BLASTX nr result

ID: Coptis23_contig00010303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010303
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFZ78594.1| cellulose synthase-like protein [Populus tomentosa]    108   3e-22
ref|XP_002300383.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-22
gb|AFZ78595.1| cellulose synthase-like protein [Populus tomentosa]    107   8e-22
ref|XP_002307850.1| predicted protein [Populus trichocarpa] gi|2...   107   8e-22
ref|XP_003600351.1| Cellulose synthase-like protein E1 [Medicago...   107   1e-21

>gb|AFZ78594.1| cellulose synthase-like protein [Populus tomentosa]
          Length = 736

 Score =  108 bits (271), Expect = 3e-22
 Identities = 48/82 (58%), Positives = 65/82 (79%)
 Frame = -1

Query: 249 SLIVGMKMEFPGLDGFGGPLYIGTGCFHRRETLCGRKYSKEYKVEFVKSIDNRVQESINE 70
           SL V   +EF G DG+GGPLY+GTGCFHRR+TLCGR++S++ K+E+ K  D+R Q+S++E
Sbjct: 356 SLRVITNVEFHGTDGYGGPLYVGTGCFHRRDTLCGREFSQDSKIEWKKHNDHRRQQSVHE 415

Query: 69  LEEQTKILADCTSEKGTEWGKE 4
           L E+TK LA CT E+ T+WG E
Sbjct: 416 LVEETKTLASCTYEQNTKWGNE 437


>ref|XP_002300383.1| predicted protein [Populus trichocarpa] gi|222847641|gb|EEE85188.1|
           predicted protein [Populus trichocarpa]
          Length = 736

 Score =  108 bits (271), Expect = 3e-22
 Identities = 48/82 (58%), Positives = 65/82 (79%)
 Frame = -1

Query: 249 SLIVGMKMEFPGLDGFGGPLYIGTGCFHRRETLCGRKYSKEYKVEFVKSIDNRVQESINE 70
           SL V   +EF G DG+GGPLY+GTGCFHRR+TLCGR++S++ K+E+ K  D+R Q+S++E
Sbjct: 356 SLRVITNVEFHGTDGYGGPLYVGTGCFHRRDTLCGREFSQDSKIEWKKHNDHRRQQSVHE 415

Query: 69  LEEQTKILADCTSEKGTEWGKE 4
           L E+TK LA CT E+ T+WG E
Sbjct: 416 LVEETKTLASCTYEQNTKWGNE 437


>gb|AFZ78595.1| cellulose synthase-like protein [Populus tomentosa]
          Length = 732

 Score =  107 bits (268), Expect = 8e-22
 Identities = 51/83 (61%), Positives = 62/83 (74%)
 Frame = -1

Query: 249 SLIVGMKMEFPGLDGFGGPLYIGTGCFHRRETLCGRKYSKEYKVEFVKSIDNRVQESINE 70
           SL + M+++FPGLDG GGPLYIGTGCFHRRE LCGR+YS E KV++ +    +V+ES   
Sbjct: 354 SLNIEMEVDFPGLDGNGGPLYIGTGCFHRREALCGRRYSNENKVDWKEVNYRKVKESAGV 413

Query: 69  LEEQTKILADCTSEKGTEWGKEM 1
           LEE  + LA CT E  TEWGKEM
Sbjct: 414 LEEVCRNLASCTYEANTEWGKEM 436


>ref|XP_002307850.1| predicted protein [Populus trichocarpa] gi|222853826|gb|EEE91373.1|
           predicted protein [Populus trichocarpa]
          Length = 732

 Score =  107 bits (268), Expect = 8e-22
 Identities = 51/83 (61%), Positives = 62/83 (74%)
 Frame = -1

Query: 249 SLIVGMKMEFPGLDGFGGPLYIGTGCFHRRETLCGRKYSKEYKVEFVKSIDNRVQESINE 70
           SL + M+++FPGLDG GGPLYIGTGCFHRRE LCGR+YS E KV++ +    +V+ES   
Sbjct: 354 SLNIEMEVDFPGLDGNGGPLYIGTGCFHRREALCGRRYSNENKVDWKEVNYRKVKESAGV 413

Query: 69  LEEQTKILADCTSEKGTEWGKEM 1
           LEE  + LA CT E  TEWGKEM
Sbjct: 414 LEEVCRNLASCTYEANTEWGKEM 436


>ref|XP_003600351.1| Cellulose synthase-like protein E1 [Medicago truncatula]
           gi|355489399|gb|AES70602.1| Cellulose synthase-like
           protein E1 [Medicago truncatula]
          Length = 736

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/88 (57%), Positives = 68/88 (77%), Gaps = 5/88 (5%)
 Frame = -1

Query: 249 SLIVGMKMEFPGLDGFGGPLYIGTGCFHRRETLCGRKYSKEYKVEFV----KSIDNRVQ- 85
           SL+V  ++EF GLDGFGGPLYIGTGCFHRR+ LCGRKYS + K+++     ++ID+ ++ 
Sbjct: 349 SLLVAYEVEFYGLDGFGGPLYIGTGCFHRRDVLCGRKYSDQCKIDWKNVNDENIDHMIKV 408

Query: 84  ESINELEEQTKILADCTSEKGTEWGKEM 1
            S+ ELEE++K LA CT E+ T WGKEM
Sbjct: 409 ASLQELEEKSKTLASCTYEENTSWGKEM 436


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