BLASTX nr result

ID: Coptis23_contig00010395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010395
         (957 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277868.1| PREDICTED: uncharacterized protein LOC100244...   180   4e-43
ref|XP_003536964.1| PREDICTED: uncharacterized protein LOC100797...   161   2e-37
ref|XP_003542473.1| PREDICTED: uncharacterized protein LOC100813...   160   5e-37
gb|ACU23715.1| unknown [Glycine max]                                  160   5e-37
ref|XP_002534052.1| chloroplast-targeted copper chaperone, putat...   153   5e-35

>ref|XP_002277868.1| PREDICTED: uncharacterized protein LOC100244737 [Vitis vinifera]
           gi|297741533|emb|CBI32665.3| unnamed protein product
           [Vitis vinifera]
          Length = 270

 Score =  180 bits (457), Expect = 4e-43
 Identities = 117/256 (45%), Positives = 138/256 (53%), Gaps = 16/256 (6%)
 Frame = -2

Query: 899 MKGIDLFCSSPASTAICVSTD----QRSMIRHGGSRAIDRHNPHLRDGRRSRTATTTT-- 738
           MKGID+FC+S ASTAICVS +      S I  GG RAIDRHNP +RD RRS   T TT  
Sbjct: 1   MKGIDIFCASQASTAICVSMEPGSSSSSAIDQGG-RAIDRHNPIIRDARRSSVKTLTTPC 59

Query: 737 -----IN----HLTQLXXXXXXXXXXXPAKPXXXXXXXXXXXXXXXXXXXXXXXKANDLQ 585
                IN    H                 K                         A  + 
Sbjct: 60  SSQSPINPKPYHQLHQKNRKTTGKSNDQIKKASAKNVDQYGKSSAKPLDMLRKSSAKFVD 119

Query: 584 TTSPTGSSRYLLSGTPFLDVLTEFEPLPSSSLVRNESTRFLSVKSDGYPTFQPPXXXXXX 405
             SP GSSRYLLS  PF DVL +F+P+ +   V  +  + +++  D  P  +P       
Sbjct: 120 LISPPGSSRYLLSEPPFFDVLPDFDPVLALVPVEPKKAKAVNLDDDS-PVLKPSSSSGSS 178

Query: 404 XXXXXXXSND-HQVVVLRVSLHCKGCEGKVRKHISKMKGVTSFNIDFAMKKVTVTGDVTP 228
                  S    QVVVLRVSLHCKGCEGK+RKHIS+M+GVTSFNIDFA KKVTV GDVTP
Sbjct: 179 DSKPSSSSGSADQVVVLRVSLHCKGCEGKLRKHISRMEGVTSFNIDFAAKKVTVVGDVTP 238

Query: 227 LGVLTSISRVKNAQFW 180
           LGVL S+S+VK+AQ W
Sbjct: 239 LGVLASVSKVKSAQLW 254


>ref|XP_003536964.1| PREDICTED: uncharacterized protein LOC100797952 [Glycine max]
          Length = 279

 Score =  161 bits (407), Expect = 2e-37
 Identities = 104/265 (39%), Positives = 130/265 (49%), Gaps = 24/265 (9%)
 Frame = -2

Query: 899 MKGIDLFCSSPASTAICVSTDQRSMIRHG----GSRAIDRHNPHLRDGRRSRTATTTTIN 732
           MK ID+FC+S ASTAIC+S +Q S         G R +DRHNP + D RRS + + T   
Sbjct: 1   MKRIDMFCASQASTAICLSMEQASCSSSNSILLGGRTMDRHNPIINDSRRSTSKSLTAPC 60

Query: 731 HLTQLXXXXXXXXXXXPAKPXXXXXXXXXXXXXXXXXXXXXXXKANDLQTTS-------- 576
             +Q             AK                            +  TS        
Sbjct: 61  SSSQSPINPKPYHELHKAKKNSSSKNAAKGHDNHHQKKSTAEKLTEHVTNTSKPVDGIVR 120

Query: 575 ------------PTGSSRYLLSGTPFLDVLTEFEPLPSSSLVRNESTRFLSVKSDGYPTF 432
                       P GS+R LLS T  LD  ++F+P+ + +   N  T  +  + +  P  
Sbjct: 121 RGWLKPPANLITPPGSTRSLLSDTALLDGSSDFDPVLALTTTVNNKTSQVGHQDEANPVS 180

Query: 431 QPPXXXXXXXXXXXXXSNDHQVVVLRVSLHCKGCEGKVRKHISKMKGVTSFNIDFAMKKV 252
           +                +  QVVVLRVSLHCKGCEGKVRKH+S+M+GVTSFNIDFA KKV
Sbjct: 181 K------LSSSSHPKSGSSDQVVVLRVSLHCKGCEGKVRKHLSRMQGVTSFNIDFAAKKV 234

Query: 251 TVTGDVTPLGVLTSISRVKNAQFWP 177
           TV GDVTPL VL SIS+VKNAQ WP
Sbjct: 235 TVVGDVTPLSVLASISKVKNAQLWP 259


>ref|XP_003542473.1| PREDICTED: uncharacterized protein LOC100813295 [Glycine max]
          Length = 276

 Score =  160 bits (404), Expect = 5e-37
 Identities = 104/264 (39%), Positives = 131/264 (49%), Gaps = 23/264 (8%)
 Frame = -2

Query: 899 MKGIDLFCSSPASTAICVSTDQRSMIRHG----GSRAIDRHNPHLRDGRRSRTATTTTIN 732
           MK ID+FC+S ASTAIC+S DQ S         G R IDRHNP + D RRS + + T   
Sbjct: 1   MKRIDIFCASQASTAICLSMDQASCSSSNTILLGGRTIDRHNPIINDSRRSTSKSLTAPC 60

Query: 731 HLTQLXXXXXXXXXXXPAKPXXXXXXXXXXXXXXXXXXXXXXXKANDLQTT--------- 579
             +Q             AK                          +   T+         
Sbjct: 61  SSSQSPINPKPYHELHKAKKNSSSKNATKGHDNQKKRSTAEKLTEHVTNTSKPIDDIVPR 120

Query: 578 ----------SPTGSSRYLLSGTPFLDVLTEFEPLPSSSLVRNESTRFLSVKSDGYPTFQ 429
                     +P GS+R LLS T  LD  ++++P+ + + + N  T     + +  P  +
Sbjct: 121 SWLKPPADLITPPGSTRSLLSDTALLDGSSDYDPVLALTTMINNKTSQAVHQDEANPVSK 180

Query: 428 PPXXXXXXXXXXXXXSNDHQVVVLRVSLHCKGCEGKVRKHISKMKGVTSFNIDFAMKKVT 249
                           +  QVVVLRVSLHCKGCEGKVRKH+S+M+GVTSFNIDFA KKVT
Sbjct: 181 ------LSSSSHPKSGSSDQVVVLRVSLHCKGCEGKVRKHLSRMQGVTSFNIDFASKKVT 234

Query: 248 VTGDVTPLGVLTSISRVKNAQFWP 177
           V GDVTPL VL SIS+VKNAQ WP
Sbjct: 235 VVGDVTPLSVLASISKVKNAQLWP 258


>gb|ACU23715.1| unknown [Glycine max]
          Length = 276

 Score =  160 bits (404), Expect = 5e-37
 Identities = 104/264 (39%), Positives = 131/264 (49%), Gaps = 23/264 (8%)
 Frame = -2

Query: 899 MKGIDLFCSSPASTAICVSTDQRSMIRHG----GSRAIDRHNPHLRDGRRSRTATTTTIN 732
           MK ID+FC+S ASTAIC+S DQ S         G R IDRHNP + D RRS + + T   
Sbjct: 1   MKRIDIFCASQASTAICLSMDQASCSSSNTILLGGRTIDRHNPIINDSRRSTSKSLTAPC 60

Query: 731 HLTQLXXXXXXXXXXXPAKPXXXXXXXXXXXXXXXXXXXXXXXKANDLQTT--------- 579
             +Q             AK                          +   T+         
Sbjct: 61  SSSQSPINPKPYHELHKAKKNSSSKNATKGHDNQKKRSTAEKLTEHVTNTSKPIDDIVPR 120

Query: 578 ----------SPTGSSRYLLSGTPFLDVLTEFEPLPSSSLVRNESTRFLSVKSDGYPTFQ 429
                     +P GS+R LLS T  LD  ++++P+ + + + N  T     + +  P  +
Sbjct: 121 SWLKPPADLITPPGSTRSLLSDTALLDGSSDYDPVLALTTMINNKTSQAVHQDEANPVSK 180

Query: 428 PPXXXXXXXXXXXXXSNDHQVVVLRVSLHCKGCEGKVRKHISKMKGVTSFNIDFAMKKVT 249
                           +  QVVVLRVSLHCKGCEGKVRKH+S+M+GVTSFNIDFA KKVT
Sbjct: 181 ------LSSSFHPKSGSSDQVVVLRVSLHCKGCEGKVRKHLSRMQGVTSFNIDFASKKVT 234

Query: 248 VTGDVTPLGVLTSISRVKNAQFWP 177
           V GDVTPL VL SIS+VKNAQ WP
Sbjct: 235 VVGDVTPLSVLASISKVKNAQLWP 258


>ref|XP_002534052.1| chloroplast-targeted copper chaperone, putative [Ricinus communis]
           gi|223525923|gb|EEF28330.1| chloroplast-targeted copper
           chaperone, putative [Ricinus communis]
          Length = 289

 Score =  153 bits (387), Expect = 5e-35
 Identities = 105/277 (37%), Positives = 138/277 (49%), Gaps = 37/277 (13%)
 Frame = -2

Query: 899 MKGIDLFCSSPASTAICVSTDQ------RSMIRHGGSRAIDRHNPHLRDGRRSR------ 756
           MK  D+FC+S ASTAIC+S DQ       S     G R IDRHNP +RD +R+       
Sbjct: 1   MKRRDMFCASQASTAICMSMDQPSSSSLSSSTAQLGGRNIDRHNPIIRDQKRTPRALPLA 60

Query: 755 --TATTTTIN----HLTQLXXXXXXXXXXXPAKPXXXXXXXXXXXXXXXXXXXXXXXKAN 594
             T+ T  IN    HL +             +K                           
Sbjct: 61  PCTSQTPPINPQPYHLLRRSKTSNTSNVNDQSKKKSSRKQNDLVRKDKKSSSKPDDGNKK 120

Query: 593 DLQTT-------------------SPTGSSRYLLSGTPFLDVLTEFEPLPSSSLVRNEST 471
           D   T                   +P GSSRYLLS   F+D L++++P+   ++V  +S 
Sbjct: 121 DRSATVAKEVVVQRKSWAQPGDFITPPGSSRYLLSDKDFIDGLSDYDPI--LAMVPAQSK 178

Query: 470 RFLSVKSDGYPTFQPPXXXXXXXXXXXXXSNDHQVVVLRVSLHCKGCEGKVRKHISKMKG 291
           RFL+  +      Q                  +QVVVLRVSLHC+GCEGKVRKH+S+M+G
Sbjct: 179 RFLTQAASDQ---QESTSSKTFSMSNSSERPSNQVVVLRVSLHCRGCEGKVRKHLSRMEG 235

Query: 290 VTSFNIDFAMKKVTVTGDVTPLGVLTSISRVKNAQFW 180
           V+SF+IDFA KKVT+ GDV+PLGVL S+S+VK+AQFW
Sbjct: 236 VSSFSIDFAAKKVTIVGDVSPLGVLASVSKVKSAQFW 272


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