BLASTX nr result

ID: Coptis23_contig00010284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010284
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553721.1| PREDICTED: uncharacterized protein LOC100805...    58   1e-06

>ref|XP_003553721.1| PREDICTED: uncharacterized protein LOC100805944 [Glycine max]
          Length = 1075

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 44/183 (24%), Positives = 72/183 (39%), Gaps = 35/183 (19%)
 Frame = -2

Query: 551 SNTYWPGSIIKRV-----------NGKLLVSFFDCKTTNWIYDSEIRYFENNYMPIMLDI 405
           S+ +WPG +                G +LV+FF   +  W    E+  F+ N+       
Sbjct: 88  SHPWWPGHLYNEAFASPSVRRSKHEGHVLVAFFGDSSYGWFEPEELIPFDANFAEKSQQT 147

Query: 404 GGMKLRNAIDCALNEFVNRLTLEYSCACENDGNQGR----------------GGLL---- 285
                  A++ A++E   R  L  +C C N  N                   GGL     
Sbjct: 148 NSRTFLRAVEEAVDEACRRRWLGLACRCRNPENFSATDVEGYFCVDVEDYEPGGLYSDGQ 207

Query: 284 ----KKVFEPVEALAFVCRMAVSPFFDGVDSVGVIKGVAQVNAFRRCVFIKRDWIYRDTM 117
               +  F+P E LAFV ++A++P  D   S+G     A ++A+R+ VF + D  Y    
Sbjct: 208 IRKARDSFKPSETLAFVKQLAIAPHDDDQGSIGFSNNKATLSAYRKAVFEQFDETYAQAF 267

Query: 116 RIE 108
            ++
Sbjct: 268 GVQ 270


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