BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010424
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC81160.1| hypothetical protein OsI_24083 [Oryza sativa Indi...   135   3e-30
gb|AEZ49160.1| polyubiquitin, partial [Wolffia australiana]           134   6e-30
ref|XP_003619702.1| Ubiquitin-like protein [Medicago truncatula]...   134   6e-30
pir||S42643 ubiquitin / ribosomal protein S27a - potato (fragment)    133   1e-29
gb|ABK42077.1| ubiquitin extension protein [Capsicum annuum]          133   1e-29

>gb|EEC81160.1| hypothetical protein OsI_24083 [Oryza sativa Indica Group]
           gi|222636075|gb|EEE66207.1| hypothetical protein
           OsJ_22339 [Oryza sativa Japonica Group]
          Length = 240

 Score =  135 bits (341), Expect = 3e-30
 Identities = 69/76 (90%), Positives = 70/76 (92%)
 Frame = +1

Query: 37  VST*KPHFQSKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ 216
           +S  KPH    MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ
Sbjct: 43  ISGTKPHATPSMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ 102

Query: 217 LEDGRTLADYNIQKES 264
           LEDGRTLADYNIQKES
Sbjct: 103 LEDGRTLADYNIQKES 118



 Score =  122 bits (305), Expect = 4e-26
 Identities = 62/65 (95%), Positives = 62/65 (95%)
 Frame = +1

Query: 70  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 249
           MQIFVKTLTGKTITL VESSD IDNVKAKIQDKEGIPPDQQRLIFA KQLEDGRTLADYN
Sbjct: 130 MQIFVKTLTGKTITLAVESSDKIDNVKAKIQDKEGIPPDQQRLIFADKQLEDGRTLADYN 189

Query: 250 IQKES 264
           IQKES
Sbjct: 190 IQKES 194


>gb|AEZ49160.1| polyubiquitin, partial [Wolffia australiana]
          Length = 281

 Score =  134 bits (338), Expect = 6e-30
 Identities = 68/68 (100%), Positives = 68/68 (100%)
 Frame = +1

Query: 61  QSKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 240
           QSKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA
Sbjct: 18  QSKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 77

Query: 241 DYNIQKES 264
           DYNIQKES
Sbjct: 78  DYNIQKES 85



 Score =  129 bits (324), Expect = 2e-28
 Identities = 65/65 (100%), Positives = 65/65 (100%)
 Frame = +1

Query: 70  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 249
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 97  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 156

Query: 250 IQKES 264
           IQKES
Sbjct: 157 IQKES 161



 Score =  129 bits (324), Expect = 2e-28
 Identities = 65/65 (100%), Positives = 65/65 (100%)
 Frame = +1

Query: 70  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 249
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 173 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 232

Query: 250 IQKES 264
           IQKES
Sbjct: 233 IQKES 237



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/33 (96%), Positives = 32/33 (96%)
 Frame = +1

Query: 70  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK 168
           MQIFVKTLTGKTITLEV SSDTIDNVKAKIQDK
Sbjct: 249 MQIFVKTLTGKTITLEVASSDTIDNVKAKIQDK 281


>ref|XP_003619702.1| Ubiquitin-like protein [Medicago truncatula]
           gi|355494717|gb|AES75920.1| Ubiquitin-like protein
           [Medicago truncatula]
          Length = 245

 Score =  134 bits (338), Expect = 6e-30
 Identities = 68/69 (98%), Positives = 68/69 (98%)
 Frame = +1

Query: 58  FQSKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 237
           FQ KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 48  FQFKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 107

Query: 238 ADYNIQKES 264
           ADYNIQKES
Sbjct: 108 ADYNIQKES 116



 Score =  129 bits (324), Expect = 2e-28
 Identities = 65/65 (100%), Positives = 65/65 (100%)
 Frame = +1

Query: 70  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 249
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 128 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 187

Query: 250 IQKES 264
           IQKES
Sbjct: 188 IQKES 192



 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 37/37 (100%), Positives = 37/37 (100%)
 Frame = +1

Query: 70  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 180
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP
Sbjct: 204 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 240


>pir||S42643 ubiquitin / ribosomal protein S27a - potato (fragment)
          Length = 126

 Score =  133 bits (335), Expect = 1e-29
 Identities = 67/68 (98%), Positives = 68/68 (100%)
 Frame = +1

Query: 61  QSKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 240
           Q+KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA
Sbjct: 43  QAKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 102

Query: 241 DYNIQKES 264
           DYNIQKES
Sbjct: 103 DYNIQKES 110


>gb|ABK42077.1| ubiquitin extension protein [Capsicum annuum]
          Length = 179

 Score =  133 bits (335), Expect = 1e-29
 Identities = 67/68 (98%), Positives = 68/68 (100%)
 Frame = +1

Query: 61  QSKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 240
           Q+KMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA
Sbjct: 21  QTKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 80

Query: 241 DYNIQKES 264
           DYNIQKES
Sbjct: 81  DYNIQKES 88