BLASTX nr result

ID: Coptis23_contig00010385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010385
         (1028 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280844.1| PREDICTED: transmembrane protein 87B [Vitis ...   507   e-141
ref|XP_003615412.1| Transmembrane protein 87B [Medicago truncatu...   474   e-131
ref|XP_004146433.1| PREDICTED: transmembrane protein 87B-like [C...   467   e-129
ref|XP_004168017.1| PREDICTED: transmembrane protein 87B-like [C...   465   e-129
emb|CAN66485.1| hypothetical protein VITISV_015392 [Vitis vinifera]   457   e-126

>ref|XP_002280844.1| PREDICTED: transmembrane protein 87B [Vitis vinifera]
            gi|297736477|emb|CBI25348.3| unnamed protein product
            [Vitis vinifera]
          Length = 524

 Score =  507 bits (1306), Expect = e-141
 Identities = 249/309 (80%), Positives = 278/309 (89%), Gaps = 2/309 (0%)
 Frame = +2

Query: 2    APLMTFYGFMSLAYLVLGLIWFLQFVRFWKDVPQLHYHITAVIALGMSEMALWYFEYANF 181
            APLMTF GFMSLAYLVLGL+WFLQFV++WKD+  LHYHITAVI LGM EMA WYFEYANF
Sbjct: 216  APLMTFSGFMSLAYLVLGLVWFLQFVQYWKDIIHLHYHITAVIGLGMCEMAFWYFEYANF 275

Query: 182  NSTGSRPMGITIWAVTSSAVKKTVSRLLLLVVSMGYGVVRPTLGGVTSKVLLLGVIYFVA 361
            NSTG+RPMGIT+WAVT SAVKKTVSRLLLLVVSMGYGVVRPTLGG+T KVLLLG +YFVA
Sbjct: 276  NSTGNRPMGITLWAVTFSAVKKTVSRLLLLVVSMGYGVVRPTLGGITPKVLLLGFMYFVA 335

Query: 362  SEALELVEHLGNINDFSGKAKLFLVLPVALLDACFILWIFSSLSKTLEKLQMRRSLAKLE 541
            +EALELVEHLGNINDFSGKAK+FLVLPVALLDACFILWIFSSLSKTLEKLQMRRS+AK+E
Sbjct: 336  TEALELVEHLGNINDFSGKAKVFLVLPVALLDACFILWIFSSLSKTLEKLQMRRSMAKME 395

Query: 542  LYRKFTNSLAISVLVSVAWIGYDLYFNATDPLSELWRRAWIISAFWTVLAYLLLVVICIL 721
            LYRKFTN+LA+SVL+SVAWIGY+LYFNA+DPLSELWRRAWII AFWT+LAY++LVVICIL
Sbjct: 396  LYRKFTNALAVSVLLSVAWIGYELYFNASDPLSELWRRAWIIPAFWTLLAYIILVVICIL 455

Query: 722  WAPSQNPTRYAYXXXXXXXXXXXXISLTSSGMKLPGDI--PVERKERKVPAAAEHVFGLG 895
            WAPS NPTR+AY            +SLT+SG+K+ GD+   +ERKERKV  AA+HV+GLG
Sbjct: 456  WAPSHNPTRFAYLEEAGDDLEEEGVSLTTSGVKVAGDVATKLERKERKVSIAADHVYGLG 515

Query: 896  EDVLEDKRE 922
            ED  EDKRE
Sbjct: 516  EDPEEDKRE 524


>ref|XP_003615412.1| Transmembrane protein 87B [Medicago truncatula]
            gi|355516747|gb|AES98370.1| Transmembrane protein 87B
            [Medicago truncatula]
          Length = 541

 Score =  474 bits (1220), Expect = e-131
 Identities = 236/312 (75%), Positives = 266/312 (85%), Gaps = 6/312 (1%)
 Frame = +2

Query: 5    PLMTFYGFMSLAYLVLGLIWFLQFVRFWKDVPQLHYHITAVIALGMSEMALWYFEYANFN 184
            PLMTFYG MSLAYL LGL+WFL FV++WKDV QLHYHITAVI LGM EMALWYFEYANFN
Sbjct: 230  PLMTFYGLMSLAYLFLGLVWFLWFVKYWKDVIQLHYHITAVIGLGMCEMALWYFEYANFN 289

Query: 185  STGSRPMGITIWAVTSSAVKKTVSRLLLLVVSMGYGVVRPTLGGVTSKVLLLGVIYFVAS 364
            STGSRPM IT+WAVT +AVKKTVSRLLLLVVSMGYGVVRPTLGG+TSKVLLLGV+YFVAS
Sbjct: 290  STGSRPMVITVWAVTFTAVKKTVSRLLLLVVSMGYGVVRPTLGGLTSKVLLLGVVYFVAS 349

Query: 365  EALELVEHLGNINDFSGKAKLFLVLPVALLDACFILWIFSSLSKTLEKLQMRRSLAKLEL 544
            EALELVEHLGNINDFSGK +LFLVLPVALLDACFILWIFSSLSKTLEKLQ+R+S  KLEL
Sbjct: 350  EALELVEHLGNINDFSGKTRLFLVLPVALLDACFILWIFSSLSKTLEKLQIRKSTGKLEL 409

Query: 545  YRKFTNSLAISVLVSVAWIGYDLYFNATDPLSELWRRAWIISAFWTVLAYLLLVVICILW 724
            YRKFTNSLA++VL+SV WIGY+LYFNA+DPL ELWRRAW I AFW +LAY LL+VICILW
Sbjct: 410  YRKFTNSLAVTVLLSVLWIGYELYFNASDPLGELWRRAWAIPAFWILLAYALLIVICILW 469

Query: 725  APSQNPTRYAYXXXXXXXXXXXXISLTSSGMKLPGDIP--VERKERKVP----AAAEHVF 886
            APS+NPTRY+Y            +++  SG+K+ G++   +ERK+RK      A   HVF
Sbjct: 470  APSRNPTRYSYSEETGDDFDEEAVAVVGSGVKMSGEMSTMLERKDRKASSTSLATDHHVF 529

Query: 887  GLGEDVLEDKRE 922
            G+ ED+ EDKRE
Sbjct: 530  GVIEDLEEDKRE 541


>ref|XP_004146433.1| PREDICTED: transmembrane protein 87B-like [Cucumis sativus]
          Length = 539

 Score =  467 bits (1201), Expect = e-129
 Identities = 223/311 (71%), Positives = 270/311 (86%), Gaps = 4/311 (1%)
 Frame = +2

Query: 2    APLMTFYGFMSLAYLVLGLIWFLQFVRFWKDVPQLHYHITAVIALGMSEMALWYFEYANF 181
            AP+MTF+G+MS +YL+LGL+WFL FVR+WKDV QLHYHIT VI LGM EMALWYFEY+NF
Sbjct: 229  APMMTFFGYMSFSYLILGLVWFLWFVRYWKDVMQLHYHITGVIGLGMCEMALWYFEYSNF 288

Query: 182  NSTGSRPMGITIWAVTSSAVKKTVSRLLLLVVSMGYGVVRPTLGGVTSKVLLLGVIYFVA 361
            NS+G+RPMGITIWAVT SA+KKTVSRLLLLVVSMGYGVVRPTLGG+T++V+LLGV+YF+A
Sbjct: 289  NSSGNRPMGITIWAVTFSAIKKTVSRLLLLVVSMGYGVVRPTLGGITTRVILLGVLYFLA 348

Query: 362  SEALELVEHLGNINDFSGKAKLFLVLPVALLDACFILWIFSSLSKTLEKLQMRRSLAKLE 541
            SEALELVEHLGN+NDFSGK + FLVLPVA+LDACFILWIFSSLSKTLEKLQ+R+S+AKLE
Sbjct: 349  SEALELVEHLGNVNDFSGKTRFFLVLPVAVLDACFILWIFSSLSKTLEKLQVRKSMAKLE 408

Query: 542  LYRKFTNSLAISVLVSVAWIGYDLYFNATDPLSELWRRAWIISAFWTVLAYLLLVVICIL 721
            LYRKFTN LA++VLVS+ WIGY+LYFNA DPLSELWRRAWII AFW +L+++LL+++C+L
Sbjct: 409  LYRKFTNCLAVTVLVSIVWIGYELYFNAADPLSELWRRAWIIPAFWVLLSFVLLLIVCVL 468

Query: 722  WAPSQNP-TRYAYXXXXXXXXXXXXISLTSSGMKLPGDI--PVERKERKVPAAAEH-VFG 889
            WAPS NP  R+AY            ++LT +G+K+  D+   +ERKERK P+A++H VF 
Sbjct: 469  WAPSHNPLARFAYSEDTGDDVDEDVVALTGAGIKVAPDLTNKLERKERKAPSASDHTVFS 528

Query: 890  LGEDVLEDKRE 922
             G D+ EDKRE
Sbjct: 529  HGGDLEEDKRE 539


>ref|XP_004168017.1| PREDICTED: transmembrane protein 87B-like [Cucumis sativus]
          Length = 539

 Score =  465 bits (1197), Expect = e-129
 Identities = 222/311 (71%), Positives = 270/311 (86%), Gaps = 4/311 (1%)
 Frame = +2

Query: 2    APLMTFYGFMSLAYLVLGLIWFLQFVRFWKDVPQLHYHITAVIALGMSEMALWYFEYANF 181
            AP+MTF+G+MS +YL+LGL+WFL FVR+WKDV QLHYHIT VI LGM EMALWYFEY+NF
Sbjct: 229  APMMTFFGYMSFSYLILGLVWFLWFVRYWKDVMQLHYHITGVIGLGMCEMALWYFEYSNF 288

Query: 182  NSTGSRPMGITIWAVTSSAVKKTVSRLLLLVVSMGYGVVRPTLGGVTSKVLLLGVIYFVA 361
            NS+G+RPMGITIWAVT SA+KKTVSRLLLLVVSMGYGVVRPTLGG+T++V+LLGV+YF+A
Sbjct: 289  NSSGNRPMGITIWAVTFSAIKKTVSRLLLLVVSMGYGVVRPTLGGITTRVILLGVLYFLA 348

Query: 362  SEALELVEHLGNINDFSGKAKLFLVLPVALLDACFILWIFSSLSKTLEKLQMRRSLAKLE 541
            SEALELVEHLGN+NDFSGK + FLVLPVA+LDACFILWIFSSLSKTLEKLQ+R+S+AKLE
Sbjct: 349  SEALELVEHLGNVNDFSGKTRFFLVLPVAVLDACFILWIFSSLSKTLEKLQVRKSMAKLE 408

Query: 542  LYRKFTNSLAISVLVSVAWIGYDLYFNATDPLSELWRRAWIISAFWTVLAYLLLVVICIL 721
            LYRKFTN LA++VLVS+ WIGY+LYFNA DPLSELW+RAWII AFW +L+++LL+++C+L
Sbjct: 409  LYRKFTNCLAVTVLVSIVWIGYELYFNAADPLSELWQRAWIIPAFWVLLSFVLLLIVCVL 468

Query: 722  WAPSQNP-TRYAYXXXXXXXXXXXXISLTSSGMKLPGDI--PVERKERKVPAAAEH-VFG 889
            WAPS NP  R+AY            ++LT +G+K+  D+   +ERKERK P+A++H VF 
Sbjct: 469  WAPSHNPLARFAYSEDTGDDVDEDVVALTGAGIKVAPDLTNKLERKERKAPSASDHTVFS 528

Query: 890  LGEDVLEDKRE 922
             G D+ EDKRE
Sbjct: 529  HGGDLEEDKRE 539


>emb|CAN66485.1| hypothetical protein VITISV_015392 [Vitis vinifera]
          Length = 520

 Score =  457 bits (1177), Expect = e-126
 Identities = 228/307 (74%), Positives = 261/307 (85%)
 Frame = +2

Query: 2    APLMTFYGFMSLAYLVLGLIWFLQFVRFWKDVPQLHYHITAVIALGMSEMALWYFEYANF 181
            APLMTF+GFMSLAYL LGL+WFL+FV+FWKD+ QLHYHI+AVIALGM E+ALWYFEYANF
Sbjct: 217  APLMTFFGFMSLAYLALGLVWFLRFVKFWKDIIQLHYHISAVIALGMCEVALWYFEYANF 276

Query: 182  NSTGSRPMGITIWAVTSSAVKKTVSRLLLLVVSMGYGVVRPTLGGVTSKVLLLGVIYFVA 361
            NSTGSRP+G+T+WAV+ +AVKKTVSRLLLLVVSMGYGVVRPTLGG+TSKVLLLG+IYFVA
Sbjct: 277  NSTGSRPVGVTLWAVSFTAVKKTVSRLLLLVVSMGYGVVRPTLGGITSKVLLLGLIYFVA 336

Query: 362  SEALELVEHLGNINDFSGKAKLFLVLPVALLDACFILWIFSSLSKTLEKLQMRRSLAKLE 541
            SEAL LVEHL +INDFS K KL LVLPV  LDACFILWIFSSLS TLEKLQMRRS+AKLE
Sbjct: 337  SEALGLVEHLRSINDFSDKTKLILVLPVTFLDACFILWIFSSLSITLEKLQMRRSMAKLE 396

Query: 542  LYRKFTNSLAISVLVSVAWIGYDLYFNATDPLSELWRRAWIISAFWTVLAYLLLVVICIL 721
            LYRKFTNSLA+SV++S+AWIGY+LYFNA+DP SE W  AWII AFW +L++ LL+VICIL
Sbjct: 397  LYRKFTNSLAVSVVLSIAWIGYELYFNASDPSSEPWEIAWIIPAFWNLLSFALLIVICIL 456

Query: 722  WAPSQNPTRYAYXXXXXXXXXXXXISLTSSGMKLPGDIPVERKERKVPAAAEHVFGLGED 901
            WAP++NPTRYA             +SLTSS   +P    VERKER    A +HV GLG+D
Sbjct: 457  WAPTRNPTRYAXSEETGSDFDEEGVSLTSSVANIPD--MVERKERMASTATDHVLGLGDD 514

Query: 902  VLEDKRE 922
             LEDK+E
Sbjct: 515  -LEDKQE 520


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