BLASTX nr result

ID: Coptis23_contig00010357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010357
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545233.1| PREDICTED: probable LRR receptor-like serine...    75   6e-12
emb|CBI17206.3| unnamed protein product [Vitis vinifera]               75   7e-12
ref|XP_003545235.1| PREDICTED: probable LRR receptor-like serine...    70   2e-10
emb|CBI25502.3| unnamed protein product [Vitis vinifera]               69   5e-10
ref|XP_002329291.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10

>ref|XP_003545233.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At3g47570-like [Glycine max]
          Length = 948

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 37/85 (43%), Positives = 55/85 (64%)
 Frame = -3

Query: 322  DHMFKDGLSLREYSRMALPLGVMDIVDMRLVSGTPNNGTTIAINQINESLSSMVRIGLAC 143
            D+MF +GLSL ++ +M +P  + +IVD RL+      GT +    I E L +  RIG++C
Sbjct: 862  DNMFGEGLSLHKFCQMTIPEEITEIVDSRLLVPINKEGTRVIETNIRECLVAFARIGVSC 921

Query: 142  SEEVAVERMDIRDVLKELSSIKEGL 68
            S E+ V RMDI+DV+ EL +IK+ L
Sbjct: 922  SAELPVRRMDIKDVIMELEAIKQKL 946


>emb|CBI17206.3| unnamed protein product [Vitis vinifera]
          Length = 840

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 44/93 (47%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
 Frame = -3

Query: 322  DHMFKDGLSLREYSRMALPLGVMDIVDMRLVSGTPNNGTTIAIN-----QINESLSSMVR 158
            +HMF DGLSL  +S+MALP  VM+I D  LV  +      IA +     ++ + L+S+ R
Sbjct: 725  EHMFSDGLSLHSFSKMALPERVMEIADSTLVGESGEAINNIANHGDMEGRMQDCLASIAR 784

Query: 157  IGLACSEEVAVERMDIRDVLKELSSIKEGLLRV 59
            IG+ACSEE    RMDI+DV+ EL+ IKE  L V
Sbjct: 785  IGVACSEESPGGRMDIKDVVMELNIIKEVFLGV 817


>ref|XP_003545235.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At3g47570-like [Glycine max]
          Length = 952

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 40/90 (44%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
 Frame = -3

Query: 322  DHMFKDGLSLREYSRMALPLGVMDIVDMRL-VSGTPNNGTTIAINQ--INESLSSMVRIG 152
            D+ F + LSL ++ +MA+P G+ +IVD RL V  T   GT + + +  I E L S  RIG
Sbjct: 863  DNKFGESLSLHKFCQMAIPEGITEIVDSRLLVPTTTEEGTRVRVMERNIRECLVSFARIG 922

Query: 151  LACSEEVAVERMDIRDVLKELSSIKEGLLR 62
            L CS E+ V+R+ I+DV+ EL  IK+ L R
Sbjct: 923  LTCSAELPVQRISIKDVIVELHLIKKKLAR 952


>emb|CBI25502.3| unnamed protein product [Vitis vinifera]
          Length = 978

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 41/86 (47%), Positives = 52/86 (60%)
 Frame = -3

Query: 322 DHMFKDGLSLREYSRMALPLGVMDIVDMRLVSGTPNNGTTIAINQINESLSSMVRIGLAC 143
           + MF DGLSL   S+MA P  VM+IVD  LV     +       ++   L S  RIG+AC
Sbjct: 567 EDMFSDGLSLHNLSKMAFPERVMEIVDSNLVGELDED-------RMYHCLVSFARIGVAC 619

Query: 142 SEEVAVERMDIRDVLKELSSIKEGLL 65
           SEE A +RMDI+DV+ EL+ IKE  L
Sbjct: 620 SEESASDRMDIKDVVIELNIIKEHYL 645


>ref|XP_002329291.1| predicted protein [Populus trichocarpa] gi|222870745|gb|EEF07876.1|
            predicted protein [Populus trichocarpa]
          Length = 1022

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 39/93 (41%), Positives = 62/93 (66%), Gaps = 7/93 (7%)
 Frame = -3

Query: 322  DHMFKDGLSLREYSRMALPLGVMDIVD------MRLVSGTPNNGTT-IAINQINESLSSM 164
            D MFKDGL+L  Y++MALP  ++++VD      +R V+ +   G   I  ++I+  L ++
Sbjct: 924  DGMFKDGLNLHSYAKMALPDRIVEVVDPLLVREIRSVNSSDEMGMYHIGPHEISACLMTI 983

Query: 163  VRIGLACSEEVAVERMDIRDVLKELSSIKEGLL 65
            +++G+ACS E+  ERMDI DV+ EL+ IK+ LL
Sbjct: 984  IKMGVACSVELPRERMDIGDVVTELNRIKDTLL 1016


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