BLASTX nr result
ID: Coptis23_contig00010318
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00010318
(2026 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002302785.1| predicted protein [Populus trichocarpa] gi|2... 142 4e-31
ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243... 127 1e-26
emb|CBI36980.3| unnamed protein product [Vitis vinifera] 127 1e-26
emb|CAN64022.1| hypothetical protein VITISV_005264 [Vitis vinifera] 127 1e-26
ref|XP_002531983.1| RNA binding protein, putative [Ricinus commu... 113 2e-22
>ref|XP_002302785.1| predicted protein [Populus trichocarpa] gi|222844511|gb|EEE82058.1|
predicted protein [Populus trichocarpa]
Length = 919
Score = 142 bits (357), Expect = 4e-31
Identities = 180/721 (24%), Positives = 300/721 (41%), Gaps = 63/721 (8%)
Frame = +1
Query: 46 LRGYVDFAHLRPVPPK-GTGPFHLNEEVNAYNNDGWWKGVIIKILKEGSRYLVFFKPTKE 222
++ VDF H+RP PP + L E V+ GW GVI K+L G RY VFFK E
Sbjct: 234 MKTIVDFLHIRPTPPLYADRNYELLERVDTRYGFGWRSGVITKLLA-GRRYNVFFKHGNE 292
Query: 223 ELEFDLSNLRSHLDWVD---------------------------GKWITSPNQETAVSSQ 321
+ E S +R HL+WVD G+W P+ E + S
Sbjct: 293 DKELSHSKIRPHLEWVDGKWISKSKQVAVVRYGVGYTSRFVPMCGRWRPFPDSEVRIVSD 352
Query: 322 NNGCDQFPNPTGSSALSIDIALSQTLCGARDIMLERSSLRNMYGSVDNQSTSNGIYLPLQ 501
+ G QF S + + L + A D E++ N+ + QS +G
Sbjct: 353 SQG--QFVGTDSSDNPDVAVKLKSS-SAAEDKTKEKTVSTNIRDPTE-QSMHSG------ 402
Query: 502 VLYPSQENRKKSTPRSAAGALRTSKKIGKRKATDAQTFIEVFQARRTSTGSGSDAKYMLP 681
+ K T + G+ ++ + TD +V + +
Sbjct: 403 ---EKSVKKLKLTLYNGGGSCSSASSM----LTDKTKLHKVLELDCPK----------VD 445
Query: 682 FPTTKGKRSKVLKRRARVPISSELILWPNLREAEDPEVIGFTKSDVQRQTKLHDVLLAGK 861
T KG+ +K R P SS + +A + V G ++SDV+ + +++ K
Sbjct: 446 IVTRKGRATK---SPFRSPNSSAAV---KDGDAVEVTVQGISESDVKTKEIEVPLIIGLK 499
Query: 862 MREPLYNTGINLKGVKRVRNQRK--------KIVKRKRESSISSVLENGFASKETKDCRT 1017
E +Y + +K +R+Q+K K + RKR S +SV F +E +
Sbjct: 500 AIEGIYQDDKEM--LKLMRDQKKGLNDSAKDKNMVRKRFLS-ASVFVWLFNGREKES--- 553
Query: 1018 DCTPMLSTHIGEEYCSLCLSLDKPNSQVVKYSEGATDKQTVAVLDRISGRPKGSCEKSTV 1197
+ TH C+SL + K G++ + R GRP+ S
Sbjct: 554 -----IGTH------GSCISLPL---ECAKEYVGSSQR-------RKRGRPRKLIINSKA 592
Query: 1198 EGSEHEVASDRMT--VVPIKHRPLSLLEMSNSPIVKDNEGVSRNSQVISNKAITLIDASM 1371
+ + S + VV + + L+ E+ + VS+NS + I+ D
Sbjct: 593 LVASKDFGSVDLADEVVQVVIKDLTTNEVEWPTQARAEPKVSQNSSREKSSEISKTDFMS 652
Query: 1372 EQFPNETNIVKILSFAEGDQ---YQYGNR-----------SEDEIASHMVNITTNSFLS- 1506
+ + K + A+ DQ +GN S IAS + ++
Sbjct: 653 READADAAASK--NVADDDQPLSTWFGNMHGSAGLEELRLSTGRIASGVSEAREKKVVAV 710
Query: 1507 ---PIQHNEGSLPPDVRRLPFIKSSILWGILESFEVFKFMPQQPHFRPLEQYNEELREGF 1677
+ + + +PF+K S +W +ES EVF+ +PQ+PHF PL + EE REG
Sbjct: 711 QSCTVDPKSNDTMVENQLVPFVKKSPVWNTIESMEVFQIIPQKPHFHPLTECKEEYREGS 770
Query: 1678 AIAHVVNFNNLVGRTWNANLDEPRIMFQNKLEALNDLEGAGFTVQPVRARLEELLRIKDS 1857
AI +V F +L + + D+ R + ++ LE+L DLE GF + R RL ELL IKD
Sbjct: 771 AIGIMVTFASLFEKISSLQFDDCRSILESTLESLVDLEKHGFDITVPRCRLNELLSIKDG 830
Query: 1858 YSQLDDKSKIAETKV---IEEKRKVDQ----VQESIKQLNIKLQTLMREKEMKTFNITEQ 2016
++ ++SK AE K+ +EKRK+++ +++ I +L +L + ++K +I++
Sbjct: 831 QGEVINESKDAEEKIRVHTDEKRKLEEKMSDIEKKITELQEELALTKAKMDVKGLDISKM 890
Query: 2017 R 2019
+
Sbjct: 891 Q 891
Score = 86.3 bits (212), Expect = 3e-14
Identities = 45/106 (42%), Positives = 61/106 (57%), Gaps = 4/106 (3%)
Frame = +1
Query: 13 TILKETESEKLLRGYVDFAHLRPVPP----KGTGPFHLNEEVNAYNNDGWWKGVIIKILK 180
T++ E S L+ VD +RP+PP K G F NE ++A DGWW GV+ K+L
Sbjct: 79 TLVTEDGSAPLVE-QVDPHLIRPLPPQYLLKNGGLFQENEAIDASLRDGWWSGVVKKVLD 137
Query: 181 EGSRYLVFFKPTKEELEFDLSNLRSHLDWVDGKWITSPNQETAVSS 318
GSRY+V+F + +EF+ +LR HLDWVDG W+ Q A S
Sbjct: 138 GGSRYMVYFDNPPDVVEFEAKDLRLHLDWVDGNWVQPQMQRQATGS 183
>ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243428 [Vitis vinifera]
Length = 1214
Score = 127 bits (319), Expect = 1e-26
Identities = 62/151 (41%), Positives = 96/151 (63%)
Frame = +1
Query: 1552 LPFIKSSILWGILESFEVFKFMPQQPHFRPLEQYNEELREGFAIAHVVNFNNLVGRTWNA 1731
LPF+KSS +W LE+ EVF+ MPQ+PHFRPLE EE REG AI ++V F+ L+ +
Sbjct: 1027 LPFVKSSPIWNTLETLEVFQRMPQKPHFRPLENCKEERREGLAIGNMVTFSTLIEKVAKL 1086
Query: 1732 NLDEPRIMFQNKLEALNDLEGAGFTVQPVRARLEELLRIKDSYSQLDDKSKIAETKVIEE 1911
D+PR +F + LEAL +LE GF +PV++R+ EL+ IKD QL ++K E +++E
Sbjct: 1087 RFDDPRSIFGSSLEALVELEMHGFDTKPVQSRINELVFIKDQQEQLKGRTKEVENQIMEH 1146
Query: 1912 KRKVDQVQESIKQLNIKLQTLMREKEMKTFN 2004
+ ++ E I +++ K+ L ++ + N
Sbjct: 1147 THEKTKIDEEIYEIDKKMIELQEKRALAVSN 1177
Score = 90.5 bits (223), Expect = 2e-15
Identities = 62/213 (29%), Positives = 104/213 (48%), Gaps = 7/213 (3%)
Frame = +1
Query: 19 LKETESEKLLRGYVDFAHLRPVPPKGTG-PFHLNEEVNAYNNDGWWKGVIIKILKEGSRY 195
LK + +L VD H+RP PP+ G F L E+V+A+ + GWW G++ K+L G RY
Sbjct: 326 LKNSGEAGVLDVTVDNLHIRPSPPRLEGRKFGLLEKVDAFYDYGWWNGIVTKVLT-GRRY 384
Query: 196 LVFFKPTKEELEFDLSNLRSHLDWVDGKWITSPNQETAVSSQNNGCDQFPNPTGSSALSI 375
+VFFK T E EF S+LR H++WVDGKW+ + + + + N + ++++ +
Sbjct: 385 VVFFKHTNMEKEFIHSDLRPHMEWVDGKWVGATQEVLGTTYSDEQLGLVLNNSNNTSVGM 444
Query: 376 DIALSQTLCG------ARDIMLERSSLRNMYGSVDNQSTSNGIYLPLQVLYPSQENRKKS 537
+ S T+ + E+ L ++N ++ V+ +++ K++
Sbjct: 445 QLESSGTVIDDAGDKISHSTRFEKDRLEQPATYLENSTS---------VMTSNRKKVKET 495
Query: 538 TPRSAAGALRTSKKIGKRKATDAQTFIEVFQAR 636
T A R SKK+ + DA V Q R
Sbjct: 496 TSGDDATPSRPSKKLKEGDVADAPISHAVGQLR 528
Score = 80.9 bits (198), Expect = 1e-12
Identities = 43/100 (43%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Frame = +1
Query: 16 ILKETESEKLLRGYVDFAHLRPVPP-KGTGPFHLNEEVNAYNNDGWWKGVIIKILKEGSR 192
+L + K L VD + LRP+PP + F +N+ V+A+ DGWW GVI +I E S+
Sbjct: 54 LLVDDVGSKPLTEVVDTSFLRPLPPPEADTNFCVNDIVDAFYRDGWWTGVITRI-SEDSK 112
Query: 193 YLVFFKPTKEELEFDLSNLRSHLDWVDGKWITSPNQETAV 312
VFF+ +E++FD S+LR H +WVDGKWI Q + V
Sbjct: 113 CTVFFQNPPDEIQFDRSDLRVHKEWVDGKWIRPEKQVSFV 152
Score = 65.5 bits (158), Expect = 5e-08
Identities = 38/98 (38%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Frame = +1
Query: 16 ILKETESEKLLRGYVDFAHLRPVPPKGTGP-FHLNEEVNAYNNDGWWKGVIIKILKEGSR 192
+L + + LR VD LRP+PP T F + V+ + +DGW GVII I + S+
Sbjct: 188 LLDGKDGSRRLREVVDTLFLRPLPPLETNASFGEYDIVDTFYHDGWCTGVIICI--KDSK 245
Query: 193 YLVFFKPTKEELEFDLSNLRSHLDWVDGKWITSPNQET 306
Y VFF + E++ D S+LR H +WV+GKW+ + T
Sbjct: 246 YTVFF--SNNEIQVDRSDLRLHKEWVNGKWVQPRKERT 281
>emb|CBI36980.3| unnamed protein product [Vitis vinifera]
Length = 1074
Score = 127 bits (319), Expect = 1e-26
Identities = 62/151 (41%), Positives = 96/151 (63%)
Frame = +1
Query: 1552 LPFIKSSILWGILESFEVFKFMPQQPHFRPLEQYNEELREGFAIAHVVNFNNLVGRTWNA 1731
LPF+KSS +W LE+ EVF+ MPQ+PHFRPLE EE REG AI ++V F+ L+ +
Sbjct: 887 LPFVKSSPIWNTLETLEVFQRMPQKPHFRPLENCKEERREGLAIGNMVTFSTLIEKVAKL 946
Query: 1732 NLDEPRIMFQNKLEALNDLEGAGFTVQPVRARLEELLRIKDSYSQLDDKSKIAETKVIEE 1911
D+PR +F + LEAL +LE GF +PV++R+ EL+ IKD QL ++K E +++E
Sbjct: 947 RFDDPRSIFGSSLEALVELEMHGFDTKPVQSRINELVFIKDQQEQLKGRTKEVENQIMEH 1006
Query: 1912 KRKVDQVQESIKQLNIKLQTLMREKEMKTFN 2004
+ ++ E I +++ K+ L ++ + N
Sbjct: 1007 THEKTKIDEEIYEIDKKMIELQEKRALAVSN 1037
Score = 90.5 bits (223), Expect = 2e-15
Identities = 62/213 (29%), Positives = 104/213 (48%), Gaps = 7/213 (3%)
Frame = +1
Query: 19 LKETESEKLLRGYVDFAHLRPVPPKGTG-PFHLNEEVNAYNNDGWWKGVIIKILKEGSRY 195
LK + +L VD H+RP PP+ G F L E+V+A+ + GWW G++ K+L G RY
Sbjct: 195 LKNSGEAGVLDVTVDNLHIRPSPPRLEGRKFGLLEKVDAFYDYGWWNGIVTKVLT-GRRY 253
Query: 196 LVFFKPTKEELEFDLSNLRSHLDWVDGKWITSPNQETAVSSQNNGCDQFPNPTGSSALSI 375
+VFFK T E EF S+LR H++WVDGKW+ + + + + N + ++++ +
Sbjct: 254 VVFFKHTNMEKEFIHSDLRPHMEWVDGKWVGATQEVLGTTYSDEQLGLVLNNSNNTSVGM 313
Query: 376 DIALSQTLCG------ARDIMLERSSLRNMYGSVDNQSTSNGIYLPLQVLYPSQENRKKS 537
+ S T+ + E+ L ++N ++ V+ +++ K++
Sbjct: 314 QLESSGTVIDDAGDKISHSTRFEKDRLEQPATYLENSTS---------VMTSNRKKVKET 364
Query: 538 TPRSAAGALRTSKKIGKRKATDAQTFIEVFQAR 636
T A R SKK+ + DA V Q R
Sbjct: 365 TSGDDATPSRPSKKLKEGDVADAPISHAVGQLR 397
Score = 82.4 bits (202), Expect = 4e-13
Identities = 43/98 (43%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Frame = +1
Query: 16 ILKETESEKLLRGYVDFAHLRPVPP-KGTGPFHLNEEVNAYNNDGWWKGVIIKILKEGSR 192
+L + K L VD + LRP+PP + F +N+ V+A+ DGWW GVI +I E S+
Sbjct: 54 LLVDDVGSKPLTEVVDTSFLRPLPPPEADTNFCVNDIVDAFYRDGWWTGVITRI-SEDSK 112
Query: 193 YLVFFKPTKEELEFDLSNLRSHLDWVDGKWITSPNQET 306
VFF+ +E++FD S+LR H +WVDGKWI Q T
Sbjct: 113 CTVFFQNPPDEIQFDRSDLRVHKEWVDGKWIRPEKQRT 150
>emb|CAN64022.1| hypothetical protein VITISV_005264 [Vitis vinifera]
Length = 1348
Score = 127 bits (319), Expect = 1e-26
Identities = 62/151 (41%), Positives = 96/151 (63%)
Frame = +1
Query: 1552 LPFIKSSILWGILESFEVFKFMPQQPHFRPLEQYNEELREGFAIAHVVNFNNLVGRTWNA 1731
LPF+KSS +W LE+ EVF+ MPQ+PHFRPLE EE REG AI ++V F+ L+ +
Sbjct: 1009 LPFVKSSPIWNTLETLEVFQRMPQKPHFRPLENCKEERREGLAIGNMVTFSTLIEKVAKL 1068
Query: 1732 NLDEPRIMFQNKLEALNDLEGAGFTVQPVRARLEELLRIKDSYSQLDDKSKIAETKVIEE 1911
D+PR +F + LEAL +LE GF +PV++R+ EL+ IKD QL ++K E +++E
Sbjct: 1069 RFDDPRSIFGSSLEALVELEMHGFDTKPVQSRINELVFIKDQQEQLKGRTKEVENQIMEH 1128
Query: 1912 KRKVDQVQESIKQLNIKLQTLMREKEMKTFN 2004
+ ++ E I +++ K+ L ++ + N
Sbjct: 1129 THEKTKIDEEIYEIDKKMIELQEKRALAVSN 1159
Score = 90.5 bits (223), Expect = 2e-15
Identities = 62/213 (29%), Positives = 104/213 (48%), Gaps = 7/213 (3%)
Frame = +1
Query: 19 LKETESEKLLRGYVDFAHLRPVPPKGTG-PFHLNEEVNAYNNDGWWKGVIIKILKEGSRY 195
LK + +L VD H+RP PP+ G F L E+V+A+ + GWW G++ K+L G RY
Sbjct: 245 LKNSGEAGVLDVTVDNLHIRPSPPRLEGRKFGLLEKVDAFYDYGWWNGIVTKVLT-GRRY 303
Query: 196 LVFFKPTKEELEFDLSNLRSHLDWVDGKWITSPNQETAVSSQNNGCDQFPNPTGSSALSI 375
+VFFK T E EF S+LR H++WVDGKW+ + + + + N + ++++ +
Sbjct: 304 VVFFKHTNMEKEFIHSDLRPHMEWVDGKWVGATQEVLGTTYSDEQLGLVLNNSNNTSVGM 363
Query: 376 DIALSQTLCG------ARDIMLERSSLRNMYGSVDNQSTSNGIYLPLQVLYPSQENRKKS 537
+ S T+ + E+ L ++N ++ V+ +++ K++
Sbjct: 364 QLESSGTVIDDAGDKISHSTRFEKDRLEQPATYLENSTS---------VMTSNRKKVKET 414
Query: 538 TPRSAAGALRTSKKIGKRKATDAQTFIEVFQAR 636
T A R SKK+ + DA V Q R
Sbjct: 415 TSGDDATPSRPSKKLKEGDVADAPISHAVGQLR 447
Score = 87.4 bits (215), Expect = 1e-14
Identities = 41/92 (44%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Frame = +1
Query: 13 TILKETESEKLLRGYVDFAHLRPVPPKGTGP-FHLNEEVNAYNNDGWWKGVIIKILKEGS 189
T++ E + K LR VD +RP PP+ G F L EEV+A+ +DGWW+GV+ ++L E S
Sbjct: 1250 TLMSEEDDSKPLRESVDAILVRPYPPREVGRRFKLMEEVDAFYSDGWWEGVVTQVL-ENS 1308
Query: 190 RYLVFFKPTKEELEFDLSNLRSHLDWVDGKWI 285
RY VFF+ ++E+++F +LR H +WV G W+
Sbjct: 1309 RYSVFFRTSREQIDFHQVDLRLHREWVRGNWV 1340
Score = 59.3 bits (142), Expect = 4e-06
Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Frame = +1
Query: 16 ILKETESEKLLRGYVDFAHLRPVPPKGTGP-FHLNEEVNAYNNDGWWKGVIIKILKEGSR 192
+L + + LR VD LRP+PP T F + V+ + +DGW GVII I + S+
Sbjct: 47 LLDGKDGSRRLREVVDTLFLRPLPPLETNASFGEYDIVDTFYHDGWCTGVIICI--KDSK 104
Query: 193 YLVFFKPTKEELEFDLSNLRSHLDWVDGKW 282
Y VFF + E++ D S+LR H +WV+GK+
Sbjct: 105 YTVFF--SNNEIQVDRSDLRLHKEWVNGKF 132
>ref|XP_002531983.1| RNA binding protein, putative [Ricinus communis]
gi|223528380|gb|EEF30419.1| RNA binding protein, putative
[Ricinus communis]
Length = 591
Score = 113 bits (282), Expect = 2e-22
Identities = 59/150 (39%), Positives = 91/150 (60%)
Frame = +1
Query: 1546 RRLPFIKSSILWGILESFEVFKFMPQQPHFRPLEQYNEELREGFAIAHVVNFNNLVGRTW 1725
+ +PF KSS +WG +ES EVF+ +PQ+PHF PL ++ E REG A+ H++ F LV +T
Sbjct: 405 QEMPFHKSSFVWGDIESMEVFRLLPQKPHFSPLIEFEEASREGVAMRHMMTFAMLVEKTS 464
Query: 1726 NANLDEPRIMFQNKLEALNDLEGAGFTVQPVRARLEELLRIKDSYSQLDDKSKIAETKVI 1905
+D+PR +FQ+ LE L +L GF V+ V RL LL +KD Y QL SK ++I
Sbjct: 465 KLRVDDPRNLFQSYLEILANLRLHGFDVKAVMDRLNMLLSMKDRYEQLKGPSKNGHVQLI 524
Query: 1906 EEKRKVDQVQESIKQLNIKLQTLMREKEMK 1995
E ++ +++E I + + + ++ MK
Sbjct: 525 EHNYEMMKLEEGIDKTDKTISESGEKQAMK 554