BLASTX nr result
ID: Coptis23_contig00010333
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00010333
(2041 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002326230.1| predicted protein [Populus trichocarpa] gi|2... 716 0.0
ref|XP_002264311.2| PREDICTED: threonine dehydratase biosyntheti... 713 0.0
ref|XP_002528625.1| threonine dehydratase/deaminase, putative [R... 713 0.0
ref|XP_002884774.1| L-O-methylthreonine resistant 1 [Arabidopsis... 706 0.0
ref|NP_187616.1| threonine dehydratase biosynthetic [Arabidopsis... 703 0.0
>ref|XP_002326230.1| predicted protein [Populus trichocarpa] gi|222833423|gb|EEE71900.1|
predicted protein [Populus trichocarpa]
Length = 543
Score = 716 bits (1848), Expect = 0.0
Identities = 379/535 (70%), Positives = 427/535 (79%), Gaps = 2/535 (0%)
Frame = +3
Query: 174 KVAADSLQYETGFLGAVPEKLKEDDDG--CPSTLWYLTSILSSKVYDVAIESPLDHAKKL 347
KV+A+SLQY +G+LGAVPE+ D D + + YLT+ILSSKVYDVAIESPL A KL
Sbjct: 11 KVSANSLQYPSGYLGAVPERTVNDGDNESIINAMEYLTNILSSKVYDVAIESPLQLAPKL 70
Query: 348 SDRLGVKFLLKREDLQPVFSFKLRGAYNMMAKLPRDQLDRGVICSSAGNHAQGVALAACK 527
S+RLGVK LKREDLQPVFSFKLRGAYNMMAKLP++QL RGVICSSAGNHAQGVALAA +
Sbjct: 71 SERLGVKVWLKREDLQPVFSFKLRGAYNMMAKLPKEQLQRGVICSSAGNHAQGVALAAKR 130
Query: 528 LGCDAVIVMPVTTPGIKVESVQKLGATVVLKGDSYDEAQAHAKQRSDLEGRTFIPPFDHP 707
LGCDAVI MPVTTP IK +SV++LGATVVL GDSYDEAQ +AK+R+ E RTFIPPFDHP
Sbjct: 131 LGCDAVIAMPVTTPEIKWQSVERLGATVVLVGDSYDEAQTYAKKRAKEEDRTFIPPFDHP 190
Query: 708 DVIAGQGTVGLEILRQANGPLHAVFVPVXXXXXXXXXXXXXKQVAPEVKIIGVEPADANA 887
DVI GQGTVG+EI+RQ GPLHA+FVPV K+V PEVKIIGVEP+DANA
Sbjct: 191 DVIMGQGTVGMEIVRQMQGPLHAIFVPVGGGGLIAGIAAYVKRVNPEVKIIGVEPSDANA 250
Query: 888 LALSFHHGQRVMLEQAGGFADGVAVKVVGEETFRLCRELVDGVVLVSKDAICASIKDMFE 1067
+ALS HHGQRVML+Q GGFADGVAVK VGEETFRLC+ELVDGVVLVS+DAICASIKDMFE
Sbjct: 251 MALSLHHGQRVMLDQVGGFADGVAVKEVGEETFRLCKELVDGVVLVSRDAICASIKDMFE 310
Query: 1068 EKRSXXXXXXXXXXXXXXXYCKYYGLKNETVVAIASGANMNFSTLKLVAELADIGRQREA 1247
EKRS YCKYYG+K VVAI SGANMNF L++V ELA++GRQ+EA
Sbjct: 311 EKRSILEPAGALALAGAEAYCKYYGVKGANVVAITSGANMNFDKLRVVTELANVGRQQEA 370
Query: 1248 VLSTCMPEEPGSFKRFCELVGPKMNITEFKYRCDGTDKAVVLYSVGLHTVSELTALVNRM 1427
+L+T MPE PGSFK FCELVGP MNI+EFKYR + AVVLYSVGLHT EL A+ RM
Sbjct: 371 LLATVMPEVPGSFKHFCELVGP-MNISEFKYRSNSEKDAVVLYSVGLHTAFELEAMKKRM 429
Query: 1428 EYSQLETENYTSNGLVKDHLRHLIGSGRSMLPRDERLFRFVFPERPGALMKFLDAFSPRW 1607
E SQL T N T++ LVKDHLR+LIG G+ +P DE L RFVFPERPGALMKFLD+FSPRW
Sbjct: 430 ESSQLRTYNLTASDLVKDHLRYLIG-GKLNVP-DEVLCRFVFPERPGALMKFLDSFSPRW 487
Query: 1608 NISLFHYRAQGETGANVLVGMQVLDSELDEFHSCANCLGFDYTDETYNPGRDLLM 1772
NISLFHYR QGETGANVLVG+QV SE+DEF S AN LG+DY T + LLM
Sbjct: 488 NISLFHYRGQGETGANVLVGIQVPQSEMDEFCSRANSLGYDYVVVTDDNDFHLLM 542
>ref|XP_002264311.2| PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like
[Vitis vinifera] gi|297740025|emb|CBI30207.3| unnamed
protein product [Vitis vinifera]
Length = 606
Score = 713 bits (1840), Expect = 0.0
Identities = 378/574 (65%), Positives = 444/574 (77%), Gaps = 2/574 (0%)
Frame = +3
Query: 57 IKSAITNPTFKTSSQNVTTTSSAEKXXXXXXXXXXXXXNKVAADSLQYETGFLGAVPEKL 236
IK+ I+ P + S + TT +S++ +V++DSLQY+ G +GAVP++
Sbjct: 38 IKATISKPAAEISGTSSTTVTSSQTSLHPSPVPPL---KRVSSDSLQYQPGCIGAVPDRT 94
Query: 237 KEDD-DGCPSTLWYLTSILSSKVYDVAIESPLDHAKKLSDRLGVKFLLKREDLQPVFSFK 413
D DG + YLT+ILSSKVYDVAIESPL A KLS+RLG + LKREDLQPVFSFK
Sbjct: 95 IHDGIDGVVGAMEYLTNILSSKVYDVAIESPLQLAPKLSERLGAQIWLKREDLQPVFSFK 154
Query: 414 LRGAYNMMAKLPRDQLDRGVICSSAGNHAQGVALAACKLGCDAVIVMPVTTPGIKVESVQ 593
LRGAYNMMAK+P++QL+RGVICSSAGNHAQGVALAA +LGC+AVI MPVTTP IK +SV+
Sbjct: 155 LRGAYNMMAKIPKEQLERGVICSSAGNHAQGVALAAKRLGCNAVIAMPVTTPEIKWKSVE 214
Query: 594 KLGATVVLKGDSYDEAQAHAKQRSDLEGRTFIPPFDHPDVIAGQGTVGLEILRQANGPLH 773
+LGATVVL GDSYDEAQA+AKQR + E RTFIPPFDHPDVI GQGT+G+EI+RQ GPL
Sbjct: 215 RLGATVVLVGDSYDEAQAYAKQRGEEECRTFIPPFDHPDVIMGQGTIGMEIVRQMQGPLD 274
Query: 774 AVFVPVXXXXXXXXXXXXXKQVAPEVKIIGVEPADANALALSFHHGQRVMLEQAGGFADG 953
A+FVPV K+V+PEVKIIGVEP DANA+ALS HH QRVML+Q GGFADG
Sbjct: 275 AIFVPVGGGGLIAGIAAYVKRVSPEVKIIGVEPCDANAMALSLHHDQRVMLDQVGGFADG 334
Query: 954 VAVKVVGEETFRLCRELVDGVVLVSKDAICASIKDMFEEKRSXXXXXXXXXXXXXXXYCK 1133
VAVKVVGEETFRLCREL+DG+VLVS+DAICASIK+MFEEKRS YCK
Sbjct: 335 VAVKVVGEETFRLCRELIDGIVLVSRDAICASIKNMFEEKRSILEPAGALALAGAEAYCK 394
Query: 1134 YYGLKNETVVAIASGANMNFSTLKLVAELADIGRQREAVLSTCMPEEPGSFKRFCELVGP 1313
YYG+K +VAI SGANMNF L+LV ELAD+GRQREAVL+T +PEEPGSFK+FCE+VG
Sbjct: 395 YYGIKGGNIVAITSGANMNFDRLRLVTELADVGRQREAVLATLLPEEPGSFKQFCEMVG- 453
Query: 1314 KMNITEFKYRCD-GTDKAVVLYSVGLHTVSELTALVNRMEYSQLETENYTSNGLVKDHLR 1490
MNITEFKYR + +KA+VLYSVGLHTV EL+A+V RME SQL T N T++ LVKDHLR
Sbjct: 454 HMNITEFKYRYNPHKEKALVLYSVGLHTVLELSAMVERMESSQLTTLNLTNDDLVKDHLR 513
Query: 1491 HLIGSGRSMLPRDERLFRFVFPERPGALMKFLDAFSPRWNISLFHYRAQGETGANVLVGM 1670
HL+G GRS + +E L RFVFPERPG LMKFLD FSPRWNISLFHYR QGE GANVLVG+
Sbjct: 514 HLMG-GRSHV-ENELLCRFVFPERPGTLMKFLDTFSPRWNISLFHYRGQGEAGANVLVGI 571
Query: 1671 QVLDSELDEFHSCANCLGFDYTDETYNPGRDLLM 1772
QV ++E+ EF A+ LG++Y ET N LLM
Sbjct: 572 QVPETEMTEFKRRADALGYEYAVETSNKAYLLLM 605
>ref|XP_002528625.1| threonine dehydratase/deaminase, putative [Ricinus communis]
gi|223531914|gb|EEF33728.1| threonine
dehydratase/deaminase, putative [Ricinus communis]
Length = 618
Score = 713 bits (1840), Expect = 0.0
Identities = 378/572 (66%), Positives = 443/572 (77%), Gaps = 2/572 (0%)
Frame = +3
Query: 63 SAITNPTFKTSSQNVTTTSSAEKXXXXXXXXXXXXXNKVAADSLQYETGFLGAVPEKLKE 242
S TN T TSS TT+SS+ NKV+ +SLQY G+LGAVP++
Sbjct: 57 SPTTNST--TSSAASTTSSSSSTTVSSIFL------NKVSPNSLQYPPGYLGAVPDRAVN 108
Query: 243 DD--DGCPSTLWYLTSILSSKVYDVAIESPLDHAKKLSDRLGVKFLLKREDLQPVFSFKL 416
++ + + + YLT+ILSSKVYDVAIESPL A KLS+RL VK LKREDLQPVFSFKL
Sbjct: 109 NNGANDIINAMGYLTNILSSKVYDVAIESPLQFAPKLSERLKVKVWLKREDLQPVFSFKL 168
Query: 417 RGAYNMMAKLPRDQLDRGVICSSAGNHAQGVALAACKLGCDAVIVMPVTTPGIKVESVQK 596
RGAYNMMAKL ++QL++GVICSSAGNHAQGVALAA +LGC+AVI MP+TTP IK +SV++
Sbjct: 169 RGAYNMMAKLSKEQLEKGVICSSAGNHAQGVALAAKRLGCNAVIAMPITTPEIKWQSVER 228
Query: 597 LGATVVLKGDSYDEAQAHAKQRSDLEGRTFIPPFDHPDVIAGQGTVGLEILRQANGPLHA 776
LGATVVL GDSYDEAQ +AK+R+ EGRTFIPPFDHPDVI GQGTVG+EI+RQ P+HA
Sbjct: 229 LGATVVLVGDSYDEAQTYAKKRAKEEGRTFIPPFDHPDVIMGQGTVGMEIVRQIQAPMHA 288
Query: 777 VFVPVXXXXXXXXXXXXXKQVAPEVKIIGVEPADANALALSFHHGQRVMLEQAGGFADGV 956
+FVPV K+V PEVKIIGVEP+DANA+ALS HHG+RVML+Q GGFADGV
Sbjct: 289 IFVPVGGGGLIAGIAAYVKRVNPEVKIIGVEPSDANAMALSLHHGERVMLDQVGGFADGV 348
Query: 957 AVKVVGEETFRLCRELVDGVVLVSKDAICASIKDMFEEKRSXXXXXXXXXXXXXXXYCKY 1136
AVK VGEETFRLC+EL+DGVVLVS+DAICASIKDMFEEKRS YCKY
Sbjct: 349 AVKEVGEETFRLCKELIDGVVLVSRDAICASIKDMFEEKRSILEPAGALALAGAEAYCKY 408
Query: 1137 YGLKNETVVAIASGANMNFSTLKLVAELADIGRQREAVLSTCMPEEPGSFKRFCELVGPK 1316
YGL+ + VVAI SGANMNF L++V ELA++GRQ+EAVL+T MPEEPG FKRFCELVGP
Sbjct: 409 YGLEGKNVVAITSGANMNFDKLRIVTELANVGRQQEAVLATVMPEEPGMFKRFCELVGP- 467
Query: 1317 MNITEFKYRCDGTDKAVVLYSVGLHTVSELTALVNRMEYSQLETENYTSNGLVKDHLRHL 1496
MNITEFKYRC +AVVLYSVGLHTV E+ AL RME SQL T N TS+ LVKDHLR+L
Sbjct: 468 MNITEFKYRCSSEKEAVVLYSVGLHTVFEIQALQQRMEASQLRTYNLTSSDLVKDHLRYL 527
Query: 1497 IGSGRSMLPRDERLFRFVFPERPGALMKFLDAFSPRWNISLFHYRAQGETGANVLVGMQV 1676
+G ++ ++E L +FVFPERPGALMKFLDAFSPRWNISLFHYR QGETGAN+LVG+QV
Sbjct: 528 MGGRLNV--QNEVLCQFVFPERPGALMKFLDAFSPRWNISLFHYRGQGETGANILVGIQV 585
Query: 1677 LDSELDEFHSCANCLGFDYTDETYNPGRDLLM 1772
+SE++EFHS AN +G+ Y T + LLM
Sbjct: 586 PESEMEEFHSRANSVGYGYVVVTDDNNFQLLM 617
>ref|XP_002884774.1| L-O-methylthreonine resistant 1 [Arabidopsis lyrata subsp. lyrata]
gi|297330614|gb|EFH61033.1| L-O-methylthreonine resistant
1 [Arabidopsis lyrata subsp. lyrata]
Length = 591
Score = 706 bits (1822), Expect = 0.0
Identities = 365/521 (70%), Positives = 421/521 (80%), Gaps = 1/521 (0%)
Frame = +3
Query: 174 KVAADSLQYETGFLGAVPEKLKEDDDGC-PSTLWYLTSILSSKVYDVAIESPLDHAKKLS 350
KV+ +SLQY G+LGAVPE+ E ++G + YLT+ILS+KVYD+AIESPL AKKLS
Sbjct: 60 KVSPNSLQYPAGYLGAVPERTNEPENGSIVEAMEYLTNILSTKVYDIAIESPLQLAKKLS 119
Query: 351 DRLGVKFLLKREDLQPVFSFKLRGAYNMMAKLPRDQLDRGVICSSAGNHAQGVALAACKL 530
RLGV+ LKREDLQPVFSFKLRGAYNMM KLP DQL +GVICSSAGNHAQGVAL+A KL
Sbjct: 120 KRLGVRMFLKREDLQPVFSFKLRGAYNMMVKLPADQLAKGVICSSAGNHAQGVALSASKL 179
Query: 531 GCDAVIVMPVTTPGIKVESVQKLGATVVLKGDSYDEAQAHAKQRSDLEGRTFIPPFDHPD 710
GC AVIVMPVTTP IK ++V+ LGATVVL GDSYD+AQAHAK R++ EG TFIPPFDHPD
Sbjct: 180 GCTAVIVMPVTTPEIKWQAVENLGATVVLFGDSYDQAQAHAKIRAEEEGLTFIPPFDHPD 239
Query: 711 VIAGQGTVGLEILRQANGPLHAVFVPVXXXXXXXXXXXXXKQVAPEVKIIGVEPADANAL 890
VIAGQGTVG+EI RQA GPLHA+FVPV K+VAPEVKIIGVEPADANA+
Sbjct: 240 VIAGQGTVGMEITRQAKGPLHAIFVPVGGGGLIAGIAAYVKRVAPEVKIIGVEPADANAM 299
Query: 891 ALSFHHGQRVMLEQAGGFADGVAVKVVGEETFRLCRELVDGVVLVSKDAICASIKDMFEE 1070
ALS HHG+RV+L+Q GGFADGVAVK VGEETFR+ R L+DGVVLV++DAICASIKDMFEE
Sbjct: 300 ALSLHHGERVILDQVGGFADGVAVKEVGEETFRISRNLMDGVVLVTRDAICASIKDMFEE 359
Query: 1071 KRSXXXXXXXXXXXXXXXYCKYYGLKNETVVAIASGANMNFSTLKLVAELADIGRQREAV 1250
KR+ YCKYYGLK+ VVAI SGANMNF L++V ELA++GRQ+EAV
Sbjct: 360 KRNILEPAGALALAGAEAYCKYYGLKDVNVVAITSGANMNFDKLRIVTELANVGRQQEAV 419
Query: 1251 LSTCMPEEPGSFKRFCELVGPKMNITEFKYRCDGTDKAVVLYSVGLHTVSELTALVNRME 1430
L+T MPE+PGSFK+FCELVGP MNITEFKYRC+ +AVVLYSVG+HT EL AL RME
Sbjct: 420 LATLMPEKPGSFKQFCELVGP-MNITEFKYRCNSEKEAVVLYSVGVHTAGELKALQKRME 478
Query: 1431 YSQLETENYTSNGLVKDHLRHLIGSGRSMLPRDERLFRFVFPERPGALMKFLDAFSPRWN 1610
SQL T N T++ LVKDHLR+L+G GRS + DE L RF FPERPGALM FLD+FSPRWN
Sbjct: 479 SSQLRTVNLTTSDLVKDHLRYLMG-GRSTV-GDEVLCRFTFPERPGALMNFLDSFSPRWN 536
Query: 1611 ISLFHYRAQGETGANVLVGMQVLDSELDEFHSCANCLGFDY 1733
I+LFHYR QGETGANVLVG+QV + E++EF + A LG+DY
Sbjct: 537 ITLFHYRGQGETGANVLVGIQVPEQEMEEFKNRAKALGYDY 577
>ref|NP_187616.1| threonine dehydratase biosynthetic [Arabidopsis thaliana]
gi|17369978|sp|Q9ZSS6.1|THD1_ARATH RecName:
Full=Threonine dehydratase biosynthetic, chloroplastic;
AltName: Full=Threonine deaminase; Short=TD; Flags:
Precursor gi|6143871|gb|AAF04418.1|AC010927_11 threonine
dehydratase/deaminase (OMR1) [Arabidopsis thaliana]
gi|6942237|gb|AAF32370.1|AF221984_1 threonine
dehydratase/deaminase [Arabidopsis thaliana]
gi|3800878|gb|AAC97936.1| threonine dehydratase/deaminase
[Arabidopsis thaliana] gi|18086439|gb|AAL57674.1|
AT3g10050/T22K18_12 [Arabidopsis thaliana]
gi|332641333|gb|AEE74854.1| threonine dehydratase
biosynthetic [Arabidopsis thaliana]
Length = 592
Score = 703 bits (1815), Expect = 0.0
Identities = 365/529 (68%), Positives = 425/529 (80%), Gaps = 4/529 (0%)
Frame = +3
Query: 174 KVAADSLQYETGFLGAVPEKLKEDDDGC-PSTLWYLTSILSSKVYDVAIESPLDHAKKLS 350
KV+ +SLQY G+LGAVPE+ E ++G + YLT+ILS+KVYD+AIESPL AKKLS
Sbjct: 61 KVSPNSLQYPAGYLGAVPERTNEAENGSIAEAMEYLTNILSTKVYDIAIESPLQLAKKLS 120
Query: 351 DRLGVKFLLKREDLQPVFSFKLRGAYNMMAKLPRDQLDRGVICSSAGNHAQGVALAACKL 530
RLGV+ LKREDLQPVFSFKLRGAYNMM KLP DQL +GVICSSAGNHAQGVAL+A KL
Sbjct: 121 KRLGVRMYLKREDLQPVFSFKLRGAYNMMVKLPADQLAKGVICSSAGNHAQGVALSASKL 180
Query: 531 GCDAVIVMPVTTPGIKVESVQKLGATVVLKGDSYDEAQAHAKQRSDLEGRTFIPPFDHPD 710
GC AVIVMPVTTP IK ++V+ LGATVVL GDSYD+AQAHAK R++ EG TFIPPFDHPD
Sbjct: 181 GCTAVIVMPVTTPEIKWQAVENLGATVVLFGDSYDQAQAHAKIRAEEEGLTFIPPFDHPD 240
Query: 711 VIAGQGTVGLEILRQANGPLHAVFVPVXXXXXXXXXXXXXKQVAPEVKIIGVEPADANAL 890
VIAGQGTVG+EI RQA GPLHA+FVPV K+V+PEVKIIGVEPADANA+
Sbjct: 241 VIAGQGTVGMEITRQAKGPLHAIFVPVGGGGLIAGIAAYVKRVSPEVKIIGVEPADANAM 300
Query: 891 ALSFHHGQRVMLEQAGGFADGVAVKVVGEETFRLCRELVDGVVLVSKDAICASIKDMFEE 1070
ALS HHG+RV+L+Q GGFADGVAVK VGEETFR+ R L+DGVVLV++DAICASIKDMFEE
Sbjct: 301 ALSLHHGERVILDQVGGFADGVAVKEVGEETFRISRNLMDGVVLVTRDAICASIKDMFEE 360
Query: 1071 KRSXXXXXXXXXXXXXXXYCKYYGLKNETVVAIASGANMNFSTLKLVAELADIGRQREAV 1250
KR+ YCKYYGLK+ VVAI SGANMNF L++V ELA++GRQ+EAV
Sbjct: 361 KRNILEPAGALALAGAEAYCKYYGLKDVNVVAITSGANMNFDKLRIVTELANVGRQQEAV 420
Query: 1251 LSTCMPEEPGSFKRFCELVGPKMNITEFKYRCDGTDKAVVLYSVGLHTVSELTALVNRME 1430
L+T MPE+PGSFK+FCELVGP MNI+EFKYRC +AVVLYSVG+HT EL AL RME
Sbjct: 421 LATLMPEKPGSFKQFCELVGP-MNISEFKYRCSSEKEAVVLYSVGVHTAGELKALQKRME 479
Query: 1431 YSQLETENYTSNGLVKDHLRHLIGSGRSMLPRDERLFRFVFPERPGALMKFLDAFSPRWN 1610
SQL+T N T++ LVKDHLR+L+G GRS + DE L RF FPERPGALM FLD+FSPRWN
Sbjct: 480 SSQLKTVNLTTSDLVKDHLRYLMG-GRSTV-GDEVLCRFTFPERPGALMNFLDSFSPRWN 537
Query: 1611 ISLFHYRAQGETGANVLVGMQVLDSELDEFHSCANCLGFDY---TDETY 1748
I+LFHYR QGETGANVLVG+QV + E++EF + A LG+DY +D+ Y
Sbjct: 538 ITLFHYRGQGETGANVLVGIQVPEQEMEEFKNRAKALGYDYFLVSDDDY 586