rich repeat-containing protein, puta...   100   1e-19
ref|XP_002316909.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18

>ref|XP_002284846.1| PREDICTED: leucine-rich repeat-containing protein 40-like isoform 1
           [Vitis vinifera]
          Length = 588

 Score =  114 bits (284), Expect = 1e-23
 Identities = 68/136 (50%), Positives = 78/136 (57%)
 Frame = -1

Query: 408 ELSLSGLSLSTVPPEVWESDDILKVDLSRNSIQELPKELVSCASLXXXXXXXXXXXXXXX 229
           ELSL G+ LS VP +VWES +I+KVDLSRNSIQELP EL SC S                
Sbjct: 366 ELSLEGMGLSAVPAQVWESSEIVKVDLSRNSIQELPPELTSCVS---------------- 409

Query: 228 XXXXXXXXLVSCASLQALILSGNKIKEWPGSVXXXXXXXXXXXXXXNSLKQIPSDGFGSL 49
                         LQALILS NKI+EWPG +              N L+QIP+DGF ++
Sbjct: 410 --------------LQALILSRNKIQEWPGVILKSLPNLSCLKLDNNPLRQIPADGFQAV 455

Query: 48  LKLQILDLSGNIASLP 1
            KLQILDLSGN ASLP
Sbjct: 456 SKLQILDLSGNSASLP 471


>ref|XP_003634682.1| PREDICTED: leucine-rich repeat-containing protein 40-like isoform 2
           [Vitis vinifera] gi|302143032|emb|CBI20327.3| unnamed
           protein product [Vitis vinifera]
          Length = 584

 Score =  114 bits (284), Expect = 1e-23
 Identities = 68/136 (50%), Positives = 78/136 (57%)
 Frame = -1

Query: 408 ELSLSGLSLSTVPPEVWESDDILKVDLSRNSIQELPKELVSCASLXXXXXXXXXXXXXXX 229
           ELSL G+ LS VP +VWES +I+KVDLSRNSIQELP EL SC S                
Sbjct: 362 ELSLEGMGLSAVPAQVWESSEIVKVDLSRNSIQELPPELTSCVS---------------- 405

Query: 228 XXXXXXXXLVSCASLQALILSGNKIKEWPGSVXXXXXXXXXXXXXXNSLKQIPSDGFGSL 49
                         LQALILS NKI+EWPG +              N L+QIP+DGF ++
Sbjct: 406 --------------LQALILSRNKIQEWPGVILKSLPNLSCLKLDNNPLRQIPADGFQAV 451

Query: 48  LKLQILDLSGNIASLP 1
            KLQILDLSGN ASLP
Sbjct: 452 SKLQILDLSGNSASLP 467


>ref|XP_004133702.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Cucumis
           sativus] gi|449478165|ref|XP_004155239.1| PREDICTED:
           leucine-rich repeat-containing protein 40-like [Cucumis
           sativus]
          Length = 583

 Score =  110 bits (275), Expect = 1e-22
 Identities = 65/136 (47%), Positives = 76/136 (55%)
 Frame = -1

Query: 408 ELSLSGLSLSTVPPEVWESDDILKVDLSRNSIQELPKELVSCASLXXXXXXXXXXXXXXX 229
           ELSL G  LS VP EVWES +++K+DLS+NS QELP EL SC SL               
Sbjct: 362 ELSLEGQGLSAVPSEVWESSELMKLDLSKNSFQELPVELSSCTSL--------------- 406

Query: 228 XXXXXXXXLVSCASLQALILSGNKIKEWPGSVXXXXXXXXXXXXXXNSLKQIPSDGFGSL 49
                          Q LILS NKIK+WPG++              N LKQIPSDGF ++
Sbjct: 407 ---------------QTLILSRNKIKDWPGAILKTLPNLTCLKLDNNPLKQIPSDGFQAV 451

Query: 48  LKLQILDLSGNIASLP 1
            KLQ+LDLSGNIA LP
Sbjct: 452 SKLQVLDLSGNIACLP 467


>ref|XP_002528571.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223532015|gb|EEF33826.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 571

 Score =  100 bits (249), Expect = 1e-19
 Identities = 63/135 (46%), Positives = 74/135 (54%)
 Frame = -1

Query: 408 ELSLSGLSLSTVPPEVWESDDILKVDLSRNSIQELPKELVSCASLXXXXXXXXXXXXXXX 229
           EL L GL LS VP EVWES +I+KVDLS+NSIQ+LP EL SC SL               
Sbjct: 361 ELFLVGLGLSAVPSEVWESGEIVKVDLSKNSIQKLPVELSSCVSL--------------- 405

Query: 228 XXXXXXXXLVSCASLQALILSGNKIKEWPGSVXXXXXXXXXXXXXXNSLKQIPSDGFGSL 49
                          Q LILS NKI+EWPG++              N L+QIP DGF ++
Sbjct: 406 ---------------QTLILSKNKIQEWPGAILKSLSNLSCLKLDNNPLRQIPLDGFQAV 450

Query: 48  LKLQILDLSGNIASL 4
             LQILDLSGN AS+
Sbjct: 451 SMLQILDLSGNPASV 465


>ref|XP_002316909.1| predicted protein [Populus trichocarpa] gi|222859974|gb|EEE97521.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 63/135 (46%), Positives = 72/135 (53%)
 Frame = -1

Query: 408 ELSLSGLSLSTVPPEVWESDDILKVDLSRNSIQELPKELVSCASLXXXXXXXXXXXXXXX 229
           ELSL GL LS VP EVWES++I+KVDLSRNSIQELP EL                     
Sbjct: 362 ELSLQGLGLSAVPSEVWESNEIVKVDLSRNSIQELPLEL--------------------- 400

Query: 228 XXXXXXXXLVSCASLQALILSGNKIKEWPGSVXXXXXXXXXXXXXXNSLKQIPSDGFGSL 49
                        SL  LILS NKI +WP ++              N+L QIPSDGF ++
Sbjct: 401 -------------SLCCLILSRNKISDWPCAILKSLPNLICLKLDNNALTQIPSDGFQAV 447

Query: 48  LKLQILDLSGNIASL 4
             LQILDLSGN ASL
Sbjct: 448 PMLQILDLSGNPASL 462


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