BLASTX nr result

ID: Coptis23_contig00010281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010281
         (2920 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284247.1| PREDICTED: uncharacterized protein LOC100250...   244   7e-62
ref|XP_002331165.1| predicted protein [Populus trichocarpa] gi|2...   229   4e-57
ref|XP_003534205.1| PREDICTED: uncharacterized protein LOC100799...   203   2e-49
ref|XP_003529991.1| PREDICTED: uncharacterized protein LOC100817...   193   3e-46
gb|AFK42565.1| unknown [Medicago truncatula]                          187   2e-44

>ref|XP_002284247.1| PREDICTED: uncharacterized protein LOC100250827 [Vitis vinifera]
          Length = 360

 Score =  244 bits (624), Expect = 7e-62
 Identities = 145/319 (45%), Positives = 168/319 (52%), Gaps = 10/319 (3%)
 Frame = +3

Query: 1797 RPDFDGSIDQHVMRAGSVSPLRQRKLDDRYRSDFDTXXXXXXXXXXXXXXXXXXXXXXXX 1976
            R D  G    + +RAGS SP+R+R  D RY S+FD                         
Sbjct: 50   RSDRFGDGPGYRIRAGSSSPVRRRNPDHRYNSEFDHSGGLPRSRGFGSERDPGRYRNHSP 109

Query: 1977 XXXXXXXXXXXXXXDFNVRGFGRGSFRNDGMTRNSANVAPRDGDWVCPALSCGNLNFARR 2156
                            +  GFG G  R++G+ RN+ NV PR+GDWVCP   CGNLNFARR
Sbjct: 110  PYGRGRGGGRSFGRGLDGPGFGPGPIRSEGI-RNNPNVRPREGDWVCPDPLCGNLNFARR 168

Query: 2157 EYCNKCNRPRLGAGGSPRRNYLGPP-------RFSGPPLDRSPVRGGLNXXXXXXXXXXX 2315
            E CN CNR R G G SPRR + GPP       RFSGPP+DRSP  G              
Sbjct: 169  EQCNNCNRYREGPGESPRRGFPGPPPPHPPPRRFSGPPMDRSP--GRTMNGYRSPPRGWA 226

Query: 2316 XXXXXEFRDG-PPHIRHGGRFPDPHIRRDRQEYPXXXXXXXXXXXXPVPPDWGERERGRD 2492
                 EF  G P H RH GRFPD ++RRDR +YP            P PPDWG R+RGRD
Sbjct: 227  RDGPREFGGGAPSHRRHDGRFPDHNMRRDRLDYPEDDYRERNKFDRPAPPDWGHRDRGRD 286

Query: 2493 GFFNG-RRAYDARSERRPLSPPPQALPSRDRWAHQVRERSRSPMMGG-PLKDQRQDSYVD 2666
             FFN  R+ Y    ERRP SPPP  LP R RW   VR RSRSP+ GG PLKD R+D Y+ 
Sbjct: 287  SFFNNERKGY----ERRPPSPPPPPLPPRGRWGRDVRARSRSPVRGGPPLKDYRRDMYMG 342

Query: 2667 RGRGPRWGLPRDRFDDHPY 2723
            RGR  R G+ RDRF + PY
Sbjct: 343  RGRDDRHGIRRDRFGE-PY 360


>ref|XP_002331165.1| predicted protein [Populus trichocarpa] gi|222873248|gb|EEF10379.1|
            predicted protein [Populus trichocarpa]
          Length = 333

 Score =  229 bits (583), Expect = 4e-57
 Identities = 130/301 (43%), Positives = 156/301 (51%), Gaps = 10/301 (3%)
 Frame = +3

Query: 1833 MRAGSVSPLRQRKLDDRYRSDFDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2012
            +RAGS SP+R+R  D RY SDFD                                     
Sbjct: 33   LRAGSGSPVRRRDADRRYSSDFDNSGAPPRGRDFSNGRDRGRFRDSSPPYARGRGGGRPL 92

Query: 2013 XXDFNVRGFGRGSFRNDGMTRNSANVAPRDGDWVCPALSCGNLNFARREYCNKCNRPRLG 2192
               F+  GFG G  R +G++RN+ NV PR+GDW+C    CGNLNFARREYCN C RPR  
Sbjct: 93   GRGFDGPGFGPGPLRGEGVSRNNPNVRPREGDWICSDPLCGNLNFARREYCNNCKRPRYR 152

Query: 2193 AGGSPRRNYLGPP-------RFSGPPLDRSPVRGGLNXXXXXXXXXXXXXXXXEFRDGPP 2351
             GGSPRR Y GPP       RF GPPLD SP R  +N                    GPP
Sbjct: 153  PGGSPRRGYPGPPPPHAPPRRFPGPPLDLSPGR-TMNGYRSPPRGWSRDGPRDFGPGGPP 211

Query: 2352 HIRHGGRFPDPHIRRDRQEYPXXXXXXXXXXXXPVPPDWGERERGRDGFFNGRRAYDARS 2531
              R GGRF D  +RR+R +YP            P+P DWG ++RGRDG FN R+ +    
Sbjct: 212  PPRQGGRFSDHDMRRERSDYPDDEYRVRNKFDRPMPMDWGHKDRGRDGLFNERKGF---- 267

Query: 2532 ERRPLSP--PPQALPSRDRWAHQVRERSRSPMMGG-PLKDQRQDSYVDRGRGPRWGLPRD 2702
            ERRP SP  PP +LP R RW    R+RSRSP+ G  P K+ RQD Y++RGR  R  + RD
Sbjct: 268  ERRPPSPPLPPPSLPQRGRWGRDGRDRSRSPIRGAPPPKEFRQDMYMERGRDDRHPVGRD 327

Query: 2703 R 2705
            R
Sbjct: 328  R 328


>ref|XP_003534205.1| PREDICTED: uncharacterized protein LOC100799651 [Glycine max]
          Length = 369

 Score =  203 bits (516), Expect = 2e-49
 Identities = 125/319 (39%), Positives = 158/319 (49%), Gaps = 13/319 (4%)
 Frame = +3

Query: 1788 DRYRPDFDGSIDQHVMRAGSVSPLRQRKLDDRYRSDFDTXXXXXXXXXXXXXXXXXXXXX 1967
            DRY PD  G    + +RAGS SP+ +R  D R+ SD++                      
Sbjct: 59   DRY-PDEPG----YRIRAGSSSPVHRRDADHRFGSDYNNMPRSRGYGGGRDPGRYRDPSP 113

Query: 1968 XXXXXXXXXXXXXXXXXDFNVRGFGRGSFRNDGMTRNSANVAPRDGDWVCPALSCGNLNF 2147
                              F+  GF  G  R +G  RN+ NV PR+GDW+CP   C NLNF
Sbjct: 114  SYGRGRVGGRPMGRA---FDGPGFVSGLARGEGNNRNNPNVRPREGDWICPDPLCNNLNF 170

Query: 2148 ARREYCNKCNRPRLGAGGSPRRNYLGPP-------RFSGPPLDRSPVRGGLNXXXXXXXX 2306
            ARR++CN CNR R     SPRR Y  PP       RF GPP+DRSP R  LN        
Sbjct: 171  ARRDHCNSCNRSRNAPARSPRRAYPAPPPLHAPPRRFPGPPIDRSPER-TLNGYRSPPRG 229

Query: 2307 XXXXXXXXEFRDGPPHIRHGGRFPDPHIRRDRQEYPXXXXXXXXXXXXPVPPDWGERERG 2486
                          P +RH G+FPDPH+RR+R ++             P PPDW  R+RG
Sbjct: 230  LARNGPREYGSAALPPLRHEGKFPDPHLRRERMDFIEDAYRGRNKFDRPPPPDWDNRDRG 289

Query: 2487 RDGFFNGRRAYDARSERRPLSPPPQALPS-----RDRWAHQVRERSRSPMMGG-PLKDQR 2648
            RDGF +  + +    ERRPLSPPP  LPS       RWA  VR+RSRSP+ GG P K+ R
Sbjct: 290  RDGFSDEGKGF----ERRPLSPPPPLLPSLPHHRGGRWARDVRQRSRSPIRGGPPPKEYR 345

Query: 2649 QDSYVDRGRGPRWGLPRDR 2705
            +D+++ R    R G+ RDR
Sbjct: 346  RDTFMHRATDDRRGMGRDR 364


>ref|XP_003529991.1| PREDICTED: uncharacterized protein LOC100817587 [Glycine max]
          Length = 363

 Score =  193 bits (490), Expect = 3e-46
 Identities = 128/330 (38%), Positives = 160/330 (48%), Gaps = 24/330 (7%)
 Frame = +3

Query: 1788 DRYRPDFDGSIDQHVMRAGSVSPLRQRKLDDRYRSDFDTXXXXXXXXXXXXXXXXXXXXX 1967
            DRY PD  G    + +RAGS SP+ +R  D R+ SD++                      
Sbjct: 60   DRY-PDEPG----YRIRAGSSSPVHRRDADRRFASDYNNLSRSRGYGGGRDPGRYRDPSP 114

Query: 1968 XXXXXXXXXXXXXXXXXDFNVRGFGRGSFRNDGMTRNSANVAPRDGDWVCPALSCGNLNF 2147
                                 R  G G  R +G  RN+ NV PR+GDW+CP   C NLNF
Sbjct: 115  PYGRGRVGG------------RPMGSGLARGEGNNRNNPNVRPREGDWICPDPLCNNLNF 162

Query: 2148 ARREYCNKCNRPRLGAGGSPRRNYLGPP-------RFSGPPLDRSPVRGGLNXXXXXXXX 2306
            ARR++CN CNR R     SPRR++  PP       RF GP +DRSP R  LN        
Sbjct: 163  ARRDHCNSCNRSRNAPARSPRRSFPAPPPLHAPPRRFPGPLIDRSPER-TLNGYRSPRGL 221

Query: 2307 XXXXXXXXEFRDGP--------PHIRHGGRFPDPHIRRDRQEYPXXXXXXXXXXXXPVPP 2462
                      RDGP        P +RH GRFPDPH+RR+R ++             P P 
Sbjct: 222  A---------RDGPREYGSAALPPLRHEGRFPDPHVRRERMDFIEDAYRGRNKFDRPPPL 272

Query: 2463 DWGERERGRDGFFNGRRAYDARSERRPLSPPPQALPS-----RDRWAHQVRERSRSPMMG 2627
            DW  R+RGRDGF + R+ +    ERRPLSPP   LPS       RWA  VRERSRSP+ G
Sbjct: 273  DWDNRDRGRDGFSDERKGF----ERRPLSPPVPFLPSLPHHRGGRWARDVRERSRSPIRG 328

Query: 2628 G-PLKDQRQDSYVDRGRG---PRWGLPRDR 2705
            G P K+ R+D+++ R R     R G+ RDR
Sbjct: 329  GPPPKEYRRDTFMHRARDDRHDRHGMGRDR 358


>gb|AFK42565.1| unknown [Medicago truncatula]
          Length = 379

 Score =  187 bits (474), Expect = 2e-44
 Identities = 107/245 (43%), Positives = 132/245 (53%), Gaps = 17/245 (6%)
 Frame = +3

Query: 2022 FNVRGFGRGSFRNDGMT-RNSANVAPRDGDWVCPALSCGNLNFARREYCNKCNRPRLGAG 2198
            F+  G+G    R +G+  RN+ NV PR+GDW+CP   CGNLNFARR++CN+C RPR  A 
Sbjct: 134  FDGPGYGHRHGRGEGLHGRNNPNVRPREGDWMCPDALCGNLNFARRDFCNQCKRPRPAAA 193

Query: 2199 GSPRRN-----YLGPPRFSGPPLDRSPVR--GGLNXXXXXXXXXXXXXXXXEFRDGPPHI 2357
            GSP R      +  P R+ GPP DRSP R   G                        P +
Sbjct: 194  GSPPRRGSPPLHAPPRRYPGPPFDRSPERPMNGYRSPPPRLMGRDGLRDYGPAAAALPPL 253

Query: 2358 RHGGRFPDPHIRRDRQEYPXXXXXXXXXXXXPVPPDWGERERGRDGFFNGRRAYDARSER 2537
            RH GRFPDPH+ R+R +Y             P P DW  R+RGRDGF N R+ +    ER
Sbjct: 254  RHEGRFPDPHLHRERMDYMDDAYRGRGKFDRPPPLDWDNRDRGRDGFSNERKGF----ER 309

Query: 2538 RPLSPPPQALPS------RDRWAHQVRERSRSPMMGG-PLKDQRQDSYVDRG--RGPRWG 2690
            RPLSP    LPS       DRW+  VR+RSRSP+ GG P KD R+D  + RG     R G
Sbjct: 310  RPLSPSAPLLPSLPPHRGGDRWSRDVRDRSRSPIRGGPPAKDYRRDPVMSRGGRDDRRGG 369

Query: 2691 LPRDR 2705
            + RDR
Sbjct: 370  VGRDR 374


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