BLASTX nr result

ID: Coptis23_contig00010412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010412
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51591.1|AC011665_12 putative menaquinone biosynthesis prot...    57   4e-06
ref|NP_177055.2| 2-oxoglutarate decarboxylase/ hydro-lyase/ magn...    57   4e-06
gb|AAZ40195.1| chloroplast Phyllo [Arabidopsis thaliana]               57   4e-06
gb|AAZ40194.1| truncated PHYLLO protein [Arabidopsis thaliana]         57   4e-06

>gb|AAG51591.1|AC011665_12 putative menaquinone biosynthesis protein [Arabidopsis thaliana]
          Length = 894

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
 Frame = +3

Query: 159 VQPSAKALSWFCSQPQSSGVFLRFYFSKNNLDHPPTDLHSRDGVHGVSGIGAAVQFTGSS 338
           V P AKAL WFCSQP +S VF  F+ SK+ ++     L+ ++  HGV GIG A  F  SS
Sbjct: 122 VPPRAKALFWFCSQPTTSDVFPVFFLSKDTVEPSYKSLYVKE-PHGVFGIGNAFAFVHSS 180

Query: 339 SA-SRVWSLIERFTS 380
           S  S   S+I+ F S
Sbjct: 181 SVDSNGHSMIKTFLS 195


>ref|NP_177055.2| 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding
           protein [Arabidopsis thaliana]
           gi|341941250|sp|Q15KI9.2|PHYLO_ARATH RecName:
           Full=Protein PHYLLO, chloroplastic; Includes: RecName:
           Full=Inactive isochorismate synthase; AltName:
           Full=MENF; Includes: RecName:
           Full=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-
           carboxylate synthase; AltName: Full=MEND; Includes:
           RecName: Full=o-succinylbenzoate synthase; AltName:
           Full=MENC; Includes: RecName:
           Full=2-succinyl-6-hydroxy-2,
           4-cyclohexadiene-1-carboxylate synthase; AltName:
           Full=MENH; Flags: Precursor gi|332196734|gb|AEE34855.1|
           2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion
           binding protein [Arabidopsis thaliana]
          Length = 1715

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
 Frame = +3

Query: 159 VQPSAKALSWFCSQPQSSGVFLRFYFSKNNLDHPPTDLHSRDGVHGVSGIGAAVQFTGSS 338
           V P AKAL WFCSQP +S VF  F+ SK+ ++     L+ ++  HGV GIG A  F  SS
Sbjct: 122 VPPRAKALFWFCSQPTTSDVFPVFFLSKDTVEPSYKSLYVKE-PHGVFGIGNAFAFVHSS 180

Query: 339 SA-SRVWSLIERFTS 380
           S  S   S+I+ F S
Sbjct: 181 SVDSNGHSMIKTFLS 195


>gb|AAZ40195.1| chloroplast Phyllo [Arabidopsis thaliana]
          Length = 1715

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
 Frame = +3

Query: 159 VQPSAKALSWFCSQPQSSGVFLRFYFSKNNLDHPPTDLHSRDGVHGVSGIGAAVQFTGSS 338
           V P AKAL WFCSQP +S VF  F+ SK+ ++     L+ ++  HGV GIG A  F  SS
Sbjct: 122 VPPRAKALFWFCSQPTTSDVFPVFFLSKDTVEPSYKSLYVKE-PHGVFGIGNAFAFVHSS 180

Query: 339 SA-SRVWSLIERFTS 380
           S  S   S+I+ F S
Sbjct: 181 SVDSNGHSMIKTFLS 195


>gb|AAZ40194.1| truncated PHYLLO protein [Arabidopsis thaliana]
          Length = 327

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
 Frame = +3

Query: 159 VQPSAKALSWFCSQPQSSGVFLRFYFSKNNLDHPPTDLHSRDGVHGVSGIGAAVQFTGSS 338
           V P AKAL WFCSQP +S VF  F+ SK+ ++     L+ ++  HGV GIG A  F  SS
Sbjct: 122 VPPRAKALFWFCSQPTTSDVFPVFFLSKDTVEPSYKSLYVKE-PHGVFGIGNAFAFVHSS 180

Query: 339 SA-SRVWSLIERFTS 380
           S  S   S+I+ F S
Sbjct: 181 SVDSNGHSMIKTFLS 195


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