BLASTX nr result

ID: Coptis23_contig00010325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010325
         (1190 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313979.1| predicted protein [Populus trichocarpa] gi|2...   338   2e-90
ref|XP_002278599.2| PREDICTED: uncharacterized protein LOC100260...   327   3e-87
ref|XP_002516645.1| protein binding protein, putative [Ricinus c...   324   2e-86
ref|XP_002298491.1| predicted protein [Populus trichocarpa] gi|2...   321   3e-85
emb|CBI15919.3| unnamed protein product [Vitis vinifera]              318   2e-84

>ref|XP_002313979.1| predicted protein [Populus trichocarpa] gi|222850387|gb|EEE87934.1|
           predicted protein [Populus trichocarpa]
          Length = 265

 Score =  338 bits (867), Expect = 2e-90
 Identities = 177/265 (66%), Positives = 209/265 (78%), Gaps = 1/265 (0%)
 Frame = +3

Query: 132 KSSHSKAXXXXXXXXXXXXXXXRPGGMLVQKRDDEGVGDLGPMIKIKLYYGSSVLDINVP 311
           KSS SK                RPGGMLVQKRD  GVG  GPMIKIK+ +GS   D +VP
Sbjct: 2   KSSTSKGTETREFNYREIDWELRPGGMLVQKRD-VGVGSSGPMIKIKVSHGSCHYDTDVP 60

Query: 312 AQATFGDLKRILAHETGLEPKEQRLLFRGKEREDEECLHMVGVKDMSKVVLLEDPASRER 491
           AQ+TFGDLK++LA+ETGLEP+EQRLLFRGKERE++E LHMVGVKDMSKV+L EDPAS+ER
Sbjct: 61  AQSTFGDLKKVLANETGLEPQEQRLLFRGKERENDEYLHMVGVKDMSKVILFEDPASKER 120

Query: 492 KLEEMKKNQEISKACEPINKVRAEVDRLAEKASILESAVRNGTKVDEKEFVVLTELFMVQ 671
           KLEEMK+NQ   +ACE + +VRAEVD+L EK   LE+   +GT + +KEFVVLTEL M+Q
Sbjct: 121 KLEEMKRNQGTFEACEAVARVRAEVDKLCEKVVALETTFCSGTAIADKEFVVLTELLMIQ 180

Query: 672 LLKLDGIEAEGEARAQRRTEVRRVQSLVETLDTLKARNSNPFSDSSNAVSLTTKWEKFDS 851
           LLKLD IEA GEA+ QRR EVRR+QS V+TLD LK RNSNPFS+SS+AVS+TTKWE F S
Sbjct: 181 LLKLDSIEANGEAKVQRRIEVRRIQSFVDTLDNLKVRNSNPFSNSSSAVSVTTKWETFAS 240

Query: 852 GVGSLSAPPPV-SSSEATQDWESFD 923
           GVGSLSAP P+ S+++ TQDWE FD
Sbjct: 241 GVGSLSAPVPIQSATKVTQDWELFD 265


>ref|XP_002278599.2| PREDICTED: uncharacterized protein LOC100260376 [Vitis vinifera]
          Length = 264

 Score =  327 bits (839), Expect = 3e-87
 Identities = 171/243 (70%), Positives = 203/243 (83%), Gaps = 1/243 (0%)
 Frame = +3

Query: 198 RPGGMLVQKRDDEGVGDLGPMIKIKLYYGSSVLDINVPAQATFGDLKRILAHETGLEPKE 377
           RPGGMLVQKR+  G     PMIKIK+ +GS    I +PAQ+TFGDLKR+LAHETGLEPKE
Sbjct: 23  RPGGMLVQKRN-AGDAASSPMIKIKVSHGSYHHYITIPAQSTFGDLKRVLAHETGLEPKE 81

Query: 378 QRLLFRGKEREDEECLHMVGVKDMSKVVLLEDPASRERKLEEMKKNQEISKACEPINKVR 557
           QRLLFRGKE+E++ECLHMVGVK+MSKV+LLEDPAS+E+KLEEMKK+Q I KA E +  VR
Sbjct: 82  QRLLFRGKEKENDECLHMVGVKEMSKVILLEDPASKEKKLEEMKKDQGILKAYEAVALVR 141

Query: 558 AEVDRLAEKASILESAVRNGTKVDEKEFVVLTELFMVQLLKLDGIEAEGEARAQRRTEVR 737
            EVD+L+EK   LE AVR G KV +KEFVVLTEL MVQLL+LD IEA+GEA+ QRR EV 
Sbjct: 142 VEVDKLSEKIVALERAVRGGNKVVDKEFVVLTELLMVQLLQLDTIEADGEAKVQRRIEVC 201

Query: 738 RVQSLVETLDTLKARNSNPFSDSSNAVSLTTKWEKFDSGVGSLSAPPPV-SSSEATQDWE 914
           R+QS V+TLD LKARNSNPF++S+NAVS+TTKW  F+SG+GSLSAP P+ SS++ TQDWE
Sbjct: 202 RIQSFVDTLDNLKARNSNPFNNSTNAVSVTTKWVAFESGIGSLSAPTPLQSSTKITQDWE 261

Query: 915 SFD 923
            FD
Sbjct: 262 LFD 264


>ref|XP_002516645.1| protein binding protein, putative [Ricinus communis]
           gi|223544217|gb|EEF45740.1| protein binding protein,
           putative [Ricinus communis]
          Length = 265

 Score =  324 bits (831), Expect = 2e-86
 Identities = 170/265 (64%), Positives = 202/265 (76%), Gaps = 1/265 (0%)
 Frame = +3

Query: 132 KSSHSKAXXXXXXXXXXXXXXXRPGGMLVQKRDDEGVGDLGPMIKIKLYYGSSVLDINVP 311
           K S SK                RPGGMLVQKR+  G G  GPMIKIK+ +GS   ++ VP
Sbjct: 2   KKSPSKGLEASVLNCRQIDWELRPGGMLVQKRE-VGDGSSGPMIKIKVSHGSYHYEVTVP 60

Query: 312 AQATFGDLKRILAHETGLEPKEQRLLFRGKEREDEECLHMVGVKDMSKVVLLEDPASRER 491
           AQ+TFGDLK++L HE GLE +EQRLLFRGKE+ED ECLHM GVKD+SKV+LLEDPA +ER
Sbjct: 61  AQSTFGDLKKVLVHEAGLEAEEQRLLFRGKEKEDNECLHMEGVKDLSKVILLEDPACKER 120

Query: 492 KLEEMKKNQEISKACEPINKVRAEVDRLAEKASILESAVRNGTKVDEKEFVVLTELFMVQ 671
           KLEEMKKN+ I KACE + +VRAEVD+L++K   LE+ V +GT V EKEF+VLTEL MVQ
Sbjct: 121 KLEEMKKNEAILKACEAVARVRAEVDKLSQKVVTLETTVSSGTLVAEKEFIVLTELLMVQ 180

Query: 672 LLKLDGIEAEGEARAQRRTEVRRVQSLVETLDTLKARNSNPFSDSSNAVSLTTKWEKFDS 851
           LLKLD IEA+GEA+ QRR EVRRVQS V+ LD LKARNSN  S+SSN VS+T KWE FDS
Sbjct: 181 LLKLDMIEADGEAKVQRRIEVRRVQSFVDALDKLKARNSNTLSNSSNEVSVTAKWETFDS 240

Query: 852 GVGSLSAPPPV-SSSEATQDWESFD 923
           GVGS+S P  + S+++ TQDWE FD
Sbjct: 241 GVGSVSTPVSIQSATKVTQDWELFD 265


>ref|XP_002298491.1| predicted protein [Populus trichocarpa] gi|222845749|gb|EEE83296.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score =  321 bits (822), Expect = 3e-85
 Identities = 165/243 (67%), Positives = 199/243 (81%), Gaps = 1/243 (0%)
 Frame = +3

Query: 198 RPGGMLVQKRDDEGVGDLGPMIKIKLYYGSSVLDINVPAQATFGDLKRILAHETGLEPKE 377
           RPGGMLVQK D  G G  GPMIKIK+ +G    DI VPAQ+TFGDLK++LAHETGLE KE
Sbjct: 22  RPGGMLVQKMD-VGDGSSGPMIKIKVSHGLCHYDIAVPAQSTFGDLKKVLAHETGLESKE 80

Query: 378 QRLLFRGKEREDEECLHMVGVKDMSKVVLLEDPASRERKLEEMKKNQEISKACEPINKVR 557
           QRLLF+GKE+E++E LHMVGVKDMSKV+L EDPAS+ERKLEEMK+NQ+  KA E + +VR
Sbjct: 81  QRLLFKGKEKENDEYLHMVGVKDMSKVILFEDPASKERKLEEMKRNQDTLKAYEAVARVR 140

Query: 558 AEVDRLAEKASILESAVRNGTKVDEKEFVVLTELFMVQLLKLDGIEAEGEARAQRRTEVR 737
           AEVD+L EK   LE+ +R+GTK+ EKEF VLTEL M+QLLKLD IEA+G+A+ QR+ EVR
Sbjct: 141 AEVDKLCEKVVALETNIRSGTKIAEKEFSVLTELLMIQLLKLDSIEADGQAKVQRKIEVR 200

Query: 738 RVQSLVETLDTLKARNSNPFSDSSNAVSLTTKWEKFDSGVGSLSAPPPV-SSSEATQDWE 914
           R+QS V+TL+ LK RNS  FS +SNAVS+TTKWE F SGVGSLSAP P+ S+++  QDWE
Sbjct: 201 RIQSFVDTLENLKVRNSKSFSHNSNAVSVTTKWETFASGVGSLSAPVPLQSATKLNQDWE 260

Query: 915 SFD 923
            FD
Sbjct: 261 LFD 263


>emb|CBI15919.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score =  318 bits (815), Expect = 2e-84
 Identities = 167/239 (69%), Positives = 199/239 (83%), Gaps = 1/239 (0%)
 Frame = +3

Query: 210 MLVQKRDDEGVGDLGPMIKIKLYYGSSVLDINVPAQATFGDLKRILAHETGLEPKEQRLL 389
           MLVQKR+  G     PMIKIK+ +GS    I +PAQ+TFGDLKR+LAHETGLEPKEQRLL
Sbjct: 1   MLVQKRN-AGDAASSPMIKIKVSHGSYHHYITIPAQSTFGDLKRVLAHETGLEPKEQRLL 59

Query: 390 FRGKEREDEECLHMVGVKDMSKVVLLEDPASRERKLEEMKKNQEISKACEPINKVRAEVD 569
           FRGKE+E++ECLHMVGVK+MSKV+LLEDPAS+E+KLEEMKK+Q I KA E +  VR EVD
Sbjct: 60  FRGKEKENDECLHMVGVKEMSKVILLEDPASKEKKLEEMKKDQGILKAYEAVALVRVEVD 119

Query: 570 RLAEKASILESAVRNGTKVDEKEFVVLTELFMVQLLKLDGIEAEGEARAQRRTEVRRVQS 749
           +L+EK   LE AVR G KV +KEFVVLTEL MVQLL+LD IEA+GEA+ QRR EV R+QS
Sbjct: 120 KLSEKIVALERAVRGGNKVVDKEFVVLTELLMVQLLQLDTIEADGEAKVQRRIEVCRIQS 179

Query: 750 LVETLDTLKARNSNPFSDSSNAVSLTTKWEKFDSGVGSLSAPPPV-SSSEATQDWESFD 923
            V+TLD LKARNSNPF++S+NAVS+TTKW  F+SG+GSLSAP P+ SS++ TQDWE FD
Sbjct: 180 FVDTLDNLKARNSNPFNNSTNAVSVTTKWVAFESGIGSLSAPTPLQSSTKITQDWELFD 238


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