BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010298
         (976 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   270   4e-70
ref|XP_002305539.1| f-box family protein [Populus trichocarpa] g...   261   1e-67
ref|XP_002313690.1| f-box family protein [Populus trichocarpa] g...   260   4e-67
ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumi...   257   3e-66
ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumi...   257   3e-66

>ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP23-like [Vitis
           vinifera]
          Length = 387

 Score =  270 bits (690), Expect = 4e-70
 Identities = 156/332 (46%), Positives = 207/332 (62%), Gaps = 12/332 (3%)
 Frame = +3

Query: 15  EWSQLPQDLLDQITKKIQSTIDLLRFRSVCSTWRSSITYPLHTFPNKIPIRPSNFDSGL- 191
           EW+ LP+DLL  I K++ S  DLLRFRSVCS+WRSS      +  + +PI P+   S + 
Sbjct: 3   EWANLPRDLLHLIAKRLDSHFDLLRFRSVCSSWRSSTPSKPRSIFSHLPILPTTGFSEIT 62

Query: 192 --FHLSKRLILHVSSPSNQQN---EGWIIKLEQDDSNLSHLLNPLSESKIQPLPETFPKH 356
             F+LSKR IL +  P ++       W+IK+E+D S +  L+NPL+  K + LP  FPK 
Sbjct: 63  WAFYLSKRSILQLGLPDSRAQTTPNSWLIKIEEDPSGVIRLINPLTTFKFRHLPPDFPKT 122

Query: 357 FDILNLRVFELCQEYVLRYADKWPL--SFAGDVYREKVIFSPTPPWSNEMDYVIMTIHVS 530
           FD   LRVFEL QEYVL Y D  P   ++ G +Y EKV F       N  D+ ++TIH+S
Sbjct: 123 FDFSGLRVFELGQEYVLEYMDYRPPGNAYLGSLYMEKVAFCS----GNGDDFWLLTIHLS 178

Query: 531 GKLALFRLKDNVWSIIDEMPNPYEDVIHFKGRFYAVDGTGRAVVV----AADLTISEVAG 698
           GKLA+FR  D  W IID+M +PY+DVI F G+FYAVD TGR VVV     +   ++  A 
Sbjct: 179 GKLAMFRSGDKKWMIIDDMQSPYDDVIFFDGKFYAVDNTGRTVVVDVADGSSPVVNLAAS 238

Query: 699 PVFGGDKKYLVEMDGELLLVDRYLKNGNDDLNFWNDNEIYVPNDDTYVMDTTLLFIVYRL 878
            VFGGDKK LVE +GELLLVD Y    +DD     D  +       ++++  + F V+RL
Sbjct: 239 SVFGGDKKVLVESEGELLLVDTYFTMYHDD-----DEHV------RWMIERMIHFKVFRL 287

Query: 879 DKWEKTWVELKTLGDRLLFLSDNCSFCAPASD 974
           D+ E+ WVE+++LGDRLLFL D+ SF A ASD
Sbjct: 288 DQREQKWVEIESLGDRLLFLGDDSSFSARASD 319


>ref|XP_002305539.1| f-box family protein [Populus trichocarpa]
           gi|222848503|gb|EEE86050.1| f-box family protein
           [Populus trichocarpa]
          Length = 469

 Score =  261 bits (668), Expect = 1e-67
 Identities = 149/333 (44%), Positives = 213/333 (63%), Gaps = 13/333 (3%)
 Frame = +3

Query: 15  EWSQLPQDLLDQITKKIQSTIDLLRFRSVCSTWRSSIT-YPLHTFPNKIPIRPSNFDSGL 191
           EW+ LP+DL++ I+K++ ++ DLLRFRSVC++WRSSI   P     N   I P++  S  
Sbjct: 3   EWTHLPKDLMELISKRLDTSTDLLRFRSVCNSWRSSIPPEPPCLSSNTFKILPNDGISHT 62

Query: 192 ---FHLSKRLILHVSSPSNQQN---EGWIIKLEQDDSNLSHLLNPLSESKIQPLPETFPK 353
              F L KR +  V  P++      +GW+IK+E+D     HL +PLS  +   LP   P+
Sbjct: 63  SFGFSLFKRTVFLVGLPNSHNQTDTQGWLIKIEEDVPGKKHLFDPLSRCRSTSLPNNLPR 122

Query: 354 HFDILNLRVFELCQEYVLRYADKWPLSF----AGDVYREKVIFSPTPPWSNEM-DYVIMT 518
             D++NLR+ EL  EYVL + +  P S     AG++Y EKV+      W N + ++V++T
Sbjct: 123 VLDLMNLRIRELGHEYVLHHLNYKPNSSSFTDAGNLYMEKVVMI----WLNSLTEFVLLT 178

Query: 519 IHVSGKLALFRLKDNVWSIIDEMPNPYEDVIHFKGRFYAVDGTGRAVVVAADLTISEVAG 698
           IHVSGKLA+F+  D  W+II+EMP+P++DVI +KGRFYAVD TGR VVVA D  +  V  
Sbjct: 179 IHVSGKLAIFKSGDKRWTIINEMPSPFDDVIVYKGRFYAVDNTGRTVVVAMDTNLGLVGN 238

Query: 699 PVFGGDKKYLVEMDGELLLVDRYLKNGNDD-LNFWNDNEIYVPNDDTYVMDTTLLFIVYR 875
           PVFGGDKKYLVE  G+LLLVD YL   +D+ L+  +D    V +   Y+ + T+ F V++
Sbjct: 239 PVFGGDKKYLVESKGDLLLVDMYLSIDSDEGLSIGHD---VVQDLVQYMSERTVWFKVFK 295

Query: 876 LDKWEKTWVELKTLGDRLLFLSDNCSFCAPASD 974
           L++  K W+E+  L DR+LFL D+ +F A AS+
Sbjct: 296 LNEEGKCWIEVNDLEDRVLFLGDDLTFSASASE 328


>ref|XP_002313690.1| f-box family protein [Populus trichocarpa]
           gi|222850098|gb|EEE87645.1| f-box family protein
           [Populus trichocarpa]
          Length = 410

 Score =  260 bits (664), Expect = 4e-67
 Identities = 151/340 (44%), Positives = 213/340 (62%), Gaps = 20/340 (5%)
 Frame = +3

Query: 15  EWSQLPQDLLDQITKKIQSTIDLLRFRSVCSTWRSSITYPLHTFPNKIPIRPSNF----- 179
           EW+ LP+DL++ I+K + ++ DLLRFRSVC++WRSSI       P K P   SN      
Sbjct: 3   EWTHLPKDLIELISKCLDTSTDLLRFRSVCNSWRSSI-------PPKSPRLSSNTFKILP 55

Query: 180 DSGLFHLS------KRLILHVSSPSNQQN---EGWIIKLEQDDSNLSHLLNPLSESKIQP 332
           + G+ H S      KR I  +  P++      +GW++K+E+D     HL +PLS  +   
Sbjct: 56  NDGISHTSFGFSLFKRSIFLIGLPNSHNQTDLQGWLVKIEEDVPGKKHLFDPLSRCRSTS 115

Query: 333 LPETFPKHFDILNLRVFELCQEYVLRYADKWPLSF----AGDVYREKVIFSPTPPWSN-E 497
           L  + P+  D++NLR+ EL  EYVL +    P S     AG++Y EKV+      W N E
Sbjct: 116 LHHSLPRVLDLMNLRIRELGHEYVLHHVSYKPNSSSFTDAGNLYMEKVVMI----WLNCE 171

Query: 498 MDYVIMTIHVSGKLALFRLKDNVWSIIDEMPNPYEDVIHFKGRFYAVDGTGRAVVVAADL 677
            ++V++TIHVSGKLA+F+  D  W+II+EMP+P++DVI +KGRFYAVD TGR VVVA D 
Sbjct: 172 TEFVLLTIHVSGKLAMFKSGDKRWTIINEMPSPFDDVIVYKGRFYAVDNTGRTVVVALDT 231

Query: 678 TISEVAGPVFGGDKKYLVEMDGELLLVDRYLKNGNDD-LNFWNDNEIYVPNDDTYVMDTT 854
            +  V  PVFGGDKKYLVE  G+LLLVD YL    D+ L+  ND    V +   Y+ + T
Sbjct: 232 DLGLVGDPVFGGDKKYLVESKGDLLLVDMYLSIDTDEGLSIGND---VVQDLVQYMSERT 288

Query: 855 LLFIVYRLDKWEKTWVELKTLGDRLLFLSDNCSFCAPASD 974
           + F V++L++  K+W+E+K L DR+LFL D+ +F A AS+
Sbjct: 289 VRFKVFKLNEEGKSWIEVKNLEDRVLFLGDDSTFSASASE 328


>ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
          Length = 458

 Score =  257 bits (656), Expect = 3e-66
 Identities = 144/327 (44%), Positives = 208/327 (63%), Gaps = 8/327 (2%)
 Frame = +3

Query: 15  EWSQLPQDLLDQITKKIQSTIDLLRFRSVCSTWRSSITYPLHTFPNKIPIRPSNFDSGL- 191
           EWS LP+DLL  I++++Q+  D +RFRSVCS+WRS ++   HT P + P  P++  S   
Sbjct: 3   EWSHLPKDLLYLISQRLQNPFDTMRFRSVCSSWRSVVSPKRHTLPVRFPFLPNHGISDPT 62

Query: 192 --FHLSKRLILHVSSPSNQQNEGWIIKLEQDDSNLSHLLNPLSESKIQPLPETFPKHFDI 365
             F+L+KR I  V SP +  ++GW+IK+E+D   +  + NPLS+S  +PLP+ FPK  ++
Sbjct: 63  WGFNLTKRSIFRVGSPMDH-SDGWLIKVEEDACGMIKISNPLSKSYFKPLPKNFPKVLNL 121

Query: 366 LNLRVFELCQEYVLRYADKWPLSF----AGDVYREKVIFSPTPPWSNEMDYVIMTIHVSG 533
           LN  V ELCQEYVL Y + WP+      AGD+YREK+ +       ++  +V++TIHVSG
Sbjct: 122 LNFPVLELCQEYVLHYLNFWPVRHRPGDAGDLYREKIAYKCLNYDGSQ--FVLVTIHVSG 179

Query: 534 KLALFRLKDNVWSIIDEMPNPYEDVIHFKGRFYAVDGTGRAVVVAADLTISEVAGPVFGG 713
           KLA+F+ +D  WS I     PY+DVI F G FYAVD +G   +V +   ++ +A PVFGG
Sbjct: 180 KLAMFKSEDGQWSTIHHTALPYDDVILFNGEFYAVDNSGATFLVESQHKVTLIAEPVFGG 239

Query: 714 DKKYLVEMDGELLLVDRYLKNGNDDLNFWNDNEIYVPNDDTYVMDTTLLFIVYRLDK-WE 890
           DKK L+E +GELLLVD YL   +++  F  D E   P +   + + T+ F V++L +   
Sbjct: 240 DKKILMECNGELLLVDMYLTVDSEE-GFGLDGE---PTEGV-LHEKTVGFKVFKLHRNGS 294

Query: 891 KTWVELKTLGDRLLFLSDNCSFCAPAS 971
           K W  +  LG+ +LFL +NCSF A AS
Sbjct: 295 KKWTVVCDLGNTMLFLGENCSFSASAS 321


>ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
          Length = 404

 Score =  257 bits (656), Expect = 3e-66
 Identities = 144/327 (44%), Positives = 208/327 (63%), Gaps = 8/327 (2%)
 Frame = +3

Query: 15  EWSQLPQDLLDQITKKIQSTIDLLRFRSVCSTWRSSITYPLHTFPNKIPIRPSNFDSGL- 191
           EWS LP+DLL  I++++Q+  D +RFRSVCS+WRS ++   HT P + P  P++  S   
Sbjct: 3   EWSHLPKDLLYLISQRLQNPFDTMRFRSVCSSWRSVVSPKRHTLPVRFPFLPNHGISDPT 62

Query: 192 --FHLSKRLILHVSSPSNQQNEGWIIKLEQDDSNLSHLLNPLSESKIQPLPETFPKHFDI 365
             F+L+KR I  V SP +  ++GW+IK+E+D   +  + NPLS+S  +PLP+ FPK  ++
Sbjct: 63  WGFNLTKRSIFRVGSPMDH-SDGWLIKVEEDACGMIKISNPLSKSYFKPLPKNFPKVLNL 121

Query: 366 LNLRVFELCQEYVLRYADKWPLSF----AGDVYREKVIFSPTPPWSNEMDYVIMTIHVSG 533
           LN  V ELCQEYVL Y + WP+      AGD+YREK+ +       ++  +V++TIHVSG
Sbjct: 122 LNFPVLELCQEYVLHYLNFWPVRHRPGDAGDLYREKIAYKCLNYDGSQ--FVLVTIHVSG 179

Query: 534 KLALFRLKDNVWSIIDEMPNPYEDVIHFKGRFYAVDGTGRAVVVAADLTISEVAGPVFGG 713
           KLA+F+ +D  WS I     PY+DVI F G FYAVD +G   +V +   ++ +A PVFGG
Sbjct: 180 KLAMFKSEDGQWSTIHHTALPYDDVILFNGEFYAVDNSGATFLVESQHKVTLIAEPVFGG 239

Query: 714 DKKYLVEMDGELLLVDRYLKNGNDDLNFWNDNEIYVPNDDTYVMDTTLLFIVYRLDK-WE 890
           DKK L+E +GELLLVD YL   +++  F  D E   P +   + + T+ F V++L +   
Sbjct: 240 DKKILMECNGELLLVDMYLTVDSEE-GFGLDGE---PTEGV-LHEKTVGFKVFKLHRNGS 294

Query: 891 KTWVELKTLGDRLLFLSDNCSFCAPAS 971
           K W  +  LG+ +LFL +NCSF A AS
Sbjct: 295 KKWTVVCDLGNTMLFLGENCSFSASAS 321