BLASTX nr result

ID: Coptis23_contig00010352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010352
         (3188 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283949.1| PREDICTED: histone chaperone ASF1B [Vitis vi...   339   2e-90
ref|XP_004150672.1| PREDICTED: histone chaperone ASF1B-like [Cuc...   324   8e-86
ref|XP_002266119.1| PREDICTED: histone chaperone ASF1B [Vitis vi...   320   2e-84
ref|XP_003604068.1| Histone chaperone ASF1B [Medicago truncatula...   319   3e-84
gb|AFK45392.1| unknown [Lotus japonicus]                              318   4e-84

>ref|XP_002283949.1| PREDICTED: histone chaperone ASF1B [Vitis vinifera]
            gi|147809982|emb|CAN60547.1| hypothetical protein
            VITISV_031470 [Vitis vinifera]
            gi|297737738|emb|CBI26939.3| unnamed protein product
            [Vitis vinifera]
          Length = 186

 Score =  339 bits (870), Expect = 2e-90
 Identities = 170/187 (90%), Positives = 173/187 (92%)
 Frame = +3

Query: 2382 MSAVNITNVTVLDNPAAFLNSFQFEISYECLIPLKDDLEWKLIYVGSAEDETYDQLLESV 2561
            MSAVNITNVTVLDNPAAFLN FQFEISYECLIPLKDDLEWKLIYVGSAEDETYDQLLESV
Sbjct: 1    MSAVNITNVTVLDNPAAFLNPFQFEISYECLIPLKDDLEWKLIYVGSAEDETYDQLLESV 60

Query: 2562 LVGPVNVGNYRFVFQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDE 2741
            LVGPVNVGNYRFVFQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDE
Sbjct: 61   LVGPVNVGNYRFVFQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDE 120

Query: 2742 QLREEPPQKVLIDRIQRNILADKPRVTKFPINFHPETNENGGEQAPPSPDQPAENIESGE 2921
            QLREEPPQKVLIDR+QRNILADKPRVTKFPINFHPE NE+ GEQ PPSP    E  E+GE
Sbjct: 121  QLREEPPQKVLIDRVQRNILADKPRVTKFPINFHPENNEH-GEQPPPSP----EINENGE 175

Query: 2922 HPPSPDH 2942
             PP   H
Sbjct: 176  QPPPSHH 182


>ref|XP_004150672.1| PREDICTED: histone chaperone ASF1B-like [Cucumis sativus]
            gi|449519400|ref|XP_004166723.1| PREDICTED: histone
            chaperone ASF1B-like [Cucumis sativus]
          Length = 212

 Score =  324 bits (831), Expect = 8e-86
 Identities = 159/194 (81%), Positives = 168/194 (86%), Gaps = 4/194 (2%)
 Frame = +3

Query: 2382 MSAVNITNVTVLDNPAAFLNSFQFEISYECLIPLKDDLEWKLIYVGSAEDETYDQLLESV 2561
            MSAVNITNVTVLDNPAAFLN FQFEISYECL  LKDDLEWKL YVGSAEDETYDQLLESV
Sbjct: 1    MSAVNITNVTVLDNPAAFLNPFQFEISYECLTSLKDDLEWKLTYVGSAEDETYDQLLESV 60

Query: 2562 LVGPVNVGNYRFVFQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDE 2741
            LVGP+NVGNYRFV QADPPDPSKIREEDI GVTVLLLTCSY+GQEF+RVGYYVNNDYDDE
Sbjct: 61   LVGPINVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120

Query: 2742 QLREEPPQKVLIDRIQRNILADKPRVTKFPINFHPETNENGGEQAPPSPDQPAENIESGE 2921
            QLREEPP KVLIDR+QRNILADKPRVTKFPINFHPE +E+G EQ P SP    E + + E
Sbjct: 121  QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPSSPHHSVEALNNEE 180

Query: 2922 H----PPSPDHASD 2951
                 PPSP  A +
Sbjct: 181  EELQPPPSPSAADE 194


>ref|XP_002266119.1| PREDICTED: histone chaperone ASF1B [Vitis vinifera]
            gi|296087223|emb|CBI33597.3| unnamed protein product
            [Vitis vinifera]
          Length = 193

 Score =  320 bits (819), Expect = 2e-84
 Identities = 156/192 (81%), Positives = 171/192 (89%)
 Frame = +3

Query: 2382 MSAVNITNVTVLDNPAAFLNSFQFEISYECLIPLKDDLEWKLIYVGSAEDETYDQLLESV 2561
            MSAVNITNV VLDNPA+FL  FQFEI+YECL PL DDLEWKLIYVGSAEDETYDQLLESV
Sbjct: 1    MSAVNITNVAVLDNPASFLKPFQFEITYECLTPLADDLEWKLIYVGSAEDETYDQLLESV 60

Query: 2562 LVGPVNVGNYRFVFQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDE 2741
            LVGP+NVGNYRFV QADPPDPSKIREEDI+GVTVLLLTCSY+GQEFIRVGYYVNN+YDDE
Sbjct: 61   LVGPINVGNYRFVLQADPPDPSKIREEDIMGVTVLLLTCSYVGQEFIRVGYYVNNEYDDE 120

Query: 2742 QLREEPPQKVLIDRIQRNILADKPRVTKFPINFHPETNENGGEQAPPSPDQPAENIESGE 2921
            QL+EEPPQKVLIDR+QRNIL+DKPRVTKFPINFHPE N++ G+Q PP PD PAE   + E
Sbjct: 121  QLKEEPPQKVLIDRVQRNILSDKPRVTKFPINFHPE-NKDPGDQ-PPPPDHPAETDGNRE 178

Query: 2922 HPPSPDHASDEA 2957
             PP+  H   +A
Sbjct: 179  EPPASTHHPSDA 190


>ref|XP_003604068.1| Histone chaperone ASF1B [Medicago truncatula]
            gi|355493116|gb|AES74319.1| Histone chaperone ASF1B
            [Medicago truncatula] gi|388502798|gb|AFK39465.1| unknown
            [Medicago truncatula]
          Length = 193

 Score =  319 bits (817), Expect = 3e-84
 Identities = 160/180 (88%), Positives = 164/180 (91%)
 Frame = +3

Query: 2382 MSAVNITNVTVLDNPAAFLNSFQFEISYECLIPLKDDLEWKLIYVGSAEDETYDQLLESV 2561
            MSAVNITNVTVLDNPA+FLN FQFEISYECL  LKDDLEWKLIYVGSAEDETYDQLLESV
Sbjct: 1    MSAVNITNVTVLDNPASFLNPFQFEISYECLAALKDDLEWKLIYVGSAEDETYDQLLESV 60

Query: 2562 LVGPVNVGNYRFVFQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDE 2741
            LVGPVNVGNYRFV QADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDE
Sbjct: 61   LVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDE 120

Query: 2742 QLREEPPQKVLIDRIQRNILADKPRVTKFPINFHPETNENGGEQAPPSPDQPAENIESGE 2921
            QLREEPP KVL DR+QRNIL+DKPRVTKFPINFHPE NEN  EQ PPS  QP    E+GE
Sbjct: 121  QLREEPPTKVLTDRVQRNILSDKPRVTKFPINFHPENNEN-EEQPPPSEQQP----ETGE 175


>gb|AFK45392.1| unknown [Lotus japonicus]
          Length = 205

 Score =  318 bits (816), Expect = 4e-84
 Identities = 157/190 (82%), Positives = 169/190 (88%)
 Frame = +3

Query: 2382 MSAVNITNVTVLDNPAAFLNSFQFEISYECLIPLKDDLEWKLIYVGSAEDETYDQLLESV 2561
            MSAVNITNVTVLDNPA+FL  FQFEISYECL  LKDDLEWKLIYVGSAEDETYDQLLESV
Sbjct: 1    MSAVNITNVTVLDNPASFLTPFQFEISYECLTSLKDDLEWKLIYVGSAEDETYDQLLESV 60

Query: 2562 LVGPVNVGNYRFVFQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDE 2741
            LVGPVNVGNYRFV QADPPDPSKIR+EDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDE
Sbjct: 61   LVGPVNVGNYRFVLQADPPDPSKIRDEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDE 120

Query: 2742 QLREEPPQKVLIDRIQRNILADKPRVTKFPINFHPETNENGGEQAPPSPDQPAENIESGE 2921
            QLREEPP KVL+D++QRNIL+DKPRVTKFPINFHPE N N  EQ P + +QP +N    E
Sbjct: 121  QLREEPPPKVLVDKVQRNILSDKPRVTKFPINFHPENNVN-EEQPPQNDEQPPQN---DE 176

Query: 2922 HPPSPDHASD 2951
             PP P+ +S+
Sbjct: 177  QPPQPEPSSE 186


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