BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010339
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22241.3| unnamed protein product [Vitis vinifera]              160   8e-38
ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containi...   160   8e-38
ref|XP_002533116.1| pentatricopeptide repeat-containing protein,...   141   6e-32
ref|XP_002323869.1| predicted protein [Populus trichocarpa] gi|2...   131   5e-29
gb|EEC74592.1| hypothetical protein OsI_10174 [Oryza sativa Indi...   126   2e-27

>emb|CBI22241.3| unnamed protein product [Vitis vinifera]
          Length = 1256

 Score =  160 bits (406), Expect = 8e-38
 Identities = 82/156 (52%), Positives = 106/156 (67%)
 Frame = +1

Query: 1   NISPALIRRFWRVSTLKPDDVLEILLGFEFDSGNVENEASKVGLLWKLFNWAGKQCEGFE 180
           +ISP   R+F RVS LKP+DVLEILLGF+F   N + E+ KV  LW +F W+  Q +GF+
Sbjct: 105 DISPETTRKFRRVSELKPEDVLEILLGFQFHRENPQIESGKVESLWGIFKWSNDQNKGFK 164

Query: 181 HLPQSYEIMAMLLTRVALLGEAESLLRIMEDRGILLGGHDIFGKIVEGYARARELEKSIS 360
           HLPQS EIMA +L RV LL E ESLL  ME RG+LL GH+IF  +VEGY    E E++IS
Sbjct: 165 HLPQSCEIMASMLIRVGLLREVESLLAEMESRGVLLDGHEIFSNLVEGYVCVSESERAIS 224

Query: 361 MYTYLRSRRFVPSELCFEALLNLLIEKNKTLSAFRV 468
           +Y  +R R  VPS  C+  L++ L++ N+    FRV
Sbjct: 225 VYDQMRGRGLVPSLSCYNVLIDHLVQTNEKQLVFRV 260


>ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15280-like [Vitis vinifera]
          Length = 1273

 Score =  160 bits (406), Expect = 8e-38
 Identities = 82/156 (52%), Positives = 106/156 (67%)
 Frame = +1

Query: 1   NISPALIRRFWRVSTLKPDDVLEILLGFEFDSGNVENEASKVGLLWKLFNWAGKQCEGFE 180
           +ISP   R+F RVS LKP+DVLEILLGF+F   N + E+ KV  LW +F W+  Q +GF+
Sbjct: 122 DISPETTRKFRRVSELKPEDVLEILLGFQFHRENPQIESGKVESLWGIFKWSNDQNKGFK 181

Query: 181 HLPQSYEIMAMLLTRVALLGEAESLLRIMEDRGILLGGHDIFGKIVEGYARARELEKSIS 360
           HLPQS EIMA +L RV LL E ESLL  ME RG+LL GH+IF  +VEGY    E E++IS
Sbjct: 182 HLPQSCEIMASMLIRVGLLREVESLLAEMESRGVLLDGHEIFSNLVEGYVCVSESERAIS 241

Query: 361 MYTYLRSRRFVPSELCFEALLNLLIEKNKTLSAFRV 468
           +Y  +R R  VPS  C+  L++ L++ N+    FRV
Sbjct: 242 VYDQMRGRGLVPSLSCYNVLIDHLVQTNEKQLVFRV 277


>ref|XP_002533116.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527079|gb|EEF29261.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1204

 Score =  141 bits (355), Expect = 6e-32
 Identities = 67/156 (42%), Positives = 101/156 (64%)
 Frame = +1

Query: 1   NISPALIRRFWRVSTLKPDDVLEILLGFEFDSGNVENEASKVGLLWKLFNWAGKQCEGFE 180
           ++ P L RRF R+  L+P+DVLEILLGF+F    V  ++SKV  LW +F W   Q +GF+
Sbjct: 43  DVIPDLTRRFSRILRLRPEDVLEILLGFQFQCEQVAIKSSKVESLWGIFKWVSDQDKGFK 102

Query: 181 HLPQSYEIMAMLLTRVALLGEAESLLRIMEDRGILLGGHDIFGKIVEGYARARELEKSIS 360
           HLP+S+E+MA+LLTR  +  E + LL  ME +GI L  ++IF K++E Y  + + E+++ 
Sbjct: 103 HLPKSFEVMALLLTRCGMFREVQLLLLAMERQGISLDNNEIFSKLIERYVSSCDSERAVL 162

Query: 361 MYTYLRSRRFVPSELCFEALLNLLIEKNKTLSAFRV 468
           MY  ++ +  VPS  C+  L+NLL+    T   FR+
Sbjct: 163 MYDRMQEQNLVPSLFCYHGLINLLVRMRSTQLVFRI 198


>ref|XP_002323869.1| predicted protein [Populus trichocarpa] gi|222866871|gb|EEF04002.1|
           predicted protein [Populus trichocarpa]
          Length = 1158

 Score =  131 bits (330), Expect = 5e-29
 Identities = 67/156 (42%), Positives = 100/156 (64%)
 Frame = +1

Query: 1   NISPALIRRFWRVSTLKPDDVLEILLGFEFDSGNVENEASKVGLLWKLFNWAGKQCEGFE 180
           ++ P + RRF RV  LKP+DVLE+LLGF+F+   V  +++KV  LW++F  A +Q +GF 
Sbjct: 8   DVIPHVTRRFLRVLRLKPEDVLEMLLGFQFECERVAVKSTKVESLWEIFKCANEQDKGFR 67

Query: 181 HLPQSYEIMAMLLTRVALLGEAESLLRIMEDRGILLGGHDIFGKIVEGYARARELEKSIS 360
           H P+S E+MA +L R  +  EA+ LL  ME +GI +    IF  ++EGY    +LE+++ 
Sbjct: 68  HFPKSCEVMASILVRHGMFREAQLLLLAMERQGISMDSSKIFVSLIEGYVGVGDLERAVL 127

Query: 361 MYTYLRSRRFVPSELCFEALLNLLIEKNKTLSAFRV 468
           +Y  +R R  VPS LC  AL++L +   +T  AFRV
Sbjct: 128 VYDQMRDRDLVPSLLCCRALVDLSVRMKRTQLAFRV 163


>gb|EEC74592.1| hypothetical protein OsI_10174 [Oryza sativa Indica Group]
          Length = 1276

 Score =  126 bits (317), Expect = 2e-27
 Identities = 64/155 (41%), Positives = 93/155 (60%)
 Frame = +1

Query: 4   ISPALIRRFWRVSTLKPDDVLEILLGFEFDSGNVENEASKVGLLWKLFNWAGKQCEGFEH 183
           +SP  +R FWR S LKPDD L IL+GF  D+  V+    K   LW L+ WA  Q + F+H
Sbjct: 139 LSPETLRPFWRASELKPDDFLNILIGFGPDAAEVK----KAIFLWNLYRWASWQSKAFQH 194

Query: 184 LPQSYEIMAMLLTRVALLGEAESLLRIMEDRGILLGGHDIFGKIVEGYARARELEKSISM 363
           LP+S EIM  +L    +L +AESLL +++   +L     +F ++++ YA A  L KSIS+
Sbjct: 195 LPRSNEIMVSILANAHMLSQAESLLLLLDGNRVLADAGKLFSQVIQAYAEAGNLGKSISI 254

Query: 364 YTYLRSRRFVPSELCFEALLNLLIEKNKTLSAFRV 468
           Y   + R  +PS  C++ LL+LL+E+ K     RV
Sbjct: 255 YDCAQDRCLIPSGSCYQVLLHLLMERRKNDLVLRV 289