BLASTX nr result

ID: Coptis23_contig00010384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010384
         (1990 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263877.2| PREDICTED: medium-chain-fatty-acid--CoA liga...   856   0.0  
ref|XP_002263801.1| PREDICTED: putative acyl-CoA synthetase YngI...   856   0.0  
ref|XP_002521743.1| AMP dependent ligase, putative [Ricinus comm...   847   0.0  
emb|CAN64147.1| hypothetical protein VITISV_042774 [Vitis vinifera]   843   0.0  
ref|XP_002329170.1| acyl:coa ligase acetate-coa synthetase-like ...   833   0.0  

>ref|XP_002263877.2| PREDICTED: medium-chain-fatty-acid--CoA ligase [Vitis vinifera]
          Length = 588

 Score =  856 bits (2211), Expect = 0.0
 Identities = 412/558 (73%), Positives = 480/558 (86%), Gaps = 2/558 (0%)
 Frame = -2

Query: 1740 ERTGNLSMDQLKPRPANSCPLTPLGFLERAATVYADCNSIIYNSTTYTWSQTYRRCLQLA 1561
            +R  + +M++LKPRPANS PLT L FL+RAATVY DC S++YNSTTYTWSQT+ RCLQ+A
Sbjct: 33   KREDSENMEELKPRPANSSPLTTLSFLDRAATVYGDCPSVVYNSTTYTWSQTHHRCLQVA 92

Query: 1560 SSIASLGIKPGNVVSVIAPNIPAMYELHFAIPMSGAILNSINTRLDARTISVLLRHSEAK 1381
            SSI SLGI  G VVSV+APNIPAMYELHFA+PM+GA+LN+INTRLDA+T+SVLLRHSE+K
Sbjct: 93   SSIKSLGIGRGQVVSVVAPNIPAMYELHFAVPMAGAVLNTINTRLDAKTVSVLLRHSESK 152

Query: 1380 LIFVDHFSRSLVFEALSLFPQESQFPILVFINTDAETDAETVSPAADLDYESLIEKGDAE 1201
            LIFVD+ SR L+ E+LSLFP  SQ P+LV I  D ++   TV       YE ++ +GD E
Sbjct: 153  LIFVDYQSRPLILESLSLFPPSSQRPLLVLITDDEDSPPSTVDFLCT--YEDMVGRGDPE 210

Query: 1200 FKWIQPQNEWTPIVLNYTSGTTSSPKGVVHSHRGEFIVALDSLIEWSVPKQPVYLWTLPM 1021
            FKWI+P++EW P++LNYTSGTTSSPKGVVH HRG FIV +DSLI+W VPKQPVYLWTLPM
Sbjct: 211  FKWIRPESEWNPMILNYTSGTTSSPKGVVHCHRGIFIVTVDSLIDWCVPKQPVYLWTLPM 270

Query: 1020 FHANGWTYTWGMAAVGGTNVCLRKFDAAIIYSEIRRHGVTHMCGAPVVLNMLANIPNPEP 841
            FHANGW++ WGMAAVGGTNVCLRKFDA++IY  IR H VTHMCGAPVVLNML+N P  EP
Sbjct: 271  FHANGWSFPWGMAAVGGTNVCLRKFDASVIYEAIRVHRVTHMCGAPVVLNMLSNWPGTEP 330

Query: 840  LPHPIHILTAGAPPPAAVLLRTESLGFIVAHGYGLTETGGLIVTCSWKHKWNRFPASQRA 661
            L +P+ ILTAGAPPPAA+LLRTES GFIV+HGYGLTETGGL+V+C WK KWNR PA++RA
Sbjct: 331  LKNPVQILTAGAPPPAAILLRTESRGFIVSHGYGLTETGGLVVSCVWKQKWNRLPATERA 390

Query: 660  KLKARQGVRVIGLAEMDVVDSESGLSVKRDGLSLGEVVLRGACIMLGYLKDPVGTEKCM- 484
            +LK+RQGVR +G+ E+DV+D  SGLSVKRDG SLGE+VLRG CIMLGYLKDP GT K + 
Sbjct: 391  RLKSRQGVRTVGMTEVDVLDPGSGLSVKRDGSSLGEIVLRGGCIMLGYLKDPKGTSKSLT 450

Query: 483  KDGWFYTGDVGVMHPDGYLEIKDRSKDVIISGGENLSSVELESVLYTHPAIYEAAVVARP 304
             DGWF+TGDVGVMH DGYLEIKDRSKDVIISGGENLSSVE+ESVLYTHPA+ EAAVVARP
Sbjct: 451  DDGWFFTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYTHPAVNEAAVVARP 510

Query: 303  DEYWGETPCAFVSLKSD-SNKLTEKEVMEFCRARMPHYMVPKTVICLGELPKTSTGKIKK 127
            D++WGETPCAFVSLK + + + TEKE+ME+CRARMPHYMVPKTV+   ELPKTSTGKI+K
Sbjct: 511  DDFWGETPCAFVSLKPERTEQPTEKEIMEYCRARMPHYMVPKTVVFEEELPKTSTGKIQK 570

Query: 126  FVLRERANALGPSRVSRM 73
            FVLRE A A+G SRVSRM
Sbjct: 571  FVLRETAKAMGSSRVSRM 588


>ref|XP_002263801.1| PREDICTED: putative acyl-CoA synthetase YngI-like [Vitis vinifera]
          Length = 549

 Score =  856 bits (2211), Expect = 0.0
 Identities = 409/555 (73%), Positives = 482/555 (86%), Gaps = 6/555 (1%)
 Frame = -2

Query: 1719 MDQLKPRPANSCPLTPLGFLERAATVYADCNSIIYNSTTYTWSQTYRRCLQLASSIASLG 1540
            MD LKPRPANS PLTPLGFL+RAATVY DC S++YNS TYTWSQT+RRCLQ+ASSI S G
Sbjct: 1    MDSLKPRPANSSPLTPLGFLDRAATVYGDCPSVLYNSITYTWSQTHRRCLQVASSIKSFG 60

Query: 1539 IKPGNVVSVIAPNIPAMYELHFAIPMSGAILNSINTRLDARTISVLLRHSEAKLIFVDHF 1360
            I  G+VVSV+APN+PAMYELHFA+PMSGA+LN+INTRLDART+SVLLRHSE+KL+FVD  
Sbjct: 61   IGRGHVVSVVAPNVPAMYELHFAVPMSGAVLNTINTRLDARTVSVLLRHSESKLVFVDCL 120

Query: 1359 SRSLVFEALSLFPQESQFPILVFINTDAETDAETVSPAADLD----YESLIEKGDAEFKW 1192
            SR+L+ EALSLFP  +Q+P+LV I        E V+P++ +D    YE L+E+GD EFKW
Sbjct: 121  SRALILEALSLFPPNTQWPLLVLIAD------EEVAPSSTVDFICTYEDLVERGDPEFKW 174

Query: 1191 IQPQNEWTPIVLNYTSGTTSSPKGVVHSHRGEFIVALDSLIEWSVPKQPVYLWTLPMFHA 1012
            ++P++EW PI+LNYTSGTTSSPKGVVH HRG FIV +DSL+EWSVPKQPVYLWTLPMFH 
Sbjct: 175  VRPESEWDPIILNYTSGTTSSPKGVVHCHRGIFIVTIDSLVEWSVPKQPVYLWTLPMFHG 234

Query: 1011 NGWTYTWGMAAVGGTNVCLRKFDAAIIYSEIRRHGVTHMCGAPVVLNMLANIPNPEPLPH 832
            NGWT+TWGMAA+GGTNVCLRKFDA IIY  I ++G+THMC APVVLNML+N PN +PL  
Sbjct: 235  NGWTFTWGMAAIGGTNVCLRKFDARIIYDAIPKYGITHMCAAPVVLNMLSNYPNHQPLGD 294

Query: 831  PIHILTAGAPPPAAVLLRTESLGFIVAHGYGLTETGGLIVTCSWKHKWNRFPASQRAKLK 652
            P+ ILTAGAPPP +VLLRTESLGF+V+HGYG+TET G++V+C+WK +W+RFPAS+RA++K
Sbjct: 295  PVKILTAGAPPPYSVLLRTESLGFVVSHGYGMTETAGVVVSCAWKPQWDRFPASERARVK 354

Query: 651  ARQGVRVIGLAEMDVVDSESGLSVKRDGLSLGEVVLRGACIMLGYLKDPVGTEKCM-KDG 475
            ARQGVR + + E+DVVD +SG+SVKRDG SLGE+VLRGACIMLGYLKDP GT KCM K+G
Sbjct: 355  ARQGVRTVVMTEVDVVDPKSGVSVKRDGSSLGEIVLRGACIMLGYLKDPEGTSKCMSKEG 414

Query: 474  WFYTGDVGVMHPDGYLEIKDRSKDVIISGGENLSSVELESVLYTHPAIYEAAVVARPDEY 295
            W YTGDV VMHPDGY+EIKDRSKDVIISGGENLSSVE+ESVLYTHPA+ EAAVVARPD++
Sbjct: 415  WLYTGDVAVMHPDGYIEIKDRSKDVIISGGENLSSVEVESVLYTHPAVNEAAVVARPDDF 474

Query: 294  WGETPCAFVSLKSDS-NKLTEKEVMEFCRARMPHYMVPKTVICLGELPKTSTGKIKKFVL 118
            WGETPCAFVSLK +S +K T KE+ME+CRARMPHYMVPKTV+   ELPKTSTGKI+KF L
Sbjct: 475  WGETPCAFVSLKPESPDKPTAKEMMEYCRARMPHYMVPKTVVFKEELPKTSTGKIQKFKL 534

Query: 117  RERANALGPSRVSRM 73
            R+ A A+G S  SRM
Sbjct: 535  RDIAKAMGCSPASRM 549


>ref|XP_002521743.1| AMP dependent ligase, putative [Ricinus communis]
            gi|223538956|gb|EEF40553.1| AMP dependent ligase,
            putative [Ricinus communis]
          Length = 556

 Score =  847 bits (2187), Expect = 0.0
 Identities = 400/556 (71%), Positives = 479/556 (86%), Gaps = 7/556 (1%)
 Frame = -2

Query: 1719 MDQLKPRPANSCPLTPLGFLERAATVYADCNSIIYNSTTYTWSQTYRRCLQLASSIASLG 1540
            MD LKP+PANS PLTPL FLERA+TVY DC SI+YN+ TYTWSQT+RRCLQLASS++S G
Sbjct: 1    MDHLKPKPANSFPLTPLSFLERASTVYGDCPSIVYNTATYTWSQTHRRCLQLASSLSSGG 60

Query: 1539 IKPGNVVSVIAPNIPAMYELHFAIPMSGAILNSINTRLDARTISVLLRHSEAKLIFVDHF 1360
               G+VVSV+APN P MYEL FA+PMSGA+LN+INTRLDART+SVLLRHS++KL+FVD  
Sbjct: 61   FTRGDVVSVVAPNTPPMYELQFAVPMSGAVLNNINTRLDARTVSVLLRHSQSKLVFVDCL 120

Query: 1359 SRSLVFEALSLFPQESQFPILVFINTDAETDAET-VSPAADLD----YESLIEKGDAEFK 1195
            SR LV EA+SLFP   + P LV I  D E  A +  S ++ +D    YES++EKGD EFK
Sbjct: 121  SRDLVLEAVSLFPSSVKRPTLVLITDDDEAPASSSTSSSSTVDFCCTYESMVEKGDPEFK 180

Query: 1194 WIQPQNEWTPIVLNYTSGTTSSPKGVVHSHRGEFIVALDSLIEWSVPKQPVYLWTLPMFH 1015
            W+QPQ+EW P++LNYTSGTTSSPKGVVH HRG +I+ ++SLI+W+VP+QPVYLWTLP+FH
Sbjct: 181  WVQPQSEWDPMILNYTSGTTSSPKGVVHCHRGIYIITVESLIDWNVPRQPVYLWTLPLFH 240

Query: 1014 ANGWTYTWGMAAVGGTNVCLRKFDAAIIYSEIRRHGVTHMCGAPVVLNMLANIPNPEPLP 835
            ANGW++ WGMAAVGGTN+C+RKFDA+ IY  I+RHGVTHMCGAPVVLNML N P+ EPL 
Sbjct: 241  ANGWSFPWGMAAVGGTNICIRKFDASSIYGLIKRHGVTHMCGAPVVLNMLTNSPDNEPLK 300

Query: 834  HPIHILTAGAPPPAAVLLRTESLGFIVAHGYGLTETGGLIVTCSWKHKWNRFPASQRAKL 655
             P+HILTAGAPPPAAVL RTESLGF+V+HGYGLTET GL+V+C+WK KWN  PAS+RA+L
Sbjct: 301  RPVHILTAGAPPPAAVLFRTESLGFVVSHGYGLTETAGLVVSCAWKPKWNTVPASERARL 360

Query: 654  KARQGVRVIGLAEMDVVDSESGLSVKRDGLSLGEVVLRGACIMLGYLKDPVGTEKCMK-D 478
            KARQGVR+ G  E+DV+D ++GLSVKRDGLSLGE+VLRG C+M+GYLKDP GT KC+K D
Sbjct: 361  KARQGVRIAGFTEIDVIDPKTGLSVKRDGLSLGEIVLRGGCVMMGYLKDPDGTSKCLKDD 420

Query: 477  GWFYTGDVGVMHPDGYLEIKDRSKDVIISGGENLSSVELESVLYTHPAIYEAAVVARPDE 298
            GWFYTGDVGVMHPDGYLEIKDRSKDVIISGGEN+SSVE+ESVLY++P + EAAVVARPDE
Sbjct: 421  GWFYTGDVGVMHPDGYLEIKDRSKDVIISGGENISSVEVESVLYSNPVVNEAAVVARPDE 480

Query: 297  YWGETPCAFVSLKSDS-NKLTEKEVMEFCRARMPHYMVPKTVICLGELPKTSTGKIKKFV 121
            YWGETPCAFVSL+  +  K++EK+++E+CR +MPHYMVPKTV+   ELPKTSTGKI+KFV
Sbjct: 481  YWGETPCAFVSLRDGAREKVSEKDIIEYCREKMPHYMVPKTVVFKEELPKTSTGKIQKFV 540

Query: 120  LRERANALGPSRVSRM 73
            LR+ A A+G S+VSRM
Sbjct: 541  LRDIAKAMGASKVSRM 556


>emb|CAN64147.1| hypothetical protein VITISV_042774 [Vitis vinifera]
          Length = 537

 Score =  843 bits (2177), Expect = 0.0
 Identities = 405/551 (73%), Positives = 475/551 (86%), Gaps = 2/551 (0%)
 Frame = -2

Query: 1719 MDQLKPRPANSCPLTPLGFLERAATVYADCNSIIYNSTTYTWSQTYRRCLQLASSIASLG 1540
            MD LKPRPANS PLTPLGFL+RAATVY DC S++YNS TYTWSQT+RRCLQ+ASSI S G
Sbjct: 1    MDSLKPRPANSSPLTPLGFLDRAATVYGDCPSVLYNSITYTWSQTHRRCLQVASSIKSFG 60

Query: 1539 IKPGNVVSVIAPNIPAMYELHFAIPMSGAILNSINTRLDARTISVLLRHSEAKLIFVDHF 1360
            I  G+VVSV+APN+PAMYELHFA+PMSGA+LN+INTRLDART+SVLLRHSE+KL+FVD  
Sbjct: 61   IGRGHVVSVVAPNVPAMYELHFAVPMSGAVLNTINTRLDARTVSVLLRHSESKLVFVDCL 120

Query: 1359 SRSLVFEALSLFPQESQFPILVFINTDAETDAETVSPAADLDYESLIEKGDAEFKWIQPQ 1180
            SR+L+ EALSLFP  +Q+P+LV I        E V+P++         +GD EFKW++P+
Sbjct: 121  SRALILEALSLFPPNTQWPLLVLIAD------EEVAPSST--------RGDPEFKWVRPE 166

Query: 1179 NEWTPIVLNYTSGTTSSPKGVVHSHRGEFIVALDSLIEWSVPKQPVYLWTLPMFHANGWT 1000
            +EW PI+LNYTSGTTSSPKGVVH HRG FIV +DSL+EWSVPKQPVYLWTLPMFH NGWT
Sbjct: 167  SEWDPIILNYTSGTTSSPKGVVHCHRGIFIVTIDSLVEWSVPKQPVYLWTLPMFHGNGWT 226

Query: 999  YTWGMAAVGGTNVCLRKFDAAIIYSEIRRHGVTHMCGAPVVLNMLANIPNPEPLPHPIHI 820
            +TWGMAAVGGTNVCLRKFDA IIY  I ++G+THMC APVVLNML+N PN +PL +P+ I
Sbjct: 227  FTWGMAAVGGTNVCLRKFDARIIYDAIPKYGITHMCAAPVVLNMLSNYPNHQPLGYPVKI 286

Query: 819  LTAGAPPPAAVLLRTESLGFIVAHGYGLTETGGLIVTCSWKHKWNRFPASQRAKLKARQG 640
            LTAGAPPP +VLLRTESLGF+V+HGYG+TET G++V+C+WK +W+RFPAS+RA++KARQG
Sbjct: 287  LTAGAPPPYSVLLRTESLGFVVSHGYGMTETAGVVVSCAWKPQWDRFPASERARVKARQG 346

Query: 639  VRVIGLAEMDVVDSESGLSVKRDGLSLGEVVLRGACIMLGYLKDPVGTEKCM-KDGWFYT 463
            VR + + E+DVVD +SG+SVKRDG SLGE+VLRGACIMLGYLKDP GT KCM K+GW YT
Sbjct: 347  VRTVVMTEVDVVDPKSGVSVKRDGSSLGEIVLRGACIMLGYLKDPEGTSKCMSKEGWLYT 406

Query: 462  GDVGVMHPDGYLEIKDRSKDVIISGGENLSSVELESVLYTHPAIYEAAVVARPDEYWGET 283
            GDV VMHPDGY+EIKDRSKDVIISGGENLSSVE+ESVLYTHPA+ EAAVVARPD++WGET
Sbjct: 407  GDVAVMHPDGYIEIKDRSKDVIISGGENLSSVEVESVLYTHPAVNEAAVVARPDDFWGET 466

Query: 282  PCAFVSLKSDS-NKLTEKEVMEFCRARMPHYMVPKTVICLGELPKTSTGKIKKFVLRERA 106
            PCAFVSLK  S +K T KE+ME+CRARMPHYMVPKTV+   ELPKTSTGKI+KF LR+ A
Sbjct: 467  PCAFVSLKPGSPDKPTAKEMMEYCRARMPHYMVPKTVVFKEELPKTSTGKIQKFKLRDIA 526

Query: 105  NALGPSRVSRM 73
             A+G S  SRM
Sbjct: 527  KAMGCSPASRM 537


>ref|XP_002329170.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
            trichocarpa] gi|222870951|gb|EEF08082.1| acyl:coa ligase
            acetate-coa synthetase-like protein [Populus trichocarpa]
          Length = 550

 Score =  833 bits (2152), Expect = 0.0
 Identities = 393/550 (71%), Positives = 466/550 (84%), Gaps = 1/550 (0%)
 Frame = -2

Query: 1719 MDQLKPRPANSCPLTPLGFLERAATVYADCNSIIYNSTTYTWSQTYRRCLQLASSIASLG 1540
            M++LKP PA+  PLTPL FLER ATVY DC S+IYN++TYTWSQT+RRCLQ+ASS++S G
Sbjct: 1    MEELKPTPASLSPLTPLAFLERTATVYGDCPSVIYNNSTYTWSQTHRRCLQVASSLSSYG 60

Query: 1539 IKPGNVVSVIAPNIPAMYELHFAIPMSGAILNSINTRLDARTISVLLRHSEAKLIFVDHF 1360
            IKPG+VVSV+APNIPAMYEL FA+PMSGAILN+INTRLDART+S+LLRHSE+KL+FVD  
Sbjct: 61   IKPGHVVSVVAPNIPAMYELQFAVPMSGAILNNINTRLDARTMSILLRHSESKLVFVDCL 120

Query: 1359 SRSLVFEALSLFPQESQFPILVFINTDAETDAETVSPAADLDYESLIEKGDAEFKWIQPQ 1180
            SR ++ +A+SL P  ++ P LV I  DAE    +++      YES++EKGD  FKW+QP 
Sbjct: 121  SRDVILDAMSLLPPNTKRPPLVLIADDAEAAESSITDDFCCAYESMVEKGDPGFKWVQPH 180

Query: 1179 NEWTPIVLNYTSGTTSSPKGVVHSHRGEFIVALDSLIEWSVPKQPVYLWTLPMFHANGWT 1000
            +EW P+VLNYTSGTTSSPKGVVH HR  F + + SLI+W VPKQPVYLWTLP+FHANGW+
Sbjct: 181  SEWDPMVLNYTSGTTSSPKGVVHCHRSVFTITVGSLIDWGVPKQPVYLWTLPIFHANGWS 240

Query: 999  YTWGMAAVGGTNVCLRKFDAAIIYSEIRRHGVTHMCGAPVVLNMLANIPNPEPLPHPIHI 820
            Y WG+AAVGGTN+CLRKFD   IYS I+RHGVTHMCGAPVVL ML N  N EPL +PI I
Sbjct: 241  YPWGIAAVGGTNICLRKFDGPTIYSLIKRHGVTHMCGAPVVLTMLTNSTNKEPLRNPIQI 300

Query: 819  LTAGAPPPAAVLLRTESLGFIVAHGYGLTETGGLIVTCSWKHKWNRFPASQRAKLKARQG 640
            LTAGAPPP+AVL RTESLGF+V+HGYGLTET GL+V+C+WK KWN FP S+RA+LKARQG
Sbjct: 301  LTAGAPPPSAVLFRTESLGFVVSHGYGLTETAGLVVSCAWKPKWNTFPPSERARLKARQG 360

Query: 639  VRVIGLAEMDVVDSESGLSVKRDGLSLGEVVLRGACIMLGYLKDPVGTEKCMKDGWFYTG 460
            V+++G  E+DV++ ESG SVKRDG++LGEVVL+G CIMLGYLKDP GT KCMKDGWFYTG
Sbjct: 361  VKIVGFTEIDVLEPESGKSVKRDGVALGEVVLKGGCIMLGYLKDPTGTSKCMKDGWFYTG 420

Query: 459  DVGVMHPDGYLEIKDRSKDVIISGGENLSSVELESVLYTHPAIYEAAVVARPDEYWGETP 280
            DVGVMH DGYLEIKDRSKDVIISGGEN+SSVE+ESVLYTHPA+ EAAVVARPDE+WGETP
Sbjct: 421  DVGVMHQDGYLEIKDRSKDVIISGGENISSVEIESVLYTHPAVNEAAVVARPDEFWGETP 480

Query: 279  CAFVSLKSD-SNKLTEKEVMEFCRARMPHYMVPKTVICLGELPKTSTGKIKKFVLRERAN 103
            CAFV LK   + K  EK++++FCR +MPHYMVPKTV+   ELPKTSTGKI+KFVLR  A 
Sbjct: 481  CAFVGLKDGLTQKPGEKDMIDFCREKMPHYMVPKTVVFKDELPKTSTGKIQKFVLRGIAK 540

Query: 102  ALGPSRVSRM 73
            ++G S+ SRM
Sbjct: 541  SMGSSKGSRM 550


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