BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010355
         (894 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19367.3| unnamed protein product [Vitis vinifera]              187   2e-45
ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom...   169   8e-40
ref|XP_003555303.1| PREDICTED: pre-mRNA-processing factor 40 hom...   136   7e-30
ref|XP_003535678.1| PREDICTED: pre-mRNA-processing factor 40 hom...   131   2e-28
ref|XP_002522113.1| protein binding protein, putative [Ricinus c...   118   2e-24

>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
          Length = 1030

 Score =  187 bits (476), Expect = 2e-45
 Identities = 116/286 (40%), Positives = 143/286 (50%), Gaps = 3/286 (1%)
 Frame = +2

Query: 44  MASNSQPPGAQPFWPPIGGSAGPPQNFAPPMSMQFQVPFPQQQANPFNMAASQHFRPVGP 223
           MA+N Q  GAQP  PP  GS GP QNF PP+SMQF+   P QQ +PF  AASQ FRP+G 
Sbjct: 1   MANNPQSSGAQPLRPPAVGSMGP-QNFGPPLSMQFRPAVPGQQGHPFIPAASQQFRPIGQ 59

Query: 224 GSSASNMGLHAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPPPFVHPNRPLTSIPSQ 403
             S+ N+G  +G                              +P P++  NRPLTS   Q
Sbjct: 60  NISSPNVGGPSGQNQPPQFSQAMQQLPPRPNQPGPIAPSSQPIPMPYIQQNRPLTSSSPQ 119

Query: 404 PLQNTQHLNNHMSSVGGMGTPLSSSYTFA---YSHPQNGITTSSQYQPMSHMPAPVTSLS 574
           P Q    LN+HM  + G G P SSSYTFA   +  PQ+ I  S+Q+QP+S M APV    
Sbjct: 120 PNQTAPPLNSHMPGLAGPGMPFSSSYTFAPASFGQPQSTINASAQFQPISQMHAPV---G 176

Query: 575 GQTSVSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTSVTV 754
           GQ  +SSG                                                +  +
Sbjct: 177 GQPWLSSGSQSGALVTPVHQAGQQPS-----------------------------VTADI 207

Query: 755 LATNLQPRPTTQSSADWIEHTSADGKRYYYNKRSKLSSWEKPLELM 892
            A N+ P PT QSS+DW EHTSADG+RYYYNK+++LSSWEKPLELM
Sbjct: 208 PAGNV-PNPTHQSSSDWQEHTSADGRRYYYNKKTRLSSWEKPLELM 252


>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
           vinifera]
          Length = 1020

 Score =  169 bits (428), Expect = 8e-40
 Identities = 109/283 (38%), Positives = 136/283 (48%)
 Frame = +2

Query: 44  MASNSQPPGAQPFWPPIGGSAGPPQNFAPPMSMQFQVPFPQQQANPFNMAASQHFRPVGP 223
           MA+N Q  GAQP  PP  GS GP QNF PP+SMQF+   P QQ +PF  AASQ FRP+G 
Sbjct: 15  MANNPQSSGAQPLRPPAVGSMGP-QNFGPPLSMQFRPAVPGQQGHPFIPAASQQFRPIGQ 73

Query: 224 GSSASNMGLHAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPPPFVHPNRPLTSIPSQ 403
             S+ N+G  +G                              +P P++  NRPLTS   Q
Sbjct: 74  NISSPNVGGPSGQNQPPQFSQAMQQLPPRPNQPGPIAPSSQPIPMPYIQQNRPLTSSSPQ 133

Query: 404 PLQNTQHLNNHMSSVGGMGTPLSSSYTFAYSHPQNGITTSSQYQPMSHMPAPVTSLSGQT 583
           P Q    LN+HM    G+  P S      +  PQ+ I  S+Q+QP+S M APV    GQ 
Sbjct: 134 PNQTAPPLNSHMP---GLFAPAS------FGQPQSTINASAQFQPISQMHAPV---GGQP 181

Query: 584 SVSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTSVTVLAT 763
            +SSG                                              VT+   ++ 
Sbjct: 182 WLSSG----------------------------SQSGALVTPVHQAGQQPSVTADIPVSA 213

Query: 764 NLQPRPTTQSSADWIEHTSADGKRYYYNKRSKLSSWEKPLELM 892
              P PT QSS+DW EHTSADG+RYYYNK+++LSSWEKPLELM
Sbjct: 214 GNVPNPTHQSSSDWQEHTSADGRRYYYNKKTRLSSWEKPLELM 256


>ref|XP_003555303.1| PREDICTED: pre-mRNA-processing factor 40 homolog A-like [Glycine
           max]
          Length = 1072

 Score =  136 bits (342), Expect = 7e-30
 Identities = 99/296 (33%), Positives = 132/296 (44%), Gaps = 13/296 (4%)
 Frame = +2

Query: 44  MASNSQPPGAQPFWPPIGGSAGPPQNFAPPMSMQFQVPFPQQQANPFNMAASQHFR--PV 217
           M++N Q PG QP  PPI GS  PP+NF PPM +QF+   P QQ+  F    SQH++  PV
Sbjct: 1   MSNNPQYPGLQPLRPPIAGSLDPPRNFVPPMPVQFRPAVPTQQSQQFISMPSQHYQHQPV 60

Query: 218 GPGS-SASNMGLHAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPPPFVHPNRPLTSI 394
           GPG      +G+                                A+P P   PN     I
Sbjct: 61  GPGGVPLIGVGI---PPQNQQPQFSQPIQQLPPRPSPQLPPPSQAIPMPVARPNM---HI 114

Query: 395 PSQPLQ-------NTQHLNNHMSSVGGMGTPLSSSYTFA---YSHPQNGITTSSQYQPMS 544
           PS+ +        ++Q  N +   +GG G PLSSSYTFA   Y   Q    ++ Q+QP+ 
Sbjct: 115 PSESMMQQSDSQAHSQAPNGYTPGLGGPGMPLSSSYTFAPSTYGQVQANFNSTGQFQPVP 174

Query: 545 HMPAPVTSLSGQTSVSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 724
            + A +T  S Q S+++G                                          
Sbjct: 175 QIHA-LTGSSSQ-SITTGATLQSNGGQPL------------------------------- 201

Query: 725 XXXXVTSVTVLATNLQPRPTTQSSADWIEHTSADGKRYYYNKRSKLSSWEKPLELM 892
               VT+V  LAT  QP+ T     DWIEHTSA G+ +YYNK++K+SSWEKP ELM
Sbjct: 202 ----VTTVMPLATIAQPQLTKNGPTDWIEHTSATGRTFYYNKKTKVSSWEKPFELM 253


>ref|XP_003535678.1| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Glycine
           max]
          Length = 1017

 Score =  131 bits (330), Expect = 2e-28
 Identities = 97/293 (33%), Positives = 130/293 (44%), Gaps = 10/293 (3%)
 Frame = +2

Query: 44  MASNSQPPGAQPFWPPIGGSAGPPQNFAPPMSMQFQVPFPQQQANPFNMAASQHF--RPV 217
           MA+N Q PG QP  PPI GS  PP+NF PPM +QF+   P QQ+  F    SQH+  +PV
Sbjct: 1   MANNPQYPGLQPLRPPIAGSLDPPRNFVPPMPVQFRPVVPTQQSQQFISMPSQHYQHQPV 60

Query: 218 GPGS-SASNMGLHAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPPPFVHPNR--PLT 388
           GPG      +G+                                A+P P   PN   P  
Sbjct: 61  GPGGVPLIGVGM---PPQNQRSQFSQPIQQLPPRPSPQLPPPSQAIPMPVARPNMHIPSE 117

Query: 389 SIPSQP--LQNTQHLNNHMSSVGGMGTPLSSSYTF---AYSHPQNGITTSSQYQPMSHMP 553
           S+  QP    ++Q  N +   +GG   PLS+SYTF   AY   Q   +++ Q+QP+  + 
Sbjct: 118 SMMHQPDSQVHSQAPNGYTPGLGGPAMPLSASYTFAPSAYGQVQTNFSSTGQFQPVPQIH 177

Query: 554 APVTSLSGQTSVSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 733
           A +T  S Q S+++G                                             
Sbjct: 178 A-LTGSSSQ-SITTG-----------------------------------ATLQSNGGQP 200

Query: 734 XVTSVTVLATNLQPRPTTQSSADWIEHTSADGKRYYYNKRSKLSSWEKPLELM 892
            VT+V   AT  QP+       DWIEHTSA G+ +YYNK++K+SSWEKP ELM
Sbjct: 201 SVTTVMPSATIAQPQLAKNGPTDWIEHTSATGRTFYYNKKTKVSSWEKPFELM 253


>ref|XP_002522113.1| protein binding protein, putative [Ricinus communis]
           gi|223538712|gb|EEF40313.1| protein binding protein,
           putative [Ricinus communis]
          Length = 956

 Score =  118 bits (296), Expect = 2e-24
 Identities = 87/268 (32%), Positives = 113/268 (42%), Gaps = 7/268 (2%)
 Frame = +2

Query: 110 PPQNFAPPMSMQFQVPFPQQQANPFNMAASQHFRPVGPGSSASNMGLHAGXXXXXXXXXX 289
           PP+NF PPM MQF+   P QQ+  F   AS HF+PVG G    N GL +           
Sbjct: 3   PPRNFVPPMPMQFRPVVPAQQSQQFIPVASPHFQPVGRGVPLMNAGLPS-QPPQSQFPPS 61

Query: 290 XXXXXXXXXXXXXXXXXXXAVPPPFVHPNRPLTSIPSQPLQNTQHLNNHMSSVGGMGTPL 469
                               +  P    NR +TS  S P  +     N+   +GG G PL
Sbjct: 62  VQQFPSRPGQPGHGPPPSQVISLPNAQANRHVTSGSSLPPPSVPTSINYAPGLGGPGAPL 121

Query: 470 SSSYTF---AYSHPQNGITTSSQYQPMSHM---PAPVTSLSGQTSVSSGXXXXXXXXXXX 631
           SSSYTF   +Y  P     T SQYQP+S M     P   L+G +SV+             
Sbjct: 122 SSSYTFVPSSYGQPPVAANTVSQYQPISQMRPPSIPAGGLAGSSSVNQSITPVTPMQLNG 181

Query: 632 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTSVTVLATNLQP-RPTTQSSADWI 808
                                               +SVT    +L P +P  +++ DW 
Sbjct: 182 EQ----------------------------------SSVT---NDLHPTKPNEETTMDWK 204

Query: 809 EHTSADGKRYYYNKRSKLSSWEKPLELM 892
           EH +A+G+RYYYNKR++ SSWEKP ELM
Sbjct: 205 EHLAANGRRYYYNKRTRQSSWEKPFELM 232