BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010375
         (1226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276502.1| PREDICTED: splicing factor U2af small subuni...   416   e-114
ref|XP_004145565.1| PREDICTED: splicing factor U2af small subuni...   406   e-111
ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, pu...   405   e-110
ref|XP_002307825.1| predicted protein [Populus trichocarpa] gi|2...   394   e-107
ref|XP_002300614.1| predicted protein [Populus trichocarpa] gi|2...   390   e-106

>ref|XP_002276502.1| PREDICTED: splicing factor U2af small subunit B isoform 1 [Vitis
            vinifera] gi|359491881|ref|XP_003634337.1| PREDICTED:
            splicing factor U2af small subunit B isoform 2 [Vitis
            vinifera]
          Length = 272

 Score =  416 bits (1070), Expect = e-114
 Identities = 207/276 (75%), Positives = 216/276 (78%)
 Frame = -3

Query: 1053 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 874
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 873  GVDAQGQPIDPRKIQEHFEDFYEDIYEELHKFGEIESLNICDNLADHMVGNVYVQFTEED 694
            GVDAQGQPIDPRKIQEHFEDFYEDI+EEL KFGEIESLN+CDNLADHM+GNVYVQF EE+
Sbjct: 61   GVDAQGQPIDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFKEEE 120

Query: 693  QAAAALKALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKQIGRDL 514
            QAAAAL+ALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVK IGRDL
Sbjct: 121  QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 180

Query: 513  SKKLYGXXXXXXXXXXXXXXXXXXXXXXXSEGLGDYRDRGDYYGNGWRSADRHGRYDSDG 334
             +KL+G                               DRGDY GNG RS D+HG   SDG
Sbjct: 181  RRKLFGRYSGYGRSRSRSRSLSPRYRRDSDRRRSG--DRGDYRGNGRRSGDKHG---SDG 235

Query: 333  GRRRHGSPRHTXXXXXXXXXXXXXXXXEWNREREGR 226
            GRRRHGSPR +                 WNRERE R
Sbjct: 236  GRRRHGSPRRSRSPVREGSEERRARIELWNREREER 271


>ref|XP_004145565.1| PREDICTED: splicing factor U2af small subunit B-like [Cucumis
            sativus] gi|449485076|ref|XP_004157064.1| PREDICTED:
            splicing factor U2af small subunit B-like [Cucumis
            sativus]
          Length = 276

 Score =  406 bits (1043), Expect = e-111
 Identities = 206/278 (74%), Positives = 216/278 (77%), Gaps = 4/278 (1%)
 Frame = -3

Query: 1053 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 874
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 873  GVDAQGQPIDPRKIQEHFEDFYEDIYEELHKFGEIESLNICDNLADHMVGNVYVQFTEED 694
            GVDAQGQPIDPRKIQEHFEDFYEDIYEEL KFGEIESLN+CDNLADHM+GNVYVQF EED
Sbjct: 61   GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120

Query: 693  QAAAALKALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKQIGRDL 514
            QAAAAL+ALQGRFYSGRPIIADFSPVTDFREATCRQ+EENNCNRGGYCNFMHVK IG+DL
Sbjct: 121  QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180

Query: 513  SKKLYGXXXXXXXXXXXXXXXXXXXXXXXSEGLGDYRDRGDYYGNGWRSADRHGRYDSDG 334
             +KL+G                            DYRDR DY GNG RS +RH   D DG
Sbjct: 181  RRKLFGRYRGYRASRSRSRSLSPRNRKEHDRRERDYRDR-DYRGNG-RSKERH---DRDG 235

Query: 333  GRRRHGSPR----HTXXXXXXXXXXXXXXXXEWNRERE 232
            GRRR GSPR     +                +WNRERE
Sbjct: 236  GRRRQGSPRRSRSRSPVIVREGSEERRARIEQWNRERE 273


>ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus communis]
            gi|223551442|gb|EEF52928.1| U2 snrnp auxiliary factor,
            small subunit, putative [Ricinus communis]
          Length = 272

 Score =  405 bits (1040), Expect = e-110
 Identities = 205/277 (74%), Positives = 213/277 (76%), Gaps = 3/277 (1%)
 Frame = -3

Query: 1053 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 874
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 873  GVDAQGQPIDPRKIQEHFEDFYEDIYEELHKFGEIESLNICDNLADHMVGNVYVQFTEED 694
            GVDAQGQPIDPRKIQEHFEDFYEDI+EEL KFGEIESLN+CDNLADHM+GNVYVQF EED
Sbjct: 61   GVDAQGQPIDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120

Query: 693  QAAAALKALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKQIGRDL 514
            QAAAAL+ALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVK IGRDL
Sbjct: 121  QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 180

Query: 513  SKKLYGXXXXXXXXXXXXXXXXXXXXXXXSEG---LGDYRDRGDYYGNGWRSADRHGRYD 343
             +KL+G                               DYRDR DY GNG RS DRH    
Sbjct: 181  RRKLFGRYRGYRASRSRSRSVSPSRHRREKSNDRRERDYRDR-DYRGNGRRSGDRH---- 235

Query: 342  SDGGRRRHGSPRHTXXXXXXXXXXXXXXXXEWNRERE 232
                RRRHGSPR +                +WNRERE
Sbjct: 236  ---DRRRHGSPRRSRSPVREGSEERRARIEQWNRERE 269


>ref|XP_002307825.1| predicted protein [Populus trichocarpa] gi|222857274|gb|EEE94821.1|
            predicted protein [Populus trichocarpa]
          Length = 272

 Score =  394 bits (1012), Expect = e-107
 Identities = 196/276 (71%), Positives = 212/276 (76%), Gaps = 2/276 (0%)
 Frame = -3

Query: 1053 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 874
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSN Y RPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNTYHRPDMITP 60

Query: 873  GVDAQGQPIDPRKIQEHFEDFYEDIYEELHKFGEIESLNICDNLADHMVGNVYVQFTEED 694
            GVDAQGQP+DP KIQEHFEDFYEDI+EEL KFGEIE+LN+CDNLADHM+GNVYVQF EED
Sbjct: 61   GVDAQGQPLDPHKIQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIGNVYVQFKEED 120

Query: 693  QAAAALKALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKQIGRDL 514
            QAAAAL++LQGRFYSGRPIIADFSPVTDFREATCRQ+EENNCNRGGYCNFMHVK IG+DL
Sbjct: 121  QAAAALQSLQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLIGKDL 180

Query: 513  SKKLYGXXXXXXXXXXXXXXXXXXXXXXXSEGL-GDYRDRG-DYYGNGWRSADRHGRYDS 340
             +KL+G                        +    DYRDR  DY GNG R+       D 
Sbjct: 181  RRKLFGRYRGYRVSRSRSRSVSPRRRDRDYDRRERDYRDRDRDYRGNGRRN-------DR 233

Query: 339  DGGRRRHGSPRHTXXXXXXXXXXXXXXXXEWNRERE 232
            DGGR+RHGSPR +                +WNRERE
Sbjct: 234  DGGRKRHGSPRRSRSPVREGSEERRARIEQWNRERE 269


>ref|XP_002300614.1| predicted protein [Populus trichocarpa] gi|222842340|gb|EEE79887.1|
            predicted protein [Populus trichocarpa]
          Length = 273

 Score =  390 bits (1002), Expect = e-106
 Identities = 198/280 (70%), Positives = 213/280 (76%), Gaps = 6/280 (2%)
 Frame = -3

Query: 1053 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 874
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 873  GVDAQGQPIDPRKIQEHFEDFYEDIYEELHKFGEIESLNICDNLADHMVGNVYVQFTEED 694
            GVDAQGQP+DP KIQEHFE+FYEDI+EEL+KFGEIESLN+CDNLADHM+GNVYV F EED
Sbjct: 61   GVDAQGQPLDPHKIQEHFEEFYEDIFEELNKFGEIESLNVCDNLADHMIGNVYVLFKEED 120

Query: 693  QAAAALKALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKQIGRDL 514
            QAAAAL+ALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVK IGRDL
Sbjct: 121  QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 180

Query: 513  SKKLYGXXXXXXXXXXXXXXXXXXXXXXXSEGL-GDYRDRG-----DYYGNGWRSADRHG 352
             +KL+G                        +    DYRDR      DY GNG     R+ 
Sbjct: 181  RRKLFGRYRGYRVSRSRSRSVSPRKRERDYDRRERDYRDRDRDRDRDYRGNG----RRND 236

Query: 351  RYDSDGGRRRHGSPRHTXXXXXXXXXXXXXXXXEWNRERE 232
            +YD +GGR+RHGS                    +WNRERE
Sbjct: 237  KYDREGGRKRHGS------TVREGSEERRARIEQWNRERE 270