BLASTX nr result
ID: Coptis23_contig00010415
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00010415
(864 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283650.1| PREDICTED: 30S ribosomal protein S9, chlorop... 290 4e-76
ref|XP_002302464.1| predicted protein [Populus trichocarpa] gi|2... 273 3e-71
ref|XP_002889003.1| hypothetical protein ARALYDRAFT_476636 [Arab... 271 1e-70
ref|NP_177635.1| 30S ribosomal protein S9 [Arabidopsis thaliana]... 271 1e-70
dbj|BAD44402.1| putative ribosomal protein S9 [Arabidopsis thali... 270 2e-70
>ref|XP_002283650.1| PREDICTED: 30S ribosomal protein S9, chloroplastic [Vitis vinifera]
gi|147855629|emb|CAN79164.1| hypothetical protein
VITISV_019246 [Vitis vinifera]
gi|302142422|emb|CBI19625.3| unnamed protein product
[Vitis vinifera]
Length = 209
Score = 290 bits (741), Expect = 4e-76
Identities = 148/171 (86%), Positives = 158/171 (92%)
Frame = -2
Query: 815 SSKNKTPSLSIVATAELSATSLESDALSIEKYVKSRLPGGFAAQTIIGTGRRKCAIARVV 636
S KT SL++VA+A A+ LE + ++KYVKSRLPGGFAAQTIIGTGRRKCAIARVV
Sbjct: 39 SHLTKTSSLAVVASAAAVASPLELETADLKKYVKSRLPGGFAAQTIIGTGRRKCAIARVV 98
Query: 635 LQEGTGKVIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAI 456
LQEGTGKVIINYRDAKEYLQGNPLWLQY+KVPLVTLGYE+SYDVFVKAHGGGLSGQAQAI
Sbjct: 99 LQEGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYESSYDVFVKAHGGGLSGQAQAI 158
Query: 455 SLGIARALLKVSENHRVPLRKEGLLTRDSRVVERKKVGLKKARKAPQFSKR 303
SLGIARALLKVSE+HR PLRKEGLLTRDSRVVERKKVGLKKARKAPQFSKR
Sbjct: 159 SLGIARALLKVSEDHRGPLRKEGLLTRDSRVVERKKVGLKKARKAPQFSKR 209
>ref|XP_002302464.1| predicted protein [Populus trichocarpa] gi|222844190|gb|EEE81737.1|
predicted protein [Populus trichocarpa]
Length = 211
Score = 273 bits (699), Expect = 3e-71
Identities = 140/176 (79%), Positives = 156/176 (88%), Gaps = 1/176 (0%)
Frame = -2
Query: 827 LTKHSSKNKTP-SLSIVATAELSATSLESDALSIEKYVKSRLPGGFAAQTIIGTGRRKCA 651
L+ +S+ NK P +L + AT S E+ ++K VKSRLPGGFAAQ I GTGRRKCA
Sbjct: 40 LSPYSNSNKQPFTLRVTATV----ASPETTTTDLKKLVKSRLPGGFAAQPIHGTGRRKCA 95
Query: 650 IARVVLQEGTGKVIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSG 471
IARVVLQEGTGKVIINYRDAKEYLQGNPLWLQY+KVPLVTLGYE+SYDVFVKAHGGGLSG
Sbjct: 96 IARVVLQEGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYESSYDVFVKAHGGGLSG 155
Query: 470 QAQAISLGIARALLKVSENHRVPLRKEGLLTRDSRVVERKKVGLKKARKAPQFSKR 303
QAQAISLG+ARALLKVS+NHR+PL++EGLLTRDSR+VERKKVGLKKARKAPQFSKR
Sbjct: 156 QAQAISLGVARALLKVSQNHRIPLKREGLLTRDSRIVERKKVGLKKARKAPQFSKR 211
>ref|XP_002889003.1| hypothetical protein ARALYDRAFT_476636 [Arabidopsis lyrata subsp.
lyrata] gi|297334844|gb|EFH65262.1| hypothetical protein
ARALYDRAFT_476636 [Arabidopsis lyrata subsp. lyrata]
Length = 208
Score = 271 bits (694), Expect = 1e-70
Identities = 137/171 (80%), Positives = 153/171 (89%)
Frame = -2
Query: 815 SSKNKTPSLSIVATAELSATSLESDALSIEKYVKSRLPGGFAAQTIIGTGRRKCAIARVV 636
+ ++ SLSI AT ++A E + + ++KYVKSRLPGGFAAQ IIGTGRRKCAIARVV
Sbjct: 40 AKSDRRSSLSITAT--VAAPPEEEEIIELKKYVKSRLPGGFAAQKIIGTGRRKCAIARVV 97
Query: 635 LQEGTGKVIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAI 456
LQEGTGKVIINYRDAKEYLQGNPLWLQY+KVPLVTLGYE SYD+FVKAHGGGLSGQAQAI
Sbjct: 98 LQEGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYENSYDIFVKAHGGGLSGQAQAI 157
Query: 455 SLGIARALLKVSENHRVPLRKEGLLTRDSRVVERKKVGLKKARKAPQFSKR 303
+LG+ARALLKVS +HR PL+KEGLLTRD+RVVERKK GLKKARKAPQFSKR
Sbjct: 158 TLGVARALLKVSADHRSPLKKEGLLTRDARVVERKKAGLKKARKAPQFSKR 208
>ref|NP_177635.1| 30S ribosomal protein S9 [Arabidopsis thaliana]
gi|48428563|sp|Q9XJ27.1|RR9_ARATH RecName: Full=30S
ribosomal protein S9, chloroplastic; Flags: Precursor
gi|5882726|gb|AAD55279.1|AC008263_10 Identical to
gb|AB022676 ribosomal protein S9 from Arabidopsis
thaliana. ESTs gb|T13861, gb|AA389790, gb|T42539,
gb|AA586013, gb|AA395093 and gb|AA041154 come from this
gene [Arabidopsis thaliana]
gi|12744979|gb|AAK06869.1|AF344318_1 putative ribosomal
protein S9 [Arabidopsis thaliana]
gi|5456946|dbj|BAA82396.1| ribosomal protein S9
[Arabidopsis thaliana] gi|15010598|gb|AAK73958.1|
ATg74970/F25A4.6 [Arabidopsis thaliana]
gi|15027999|gb|AAK76530.1| putative ribosomal protein S9
[Arabidopsis thaliana] gi|20259211|gb|AAM14321.1|
putative ribosomal protein S9 [Arabidopsis thaliana]
gi|21554316|gb|AAM63421.1| ribosomal protein S9,
putative [Arabidopsis thaliana]
gi|51968396|dbj|BAD42890.1| putative ribosomal protein
S9 [Arabidopsis thaliana] gi|51969144|dbj|BAD43264.1|
putative ribosomal protein S9 [Arabidopsis thaliana]
gi|51969266|dbj|BAD43325.1| putative ribosomal protein
S9 [Arabidopsis thaliana] gi|51969626|dbj|BAD43505.1|
putative ribosomal protein S9 [Arabidopsis thaliana]
gi|51969796|dbj|BAD43590.1| putative ribosomal protein
S9 [Arabidopsis thaliana] gi|51969932|dbj|BAD43658.1|
putative ribosomal protein S9 [Arabidopsis thaliana]
gi|51970078|dbj|BAD43731.1| putative ribosomal protein
S9 [Arabidopsis thaliana] gi|51970878|dbj|BAD44131.1|
putative ribosomal protein S9 [Arabidopsis thaliana]
gi|51971589|dbj|BAD44459.1| putative ribosomal protein
S9 [Arabidopsis thaliana] gi|51971705|dbj|BAD44517.1|
putative ribosomal protein S9 [Arabidopsis thaliana]
gi|51971713|dbj|BAD44521.1| putative ribosomal protein
S9 [Arabidopsis thaliana] gi|51971743|dbj|BAD44536.1|
putative ribosomal protein S9 [Arabidopsis thaliana]
gi|51971777|dbj|BAD44553.1| putative ribosomal protein
S9 [Arabidopsis thaliana] gi|51971791|dbj|BAD44560.1|
putative ribosomal protein S9 [Arabidopsis thaliana]
gi|51971913|dbj|BAD44621.1| putative ribosomal protein
S9 [Arabidopsis thaliana] gi|332197537|gb|AEE35658.1|
30S ribosomal protein S9 [Arabidopsis thaliana]
Length = 208
Score = 271 bits (694), Expect = 1e-70
Identities = 138/164 (84%), Positives = 150/164 (91%)
Frame = -2
Query: 794 SLSIVATAELSATSLESDALSIEKYVKSRLPGGFAAQTIIGTGRRKCAIARVVLQEGTGK 615
SLSI AT +SA E + + ++KYVKSRLPGGFAAQ IIGTGRRKCAIARVVLQEGTGK
Sbjct: 47 SLSITAT--VSAPPEEEEIVELKKYVKSRLPGGFAAQKIIGTGRRKCAIARVVLQEGTGK 104
Query: 614 VIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAISLGIARA 435
VIINYRDAKEYLQGNPLWLQY+KVPLVTLGYE SYD+FVKAHGGGLSGQAQAI+LG+ARA
Sbjct: 105 VIINYRDAKEYLQGNPLWLQYVKVPLVTLGYENSYDIFVKAHGGGLSGQAQAITLGVARA 164
Query: 434 LLKVSENHRVPLRKEGLLTRDSRVVERKKVGLKKARKAPQFSKR 303
LLKVS +HR PL+KEGLLTRD+RVVERKK GLKKARKAPQFSKR
Sbjct: 165 LLKVSADHRSPLKKEGLLTRDARVVERKKAGLKKARKAPQFSKR 208
>dbj|BAD44402.1| putative ribosomal protein S9 [Arabidopsis thaliana]
Length = 208
Score = 270 bits (691), Expect = 2e-70
Identities = 137/164 (83%), Positives = 150/164 (91%)
Frame = -2
Query: 794 SLSIVATAELSATSLESDALSIEKYVKSRLPGGFAAQTIIGTGRRKCAIARVVLQEGTGK 615
SLSI AT +SA E + + ++KYVKSRLPGGFAAQ IIGTGRRKCAIARVVLQEGTGK
Sbjct: 47 SLSITAT--VSAPPEEEEIVELKKYVKSRLPGGFAAQKIIGTGRRKCAIARVVLQEGTGK 104
Query: 614 VIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAISLGIARA 435
VIINYRDAKEYLQGNPLWLQY+KVPLVTLGYE SYD+F+KAHGGGLSGQAQAI+LG+ARA
Sbjct: 105 VIINYRDAKEYLQGNPLWLQYVKVPLVTLGYENSYDIFMKAHGGGLSGQAQAITLGVARA 164
Query: 434 LLKVSENHRVPLRKEGLLTRDSRVVERKKVGLKKARKAPQFSKR 303
LLKVS +HR PL+KEGLLTRD+RVVERKK GLKKARKAPQFSKR
Sbjct: 165 LLKVSADHRSPLKKEGLLTRDARVVERKKAGLKKARKAPQFSKR 208