BLASTX nr result
ID: Coptis23_contig00010379
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00010379
(807 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264075.1| PREDICTED: WPP domain-associated protein-lik... 73 2e-13
emb|CBI31022.3| unnamed protein product [Vitis vinifera] 73 2e-13
emb|CAN64468.1| hypothetical protein VITISV_036942 [Vitis vinifera] 64 1e-10
ref|XP_002330600.1| predicted protein [Populus trichocarpa] gi|2... 60 7e-07
ref|XP_002523187.1| Early endosome antigen, putative [Ricinus co... 58 8e-07
>ref|XP_002264075.1| PREDICTED: WPP domain-associated protein-like [Vitis vinifera]
Length = 902
Score = 73.2 bits (178), Expect(2) = 2e-13
Identities = 52/166 (31%), Positives = 84/166 (50%), Gaps = 22/166 (13%)
Frame = -2
Query: 623 RWGIEDSCMESVIMQEICGTIFKEAA*DAERRLYLMKMKYEGQSERLVSLEASVLESEKA 444
++ IEDS ME +IMQ + I++E DAE +L +M +KY+ +E VS+E V+E EKA
Sbjct: 575 KYEIEDSDMEFIIMQGLSAIIYREVMKDAEAKLNIMNVKYDCANEARVSIEIKVVEKEKA 634
Query: 443 LNXXXXXXXXXXXXXXKISALLEEK-----ECADQIY----------QDLSSFKDQAIQQ 309
L + A LEEK E AD + Q+L++ ++ QQ
Sbjct: 635 LRLEFDEKERLKQEIILLEASLEEKERSALEIADALVKEKEQFELASQELNNLREHTNQQ 694
Query: 308 EKLVS-------VINSKFEETLGQTHLYEDKIAKLEKTLKLTIEDL 192
+KL+S + E L Q L + +I +L++ L++T ++L
Sbjct: 695 QKLISESSREADITKGNLVEALEQIDLQKVEICELKQKLEITRKEL 740
Score = 28.5 bits (62), Expect(2) = 2e-13
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -1
Query: 198 RFKENALSLVVARESGQKKQVESLSTYV 115
R +NALSLV ARE KQ+ES+ ++
Sbjct: 755 RETQNALSLVEAREREHSKQMESIIVFM 782
>emb|CBI31022.3| unnamed protein product [Vitis vinifera]
Length = 807
Score = 73.2 bits (178), Expect(2) = 2e-13
Identities = 52/166 (31%), Positives = 84/166 (50%), Gaps = 22/166 (13%)
Frame = -2
Query: 623 RWGIEDSCMESVIMQEICGTIFKEAA*DAERRLYLMKMKYEGQSERLVSLEASVLESEKA 444
++ IEDS ME +IMQ + I++E DAE +L +M +KY+ +E VS+E V+E EKA
Sbjct: 480 KYEIEDSDMEFIIMQGLSAIIYREVMKDAEAKLNIMNVKYDCANEARVSIEIKVVEKEKA 539
Query: 443 LNXXXXXXXXXXXXXXKISALLEEK-----ECADQIY----------QDLSSFKDQAIQQ 309
L + A LEEK E AD + Q+L++ ++ QQ
Sbjct: 540 LRLEFDEKERLKQEIILLEASLEEKERSALEIADALVKEKEQFELASQELNNLREHTNQQ 599
Query: 308 EKLVS-------VINSKFEETLGQTHLYEDKIAKLEKTLKLTIEDL 192
+KL+S + E L Q L + +I +L++ L++T ++L
Sbjct: 600 QKLISESSREADITKGNLVEALEQIDLQKVEICELKQKLEITRKEL 645
Score = 28.5 bits (62), Expect(2) = 2e-13
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -1
Query: 198 RFKENALSLVVARESGQKKQVESLSTYV 115
R +NALSLV ARE KQ+ES+ ++
Sbjct: 660 RETQNALSLVEAREREHSKQMESIIVFM 687
>emb|CAN64468.1| hypothetical protein VITISV_036942 [Vitis vinifera]
Length = 1539
Score = 63.9 bits (154), Expect(2) = 1e-10
Identities = 52/173 (30%), Positives = 83/173 (47%), Gaps = 33/173 (19%)
Frame = -2
Query: 611 EDSCMESVIMQEICGTIFKEAA*-----------DAERRLYLMKMKYEGQSERLVSLEAS 465
E+S MES +MQ+I I +EAA DAE +L +M +KY+ ++E VS+E
Sbjct: 1010 EESNMESTLMQQIYEVILREAAQNAETTSKEVMKDAEAKLNIMNVKYDCENEARVSIEIK 1069
Query: 464 VLESEKALNXXXXXXXXXXXXXXKISALLEEK-----ECADQIY----------QDLSSF 330
V+E EKAL + A LEEK E AD + Q+L++
Sbjct: 1070 VVEKEKALRLEFDEKERLKQEIILLEASLEEKERSALEIADALVKEKEQFELASQELNNL 1129
Query: 329 KDQAIQQEKLVS-------VINSKFEETLGQTHLYEDKIAKLEKTLKLTIEDL 192
++ QQ+KL+S + E L Q L + +I +L++ L++ ++L
Sbjct: 1130 REHTNQQQKLISESSREADITKGNLVEALEQIDLQKVEICELKQKLEIKRKEL 1182
Score = 28.5 bits (62), Expect(2) = 1e-10
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -1
Query: 198 RFKENALSLVVARESGQKKQVESLSTYV 115
R +NALSLV ARE KQ+ES+ ++
Sbjct: 1197 RETQNALSLVEAREREHSKQMESIIVFM 1224
>ref|XP_002330600.1| predicted protein [Populus trichocarpa] gi|222872158|gb|EEF09289.1|
predicted protein [Populus trichocarpa]
Length = 660
Score = 59.7 bits (143), Expect = 7e-07
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 22/172 (12%)
Frame = -2
Query: 635 KAIFRWGIEDSCMESVIMQEICGTIFKEAA*DAERRLYLMKMKYEGQSERLVSLEASVLE 456
K+ + IEDS MES+I Q + +EA +AE +L + KY +++ ++LE +E
Sbjct: 332 KSASKLEIEDSDMESIITQGLLEVGLQEAFKEAEEKLGSLNQKYVDENKVRLTLEMEAME 391
Query: 455 SEKALNXXXXXXXXXXXXXXKISALLE---------------EKECADQIYQDLSSFKDQ 321
EKAL ++A ++ EKE + ++L + + Q
Sbjct: 392 KEKALRMSIAEKEKLDQDIHLLTATIQEKDKLVRESTDALEKEKENLELASRELGNLRAQ 451
Query: 320 AIQQEKLVS-------VINSKFEETLGQTHLYEDKIAKLEKTLKLTIEDLRK 186
QQ L+S +I E L + L E++I+KL++ ++L E+LR+
Sbjct: 452 TSQQRLLISQNSEESEIIKHDLLEALDKNKLCEEEISKLQEKIQLVTENLRE 503
>ref|XP_002523187.1| Early endosome antigen, putative [Ricinus communis]
gi|223537594|gb|EEF39218.1| Early endosome antigen,
putative [Ricinus communis]
Length = 903
Score = 57.8 bits (138), Expect(2) = 8e-07
Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
Frame = -2
Query: 611 EDSCMESVIMQEICGTIFKEAA*DAERRLYLMKMKYEGQSERLVSLEASVLESEKALNXX 432
+DS +ES+IM +C + +E+ +AE + ++Y ++E VS E + LE E+AL
Sbjct: 580 DDSVIESIIMPGLCEIVLRESFKEAEEKAVTWNLRYINENEARVSFEMAALEKEQALRLN 639
Query: 431 XXXXXXXXXXXXKI---------------SALLEEKECADQIYQDLSSFKDQAIQQEKLV 297
+ AL +EKE + Q L + + Q + Q++LV
Sbjct: 640 IAEKDKLEQEMLLLRAVIDDKTNLVLEVTGALAQEKEKYELASQKLDNLRVQTMHQKELV 699
Query: 296 S-------VINSKFEETLGQTHLYEDKIAKLEKTLKLTIEDLRKML 180
S ++ ++ L + + + +I+KL + LK+ + LR+ +
Sbjct: 700 SKYDGELQIVKDDLDKALEKIKMDKGEISKLREQLKIVTQKLREAI 745
Score = 21.6 bits (44), Expect(2) = 8e-07
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 189 ENALSLVVARESGQKKQVES 130
+N L LV ARE +KQ+ S
Sbjct: 759 QNTLVLVEAREIEYRKQINS 778