BLASTX nr result

ID: Coptis23_contig00010353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010353
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266107.1| PREDICTED: thylakoid membrane phosphoprotein...   112   2e-23
emb|CAN75451.1| hypothetical protein VITISV_028013 [Vitis vinifera]   112   2e-23
ref|XP_002320236.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-22
gb|ABK95200.1| unknown [Populus trichocarpa]                          110   1e-22
ref|XP_003548086.1| PREDICTED: thylakoid membrane phosphoprotein...   105   3e-21

>ref|XP_002266107.1| PREDICTED: thylakoid membrane phosphoprotein 14 kDa, chloroplastic
           [Vitis vinifera] gi|296089017|emb|CBI38720.3| unnamed
           protein product [Vitis vinifera]
          Length = 171

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/73 (75%), Positives = 64/73 (87%)
 Frame = +2

Query: 5   TGEAPADVVGTEASEILKTVQEAWDKLEDKYAVTLLAFAGVVGLFASFGMISAIDRLPIV 184
           TGEAPA+V  TE  EI+KTVQEAWDK+EDKYAV+ LA AG VGL+ S GM+SAID+LP+V
Sbjct: 68  TGEAPAEVGTTEVPEIIKTVQEAWDKVEDKYAVSSLAAAGFVGLWVSTGMVSAIDKLPLV 127

Query: 185 PGVLELVGIGYSG 223
           PGVLE+VGIGYSG
Sbjct: 128 PGVLEIVGIGYSG 140


>emb|CAN75451.1| hypothetical protein VITISV_028013 [Vitis vinifera]
          Length = 171

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/73 (75%), Positives = 64/73 (87%)
 Frame = +2

Query: 5   TGEAPADVVGTEASEILKTVQEAWDKLEDKYAVTLLAFAGVVGLFASFGMISAIDRLPIV 184
           TGEAPA+V  TE  EI+KTVQEAWDK+EDKYAV+ LA AG VGL+ S GM+SAID+LP+V
Sbjct: 68  TGEAPAEVGTTEVPEIIKTVQEAWDKVEDKYAVSSLAAAGFVGLWVSTGMVSAIDKLPLV 127

Query: 185 PGVLELVGIGYSG 223
           PGVLE+VGIGYSG
Sbjct: 128 PGVLEIVGIGYSG 140


>ref|XP_002320236.1| predicted protein [Populus trichocarpa] gi|222861009|gb|EEE98551.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/73 (73%), Positives = 62/73 (84%)
 Frame = +2

Query: 5   TGEAPADVVGTEASEILKTVQEAWDKLEDKYAVTLLAFAGVVGLFASFGMISAIDRLPIV 184
           TGEAPA+V  TE  EI+KTVQEAWDK+EDKYAV+ L  AG V L+ S G+ISAIDRLP++
Sbjct: 69  TGEAPAEVASTELPEIVKTVQEAWDKVEDKYAVSSLVVAGGVALWGSTGLISAIDRLPLI 128

Query: 185 PGVLELVGIGYSG 223
           PGVLELVGIGYSG
Sbjct: 129 PGVLELVGIGYSG 141


>gb|ABK95200.1| unknown [Populus trichocarpa]
          Length = 172

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/73 (73%), Positives = 62/73 (84%)
 Frame = +2

Query: 5   TGEAPADVVGTEASEILKTVQEAWDKLEDKYAVTLLAFAGVVGLFASFGMISAIDRLPIV 184
           TGEAPA+V  TE  EI+KTVQEAWDK+EDKYAV+ L  AG V L+ S G+ISAIDRLP++
Sbjct: 69  TGEAPAEVASTELPEIVKTVQEAWDKVEDKYAVSSLVVAGGVALWGSTGLISAIDRLPLI 128

Query: 185 PGVLELVGIGYSG 223
           PGVLELVGIGYSG
Sbjct: 129 PGVLELVGIGYSG 141


>ref|XP_003548086.1| PREDICTED: thylakoid membrane phosphoprotein 14 kDa,
           chloroplastic-like [Glycine max]
          Length = 168

 Score =  105 bits (263), Expect = 3e-21
 Identities = 48/73 (65%), Positives = 61/73 (83%)
 Frame = +2

Query: 5   TGEAPADVVGTEASEILKTVQEAWDKLEDKYAVTLLAFAGVVGLFASFGMISAIDRLPIV 184
           TGEAPA+   TE  EI+KT+QE WDK++DKYAV+ LA  GVV L+ S G+ISAIDRLP++
Sbjct: 65  TGEAPAEAAPTEVPEIVKTLQETWDKVDDKYAVSSLALVGVVALWGSVGLISAIDRLPLI 124

Query: 185 PGVLELVGIGYSG 223
           PG+LE+VGIGY+G
Sbjct: 125 PGILEIVGIGYTG 137


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