BLASTX nr result

ID: Coptis23_contig00010299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010299
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36056.3| unnamed protein product [Vitis vinifera]               80   2e-13
ref|XP_002515962.1| conserved hypothetical protein [Ricinus comm...    80   2e-13
ref|XP_002319640.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_002328341.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11

>emb|CBI36056.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 38/59 (64%), Positives = 47/59 (79%)
 Frame = +1

Query: 103 VDSTPIWKEPESRTNIGNQPGENTLKKELWREFEAASSSSNVLRLDASVFRDTSRKGFL 279
           V+STP+WKEPES   +G +PGENTLKKELW +FEAA  S+N L L+ SVF +T+ KGFL
Sbjct: 323 VESTPLWKEPESTIRMGKRPGENTLKKELWTKFEAA--STNGLHLNVSVFEETTEKGFL 379


>ref|XP_002515962.1| conserved hypothetical protein [Ricinus communis]
           gi|223544867|gb|EEF46382.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 523

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 40/68 (58%), Positives = 48/68 (70%)
 Frame = +1

Query: 76  EPGSTSIAFVDSTPIWKEPESRTNIGNQPGENTLKKELWREFEAASSSSNVLRLDASVFR 255
           EP   S+   +STP+WKEPES    G +PGENTLKKELW +FEAASS    LRLD S  +
Sbjct: 442 EPRVNSLTLAESTPMWKEPESTMTKGKRPGENTLKKELWTKFEAASSYG--LRLDVSSLQ 499

Query: 256 DTSRKGFL 279
            T++KGFL
Sbjct: 500 RTAQKGFL 507


>ref|XP_002319640.1| predicted protein [Populus trichocarpa] gi|222858016|gb|EEE95563.1|
           predicted protein [Populus trichocarpa]
          Length = 468

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 37/59 (62%), Positives = 46/59 (77%)
 Frame = +1

Query: 103 VDSTPIWKEPESRTNIGNQPGENTLKKELWREFEAASSSSNVLRLDASVFRDTSRKGFL 279
           ++STP+WKEPES    G +PGENTLKKELW +FEAAS+     RLDAS F+ T++KGFL
Sbjct: 392 IESTPLWKEPESTIRTGKRPGENTLKKELWTKFEAASTYG--FRLDASAFQGTAQKGFL 448


>ref|XP_002328341.1| predicted protein [Populus trichocarpa] gi|222838056|gb|EEE76421.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/65 (55%), Positives = 46/65 (70%)
 Frame = +1

Query: 85  STSIAFVDSTPIWKEPESRTNIGNQPGENTLKKELWREFEAASSSSNVLRLDASVFRDTS 264
           S+S   ++STP+WKE ES    G +PGENTLKKELW +FEAAS+      L+AS F  T+
Sbjct: 428 SSSKVTIESTPLWKESESTIRTGKRPGENTLKKELWTKFEAASTYG--FCLNASAFLGTA 485

Query: 265 RKGFL 279
           +KGFL
Sbjct: 486 KKGFL 490


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